EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000034307 (Gene tree)
Gene ID: 108305815
Gene Symbol: -
Alias: -
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 18170 bases
Position: chrKV389492.1:6555726-6573895
Accession: 108305815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000032631	tRNA_anti-codon	PF01336.25	2.7e-14	1	1
ENSCCAP00000032647	tRNA_anti-codon	PF01336.25	2.8e-14	1	1
ENSCCAP00000032620	tRNA_anti-codon	PF01336.25	3.1e-14	1	1
ENSCCAP00000032631	tRNA-synt_2	PF00152.20	1.5e-80	1	1
ENSCCAP00000032647	tRNA-synt_2	PF00152.20	1.5e-80	1	1
ENSCCAP00000032620	tRNA-synt_2	PF00152.20	1.7e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000050417	-	375	-	ENSCCAP00000032659	124 (aa)	-	A0A2K5RWW6
ENSCCAT00000050378	-	2227	XM_017530592	ENSCCAP00000032620	625 (aa)	XP_017386081	A0A2K5RWX4
ENSCCAT00000050414	-	204	-	ENSCCAP00000032656	67 (aa)	-	A0A2K5RX45
ENSCCAT00000050405	-	1803	-	ENSCCAP00000032647	600 (aa)	-	A0A2K5RWX3
ENSCCAT00000050389	-	2141	XM_017530593	ENSCCAP00000032631	597 (aa)	XP_017386082	A0A2K5RX24

Gene Model

Click here to download ENSCCAG00000034307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000034307	-	92	81.170	ENSCCAG00000030337	-	100	80.550

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034307	-	100	97.440	ENSG00000065427	KARS	100	98.039	Homo_sapiens
ENSCCAG00000034307	-	97	80.034	ENSAPOG00000010997	kars	98	79.690	Acanthochromis_polyacanthus
ENSCCAG00000034307	-	100	92.960	ENSAMEG00000005347	KARS	100	92.960	Ailuropoda_melanoleuca
ENSCCAG00000034307	-	97	73.208	ENSACIG00000000304	kars	99	75.433	Amphilophus_citrinellus
ENSCCAG00000034307	-	94	82.290	ENSAOCG00000012971	kars	97	81.105	Amphiprion_ocellaris
ENSCCAG00000034307	-	96	81.611	ENSAPEG00000011144	kars	98	81.611	Amphiprion_percula
ENSCCAG00000034307	-	98	78.741	ENSATEG00000004954	kars	99	78.741	Anabas_testudineus
ENSCCAG00000034307	-	91	85.397	ENSAPLG00000012705	KARS	97	85.874	Anas_platyrhynchos
ENSCCAG00000034307	-	96	81.771	ENSACAG00000007577	KARS	96	77.236	Anolis_carolinensis
ENSCCAG00000034307	-	100	98.995	ENSANAG00000030403	-	100	98.995	Aotus_nancymaae
ENSCCAG00000034307	-	99	82.323	ENSANAG00000031739	-	99	80.737	Aotus_nancymaae
ENSCCAG00000034307	-	96	81.185	ENSACLG00000001613	kars	97	79.966	Astatotilapia_calliptera
ENSCCAG00000034307	-	97	80.034	ENSAMXG00000030719	kars	99	80.034	Astyanax_mexicanus
ENSCCAG00000034307	-	100	93.970	ENSBTAG00000015677	KARS	77	93.467	Bos_taurus
ENSCCAG00000034307	-	96	59.689	WBGene00002238	kars-1	99	62.840	Caenorhabditis_elegans
ENSCCAG00000034307	-	100	98.827	ENSCJAG00000014213	KARS	100	98.827	Callithrix_jacchus
ENSCCAG00000034307	-	100	93.120	ENSCAFG00000020069	KARS	100	93.120	Canis_familiaris
ENSCCAG00000034307	-	100	93.970	ENSCAFG00020001721	KARS	100	93.970	Canis_lupus_dingo
ENSCCAG00000034307	-	96	93.217	ENSCHIG00000016073	-	95	92.522	Capra_hircus
ENSCCAG00000034307	-	100	94.472	ENSCHIG00000014108	-	100	93.802	Capra_hircus
ENSCCAG00000034307	-	100	94.807	ENSTSYG00000001643	KARS	100	94.472	Carlito_syrichta
ENSCCAG00000034307	-	100	88.000	ENSCAPG00000016234	KARS	100	87.040	Cavia_aperea
ENSCCAG00000034307	-	100	95.142	ENSCPOG00000012036	KARS	100	94.137	Cavia_porcellus
ENSCCAG00000034307	-	99	95.974	ENSCATG00000038129	KARS	99	95.974	Cercocebus_atys
ENSCCAG00000034307	-	100	95.142	ENSCLAG00000007905	KARS	100	95.142	Chinchilla_lanigera
ENSCCAG00000034307	-	100	95.840	ENSCSAG00000003664	KARS	100	95.840	Chlorocebus_sabaeus
ENSCCAG00000034307	-	82	96.360	ENSCHOG00000013447	KARS	82	96.360	Choloepus_hoffmanni
ENSCCAG00000034307	-	97	85.517	ENSCPBG00000026969	KARS	100	84.202	Chrysemys_picta_bellii
ENSCCAG00000034307	-	87	73.129	ENSCPBG00000002553	-	94	73.410	Chrysemys_picta_bellii
ENSCCAG00000034307	-	95	68.783	ENSCING00000009513	-	97	68.772	Ciona_intestinalis
ENSCCAG00000034307	-	53	70.846	ENSCSAVG00000001136	-	98	74.510	Ciona_savignyi
ENSCCAG00000034307	-	95	68.959	ENSCSAVG00000007684	-	100	66.494	Ciona_savignyi
ENSCCAG00000034307	-	100	92.480	ENSCANG00000032813	KARS	100	92.480	Colobus_angolensis_palliatus
ENSCCAG00000034307	-	100	93.813	ENSCGRG00001004055	KARS	100	93.311	Cricetulus_griseus_chok1gshd
ENSCCAG00000034307	-	100	93.813	ENSCGRG00000014242	KARS	100	93.311	Cricetulus_griseus_crigri
ENSCCAG00000034307	-	96	81.533	ENSCSEG00000008324	kars	98	81.185	Cynoglossus_semilaevis
ENSCCAG00000034307	-	96	79.965	ENSCVAG00000019686	kars	98	80.139	Cyprinodon_variegatus
ENSCCAG00000034307	-	97	82.322	ENSDARG00000103799	kars	99	85.770	Danio_rerio
ENSCCAG00000034307	-	100	95.520	ENSDNOG00000002241	KARS	100	95.520	Dasypus_novemcinctus
ENSCCAG00000034307	-	100	72.529	ENSDORG00000024214	-	100	72.529	Dipodomys_ordii
ENSCCAG00000034307	-	100	94.975	ENSDORG00000004780	-	100	94.975	Dipodomys_ordii
ENSCCAG00000034307	-	95	69.002	FBgn0027084	LysRS	98	69.352	Drosophila_melanogaster
ENSCCAG00000034307	-	100	91.054	ENSETEG00000008353	KARS	100	91.054	Echinops_telfairi
ENSCCAG00000034307	-	96	71.304	ENSEBUG00000001284	-	97	71.304	Eptatretus_burgeri
ENSCCAG00000034307	-	100	95.492	ENSEASG00005013497	KARS	100	94.825	Equus_asinus_asinus
ENSCCAG00000034307	-	100	95.492	ENSECAG00000013424	KARS	100	94.825	Equus_caballus
ENSCCAG00000034307	-	97	85.878	ENSEEUG00000007042	KARS	100	84.160	Erinaceus_europaeus
ENSCCAG00000034307	-	94	74.464	ENSELUG00000014575	kars	95	74.061	Esox_lucius
ENSCCAG00000034307	-	98	95.540	ENSFCAG00000008573	KARS	100	94.975	Felis_catus
ENSCCAG00000034307	-	100	81.531	ENSFALG00000002543	KARS	100	81.364	Ficedula_albicollis
ENSCCAG00000034307	-	100	95.645	ENSFDAG00000007155	KARS	100	95.645	Fukomys_damarensis
ENSCCAG00000034307	-	96	80.035	ENSFHEG00000006172	kars	98	79.860	Fundulus_heteroclitus
ENSCCAG00000034307	-	96	77.643	ENSGMOG00000002633	kars	93	77.643	Gadus_morhua
ENSCCAG00000034307	-	100	83.082	ENSGALG00000000907	KARS	99	84.575	Gallus_gallus
ENSCCAG00000034307	-	97	80.034	ENSGAFG00000017252	kars	99	80.207	Gambusia_affinis
ENSCCAG00000034307	-	94	80.565	ENSGACG00000015749	kars	94	80.565	Gasterosteus_aculeatus
ENSCCAG00000034307	-	89	72.045	ENSGAGG00000011960	-	95	74.455	Gopherus_agassizii
ENSCCAG00000034307	-	97	85.690	ENSGAGG00000023836	KARS	99	84.175	Gopherus_agassizii
ENSCCAG00000034307	-	100	97.280	ENSGGOG00000005515	KARS	100	97.280	Gorilla_gorilla
ENSCCAG00000034307	-	96	81.185	ENSHBUG00000013619	kars	97	79.966	Haplochromis_burtoni
ENSCCAG00000034307	-	100	94.975	ENSHGLG00000011898	KARS	100	95.321	Heterocephalus_glaber_female
ENSCCAG00000034307	-	99	78.073	ENSHGLG00000001298	-	99	78.073	Heterocephalus_glaber_female
ENSCCAG00000034307	-	100	84.925	ENSHGLG00000015235	-	100	84.925	Heterocephalus_glaber_female
ENSCCAG00000034307	-	100	94.975	ENSHGLG00100012264	KARS	100	94.975	Heterocephalus_glaber_male
ENSCCAG00000034307	-	99	77.907	ENSHGLG00100006466	-	99	77.907	Heterocephalus_glaber_male
ENSCCAG00000034307	-	100	84.757	ENSHGLG00100012523	-	100	84.757	Heterocephalus_glaber_male
ENSCCAG00000034307	-	96	80.560	ENSHCOG00000002900	kars	95	79.861	Hippocampus_comes
ENSCCAG00000034307	-	97	79.690	ENSIPUG00000009862	kars	99	79.690	Ictalurus_punctatus
ENSCCAG00000034307	-	100	95.477	ENSSTOG00000004205	KARS	100	95.477	Ictidomys_tridecemlineatus
ENSCCAG00000034307	-	100	92.965	ENSJJAG00000020406	Kars	100	92.965	Jaculus_jaculus
ENSCCAG00000034307	-	97	81.109	ENSKMAG00000006434	kars	99	81.109	Kryptolebias_marmoratus
ENSCCAG00000034307	-	94	80.995	ENSLBEG00000026537	kars	98	76.451	Labrus_bergylta
ENSCCAG00000034307	-	100	79.073	ENSLACG00000006667	KARS	100	79.712	Latimeria_chalumnae
ENSCCAG00000034307	-	85	74.111	ENSLACG00000016399	-	99	74.111	Latimeria_chalumnae
ENSCCAG00000034307	-	96	81.850	ENSLOCG00000004002	kars	98	81.850	Lepisosteus_oculatus
ENSCCAG00000034307	-	88	70.342	ENSLOCG00000013608	-	93	71.401	Lepisosteus_oculatus
ENSCCAG00000034307	-	100	93.120	ENSLAFG00000015340	KARS	100	93.120	Loxodonta_africana
ENSCCAG00000034307	-	100	95.840	ENSMFAG00000040024	KARS	100	95.840	Macaca_fascicularis
ENSCCAG00000034307	-	100	95.645	ENSMNEG00000042879	-	100	95.645	Macaca_nemestrina
ENSCCAG00000034307	-	86	93.786	ENSMNEG00000035832	-	99	93.786	Macaca_nemestrina
ENSCCAG00000034307	-	100	95.840	ENSMLEG00000034947	KARS	100	95.840	Mandrillus_leucophaeus
ENSCCAG00000034307	-	97	79.102	ENSMAMG00000021559	kars	94	79.102	Mastacembelus_armatus
ENSCCAG00000034307	-	96	81.185	ENSMZEG00005014382	kars	97	79.966	Maylandia_zebra
ENSCCAG00000034307	-	95	84.425	ENSMGAG00000009000	KARS	100	84.425	Meleagris_gallopavo
ENSCCAG00000034307	-	100	94.807	ENSMICG00000011997	KARS	100	94.807	Microcebus_murinus
ENSCCAG00000034307	-	100	90.620	ENSMOCG00000019029	-	100	89.782	Microtus_ochrogaster
ENSCCAG00000034307	-	99	94.088	ENSMOCG00000011829	Kars	99	93.243	Microtus_ochrogaster
ENSCCAG00000034307	-	95	80.742	ENSMMOG00000016934	kars	99	80.565	Mola_mola
ENSCCAG00000034307	-	96	88.021	ENSMODG00000002215	-	99	87.674	Monodelphis_domestica
ENSCCAG00000034307	-	99	81.059	ENSMODG00000002238	-	99	80.257	Monodelphis_domestica
ENSCCAG00000034307	-	96	79.335	ENSMALG00000020858	kars	97	80.995	Monopterus_albus
ENSCCAG00000034307	-	86	88.144	MGP_CAROLIEiJ_G0031588	Kars	100	89.920	Mus_caroli
ENSCCAG00000034307	-	100	92.295	ENSMUSG00000031948	Kars	100	91.457	Mus_musculus
ENSCCAG00000034307	-	100	91.625	MGP_PahariEiJ_G0023186	Kars	100	90.787	Mus_pahari
ENSCCAG00000034307	-	100	92.295	MGP_SPRETEiJ_G0032706	Kars	100	91.457	Mus_spretus
ENSCCAG00000034307	-	100	93.440	ENSMPUG00000009871	KARS	100	93.440	Mustela_putorius_furo
ENSCCAG00000034307	-	100	93.970	ENSMLUG00000015119	-	100	93.970	Myotis_lucifugus
ENSCCAG00000034307	-	80	59.424	ENSMLUG00000026871	-	98	58.524	Myotis_lucifugus
ENSCCAG00000034307	-	100	94.305	ENSNGAG00000018820	-	100	93.467	Nannospalax_galili
ENSCCAG00000034307	-	95	93.628	ENSNGAG00000022944	-	96	92.743	Nannospalax_galili
ENSCCAG00000034307	-	96	81.010	ENSNBRG00000011098	kars	96	80.662	Neolamprologus_brichardi
ENSCCAG00000034307	-	100	96.985	ENSNLEG00000013072	KARS	100	96.985	Nomascus_leucogenys
ENSCCAG00000034307	-	95	86.042	ENSMEUG00000008684	KARS	98	83.196	Notamacropus_eugenii
ENSCCAG00000034307	-	98	93.301	ENSOPRG00000012544	KARS	100	93.301	Ochotona_princeps
ENSCCAG00000034307	-	97	68.276	ENSODEG00000009464	-	100	67.586	Octodon_degus
ENSCCAG00000034307	-	100	93.970	ENSODEG00000013099	-	100	93.970	Octodon_degus
ENSCCAG00000034307	-	96	81.185	ENSONIG00000005937	kars	99	80.137	Oreochromis_niloticus
ENSCCAG00000034307	-	96	89.236	ENSOANG00000008179	KARS	97	88.715	Ornithorhynchus_anatinus
ENSCCAG00000034307	-	100	86.600	ENSOCUG00000015553	KARS	100	87.270	Oryctolagus_cuniculus
ENSCCAG00000034307	-	95	81.305	ENSORLG00000007627	kars	98	77.686	Oryzias_latipes
ENSCCAG00000034307	-	95	81.129	ENSORLG00020010056	kars	98	77.521	Oryzias_latipes_hni
ENSCCAG00000034307	-	95	81.129	ENSORLG00015008179	kars	98	77.521	Oryzias_latipes_hsok
ENSCCAG00000034307	-	95	81.770	ENSOMEG00000001710	kars	97	81.770	Oryzias_melastigma
ENSCCAG00000034307	-	100	87.840	ENSOGAG00000005903	KARS	100	87.840	Otolemur_garnettii
ENSCCAG00000034307	-	92	94.364	ENSOARG00000006928	KARS	96	93.636	Ovis_aries
ENSCCAG00000034307	-	100	96.985	ENSPPAG00000036192	KARS	100	96.985	Pan_paniscus
ENSCCAG00000034307	-	100	94.640	ENSPPRG00000003027	KARS	100	94.640	Panthera_pardus
ENSCCAG00000034307	-	100	94.807	ENSPTIG00000008011	KARS	100	94.807	Panthera_tigris_altaica
ENSCCAG00000034307	-	100	97.280	ENSPTRG00000008364	KARS	100	97.280	Pan_troglodytes
ENSCCAG00000034307	-	100	96.160	ENSPANG00000024106	KARS	100	96.160	Papio_anubis
ENSCCAG00000034307	-	97	76.831	ENSPKIG00000009896	kars	99	79.002	Paramormyrops_kingsleyae
ENSCCAG00000034307	-	88	73.724	ENSPSIG00000003041	-	95	74.808	Pelodiscus_sinensis
ENSCCAG00000034307	-	94	86.583	ENSPSIG00000009294	KARS	96	86.762	Pelodiscus_sinensis
ENSCCAG00000034307	-	87	83.525	ENSPMGG00000006117	kars	99	80.531	Periophthalmus_magnuspinnatus
ENSCCAG00000034307	-	100	93.467	ENSPEMG00000012277	Kars	100	93.467	Peromyscus_maniculatus_bairdii
ENSCCAG00000034307	-	95	74.824	ENSPMAG00000008360	-	99	71.337	Petromyzon_marinus
ENSCCAG00000034307	-	97	91.222	ENSPCIG00000010761	-	97	90.706	Phascolarctos_cinereus
ENSCCAG00000034307	-	99	82.986	ENSPCIG00000025469	-	99	82.504	Phascolarctos_cinereus
ENSCCAG00000034307	-	96	79.720	ENSPFOG00000013253	kars	94	78.929	Poecilia_formosa
ENSCCAG00000034307	-	97	80.104	ENSPLAG00000004189	kars	99	80.104	Poecilia_latipinna
ENSCCAG00000034307	-	97	80.277	ENSPMEG00000015698	kars	99	80.277	Poecilia_mexicana
ENSCCAG00000034307	-	97	79.690	ENSPREG00000023179	kars	99	79.690	Poecilia_reticulata
ENSCCAG00000034307	-	100	97.120	ENSPPYG00000007567	KARS	100	97.120	Pongo_abelii
ENSCCAG00000034307	-	88	86.233	ENSPCAG00000010790	KARS	100	86.233	Procavia_capensis
ENSCCAG00000034307	-	100	85.595	ENSPCOG00000003166	KARS	100	85.595	Propithecus_coquereli
ENSCCAG00000034307	-	100	92.800	ENSPVAG00000006746	KARS	100	92.800	Pteropus_vampyrus
ENSCCAG00000034307	-	96	81.185	ENSPNYG00000013095	kars	97	79.966	Pundamilia_nyererei
ENSCCAG00000034307	-	96	82.056	ENSPNAG00000013828	kars	98	81.501	Pygocentrus_nattereri
ENSCCAG00000034307	-	100	91.374	ENSRNOG00000019456	Kars	100	91.374	Rattus_norvegicus
ENSCCAG00000034307	-	99	96.296	ENSRBIG00000030118	KARS	99	96.296	Rhinopithecus_bieti
ENSCCAG00000034307	-	100	96.320	ENSRROG00000041418	KARS	100	96.320	Rhinopithecus_roxellana
ENSCCAG00000034307	-	97	56.441	YDR037W	KRS1	98	56.610	Saccharomyces_cerevisiae
ENSCCAG00000034307	-	75	33.474	YNL073W	-	82	33.474	Saccharomyces_cerevisiae
ENSCCAG00000034307	-	100	98.720	ENSSBOG00000019255	KARS	100	98.720	Saimiri_boliviensis_boliviensis
ENSCCAG00000034307	-	93	77.076	ENSSHAG00000009005	-	98	77.473	Sarcophilus_harrisii
ENSCCAG00000034307	-	96	83.133	ENSSHAG00000001359	-	99	82.788	Sarcophilus_harrisii
ENSCCAG00000034307	-	99	72.713	ENSSHAG00000002050	-	99	72.392	Sarcophilus_harrisii
ENSCCAG00000034307	-	94	80.036	ENSSFOG00015014837	kars	99	79.857	Scleropages_formosus
ENSCCAG00000034307	-	97	80.589	ENSSMAG00000021441	kars	99	80.589	Scophthalmus_maximus
ENSCCAG00000034307	-	97	80.589	ENSSDUG00000001202	kars	99	80.589	Seriola_dumerili
ENSCCAG00000034307	-	95	80.600	ENSSLDG00000021220	kars	97	80.776	Seriola_lalandi_dorsalis
ENSCCAG00000034307	-	76	96.697	ENSSARG00000011493	KARS	79	96.697	Sorex_araneus
ENSCCAG00000034307	-	61	66.116	ENSSPUG00000000449	-	83	67.232	Sphenodon_punctatus
ENSCCAG00000034307	-	97	83.904	ENSSPUG00000004974	KARS	100	82.943	Sphenodon_punctatus
ENSCCAG00000034307	-	99	77.872	ENSSPAG00000020365	kars	97	79.514	Stegastes_partitus
ENSCCAG00000034307	-	100	94.975	ENSSSCG00000002704	KARS	100	94.975	Sus_scrofa
ENSCCAG00000034307	-	94	84.794	ENSTGUG00000008400	KARS	99	84.615	Taeniopygia_guttata
ENSCCAG00000034307	-	97	78.238	ENSTRUG00000017551	kars	99	75.574	Takifugu_rubripes
ENSCCAG00000034307	-	86	84.016	ENSTNIG00000009351	kars	95	80.680	Tetraodon_nigroviridis
ENSCCAG00000034307	-	96	74.306	ENSTBEG00000004610	KARS	100	74.306	Tupaia_belangeri
ENSCCAG00000034307	-	100	92.800	ENSTTRG00000001221	KARS	100	92.800	Tursiops_truncatus
ENSCCAG00000034307	-	100	93.802	ENSUAMG00000017557	KARS	100	93.802	Ursus_americanus
ENSCCAG00000034307	-	100	93.120	ENSUMAG00000014559	KARS	100	93.120	Ursus_maritimus
ENSCCAG00000034307	-	100	93.280	ENSVPAG00000003716	KARS	100	93.280	Vicugna_pacos
ENSCCAG00000034307	-	100	93.300	ENSVVUG00000024338	KARS	100	93.300	Vulpes_vulpes
ENSCCAG00000034307	-	97	79.002	ENSXETG00000003569	kars	98	78.830	Xenopus_tropicalis
ENSCCAG00000034307	-	94	80.107	ENSXCOG00000011313	kars	99	80.284	Xiphophorus_couchianus
ENSCCAG00000034307	-	97	79.690	ENSXMAG00000003191	kars	99	79.862	Xiphophorus_maculatus