EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000034385 (Gene tree)
Gene ID: 108290888
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 2768 bases
Position: chrKV389870.1:849526-852293
Accession: 108290888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000032706	PseudoU_synth_2	PF00849.22	9.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000050464	RPUSD1-201	1549	XM_017510950	ENSCCAP00000032706	312 (aa)	XP_017366439	A0A2K5RX93

Gene Model

Click here to download ENSCCAG00000034385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034385	RPUSD1	100	94.231	ENSG00000007376	RPUSD1	100	94.231	Homo_sapiens
ENSCCAG00000034385	RPUSD1	98	55.738	ENSAPOG00000022221	rpusd1	98	55.738	Acanthochromis_polyacanthus
ENSCCAG00000034385	RPUSD1	100	81.410	ENSAMEG00000007461	RPUSD1	100	81.410	Ailuropoda_melanoleuca
ENSCCAG00000034385	RPUSD1	98	57.190	ENSACIG00000015863	rpusd1	98	57.190	Amphilophus_citrinellus
ENSCCAG00000034385	RPUSD1	98	55.738	ENSAOCG00000021975	rpusd1	95	55.738	Amphiprion_ocellaris
ENSCCAG00000034385	RPUSD1	98	55.410	ENSAPEG00000001316	rpusd1	95	55.410	Amphiprion_percula
ENSCCAG00000034385	RPUSD1	81	64.427	ENSATEG00000002984	rpusd1	98	56.721	Anabas_testudineus
ENSCCAG00000034385	RPUSD1	79	59.514	ENSAPLG00000012316	RPUSD1	99	59.514	Anas_platyrhynchos
ENSCCAG00000034385	RPUSD1	99	66.129	ENSACAG00000008953	RPUSD1	100	65.595	Anolis_carolinensis
ENSCCAG00000034385	RPUSD1	100	98.397	ENSANAG00000024709	RPUSD1	100	98.397	Aotus_nancymaae
ENSCCAG00000034385	RPUSD1	81	65.217	ENSACLG00000013692	rpusd1	98	57.655	Astatotilapia_calliptera
ENSCCAG00000034385	RPUSD1	99	57.827	ENSAMXG00000019802	rpusd1	100	57.325	Astyanax_mexicanus
ENSCCAG00000034385	RPUSD1	100	86.538	ENSBTAG00000000179	RPUSD1	100	86.538	Bos_taurus
ENSCCAG00000034385	RPUSD1	100	96.795	ENSCJAG00000012253	RPUSD1	100	96.795	Callithrix_jacchus
ENSCCAG00000034385	RPUSD1	99	81.994	ENSCAFG00000019614	RPUSD1	99	82.958	Canis_familiaris
ENSCCAG00000034385	RPUSD1	99	81.994	ENSCAFG00020008891	RPUSD1	99	82.958	Canis_lupus_dingo
ENSCCAG00000034385	RPUSD1	100	85.256	ENSCHIG00000012872	RPUSD1	100	85.256	Capra_hircus
ENSCCAG00000034385	RPUSD1	99	85.531	ENSTSYG00000036934	RPUSD1	99	84.887	Carlito_syrichta
ENSCCAG00000034385	RPUSD1	100	84.295	ENSCAPG00000014219	RPUSD1	100	83.654	Cavia_aperea
ENSCCAG00000034385	RPUSD1	100	84.295	ENSCPOG00000034604	RPUSD1	100	83.654	Cavia_porcellus
ENSCCAG00000034385	RPUSD1	100	94.551	ENSCATG00000042983	RPUSD1	100	94.551	Cercocebus_atys
ENSCCAG00000034385	RPUSD1	100	83.654	ENSCLAG00000013966	RPUSD1	100	83.974	Chinchilla_lanigera
ENSCCAG00000034385	RPUSD1	100	94.231	ENSCSAG00000012121	RPUSD1	100	94.231	Chlorocebus_sabaeus
ENSCCAG00000034385	RPUSD1	99	64.935	ENSCPBG00000021101	RPUSD1	99	64.935	Chrysemys_picta_bellii
ENSCCAG00000034385	RPUSD1	90	95.374	ENSCANG00000028576	RPUSD1	98	95.290	Colobus_angolensis_palliatus
ENSCCAG00000034385	RPUSD1	100	82.692	ENSCGRG00001014253	Rpusd1	100	81.731	Cricetulus_griseus_chok1gshd
ENSCCAG00000034385	RPUSD1	100	82.692	ENSCGRG00000017995	Rpusd1	100	81.731	Cricetulus_griseus_crigri
ENSCCAG00000034385	RPUSD1	99	54.808	ENSCSEG00000018512	rpusd1	100	54.808	Cynoglossus_semilaevis
ENSCCAG00000034385	RPUSD1	98	56.311	ENSCVAG00000022746	rpusd1	98	55.519	Cyprinodon_variegatus
ENSCCAG00000034385	RPUSD1	99	59.871	ENSDARG00000060192	rpusd1	100	59.677	Danio_rerio
ENSCCAG00000034385	RPUSD1	100	83.333	ENSDNOG00000003721	RPUSD1	100	80.503	Dasypus_novemcinctus
ENSCCAG00000034385	RPUSD1	100	85.897	ENSDORG00000026656	Rpusd1	100	86.218	Dipodomys_ordii
ENSCCAG00000034385	RPUSD1	99	45.846	ENSEBUG00000008767	rpusd1	94	44.923	Eptatretus_burgeri
ENSCCAG00000034385	RPUSD1	99	85.079	ENSEASG00005018421	RPUSD1	75	86.349	Equus_asinus_asinus
ENSCCAG00000034385	RPUSD1	81	60.630	ENSELUG00000014307	rpusd1	88	54.045	Esox_lucius
ENSCCAG00000034385	RPUSD1	100	82.051	ENSFCAG00000010359	RPUSD1	100	82.051	Felis_catus
ENSCCAG00000034385	RPUSD1	99	64.630	ENSFALG00000003211	RPUSD1	100	64.194	Ficedula_albicollis
ENSCCAG00000034385	RPUSD1	100	85.256	ENSFDAG00000013398	RPUSD1	100	84.295	Fukomys_damarensis
ENSCCAG00000034385	RPUSD1	98	55.082	ENSFHEG00000004736	rpusd1	98	55.519	Fundulus_heteroclitus
ENSCCAG00000034385	RPUSD1	81	63.636	ENSGMOG00000010756	rpusd1	98	56.393	Gadus_morhua
ENSCCAG00000034385	RPUSD1	99	64.078	ENSGALG00000005315	RPUSD1	100	64.078	Gallus_gallus
ENSCCAG00000034385	RPUSD1	98	56.863	ENSGAFG00000009886	rpusd1	98	56.393	Gambusia_affinis
ENSCCAG00000034385	RPUSD1	80	64.143	ENSGACG00000014276	rpusd1	97	56.436	Gasterosteus_aculeatus
ENSCCAG00000034385	RPUSD1	99	64.610	ENSGAGG00000004181	RPUSD1	99	64.610	Gopherus_agassizii
ENSCCAG00000034385	RPUSD1	100	93.910	ENSGGOG00000013997	RPUSD1	100	93.910	Gorilla_gorilla
ENSCCAG00000034385	RPUSD1	81	64.822	ENSHBUG00000023728	rpusd1	98	57.329	Haplochromis_burtoni
ENSCCAG00000034385	RPUSD1	100	83.654	ENSHGLG00000002595	RPUSD1	100	83.974	Heterocephalus_glaber_female
ENSCCAG00000034385	RPUSD1	100	83.654	ENSHGLG00100014303	RPUSD1	100	83.974	Heterocephalus_glaber_male
ENSCCAG00000034385	RPUSD1	98	57.843	ENSHCOG00000002390	rpusd1	99	57.190	Hippocampus_comes
ENSCCAG00000034385	RPUSD1	99	59.416	ENSIPUG00000001570	rpusd1	99	59.416	Ictalurus_punctatus
ENSCCAG00000034385	RPUSD1	100	87.821	ENSSTOG00000004276	RPUSD1	100	87.179	Ictidomys_tridecemlineatus
ENSCCAG00000034385	RPUSD1	100	84.936	ENSJJAG00000015696	Rpusd1	100	80.938	Jaculus_jaculus
ENSCCAG00000034385	RPUSD1	98	56.066	ENSKMAG00000017287	rpusd1	98	56.169	Kryptolebias_marmoratus
ENSCCAG00000034385	RPUSD1	98	57.049	ENSLBEG00000022502	rpusd1	98	57.049	Labrus_bergylta
ENSCCAG00000034385	RPUSD1	98	57.049	ENSLBEG00000013354	RPUSD1	98	57.049	Labrus_bergylta
ENSCCAG00000034385	RPUSD1	99	61.688	ENSLACG00000008869	RPUSD1	99	61.688	Latimeria_chalumnae
ENSCCAG00000034385	RPUSD1	69	72.685	ENSLOCG00000005682	rpusd1	99	72.685	Lepisosteus_oculatus
ENSCCAG00000034385	RPUSD1	100	81.410	ENSLAFG00000002115	RPUSD1	100	81.410	Loxodonta_africana
ENSCCAG00000034385	RPUSD1	100	94.872	ENSMFAG00000003961	RPUSD1	100	94.872	Macaca_fascicularis
ENSCCAG00000034385	RPUSD1	100	94.872	ENSMMUG00000000842	RPUSD1	100	94.872	Macaca_mulatta
ENSCCAG00000034385	RPUSD1	100	94.872	ENSMNEG00000042712	RPUSD1	100	94.872	Macaca_nemestrina
ENSCCAG00000034385	RPUSD1	100	94.872	ENSMLEG00000030591	RPUSD1	100	94.872	Mandrillus_leucophaeus
ENSCCAG00000034385	RPUSD1	98	56.863	ENSMAMG00000004735	rpusd1	98	56.818	Mastacembelus_armatus
ENSCCAG00000034385	RPUSD1	81	65.217	ENSMZEG00005003214	rpusd1	98	57.655	Maylandia_zebra
ENSCCAG00000034385	RPUSD1	97	63.036	ENSMGAG00000005447	RPUSD1	99	63.245	Meleagris_gallopavo
ENSCCAG00000034385	RPUSD1	84	77.068	ENSMAUG00000019998	Rpusd1	100	77.068	Mesocricetus_auratus
ENSCCAG00000034385	RPUSD1	100	89.423	ENSMICG00000017561	RPUSD1	100	86.120	Microcebus_murinus
ENSCCAG00000034385	RPUSD1	99	83.601	ENSMOCG00000014082	Rpusd1	99	83.280	Microtus_ochrogaster
ENSCCAG00000034385	RPUSD1	79	64.082	ENSMMOG00000012569	rpusd1	90	64.082	Mola_mola
ENSCCAG00000034385	RPUSD1	100	66.981	ENSMODG00000016882	RPUSD1	100	67.405	Monodelphis_domestica
ENSCCAG00000034385	RPUSD1	98	57.468	ENSMALG00000017818	rpusd1	98	57.190	Monopterus_albus
ENSCCAG00000034385	RPUSD1	100	83.333	MGP_CAROLIEiJ_G0021244	Rpusd1	100	83.013	Mus_caroli
ENSCCAG00000034385	RPUSD1	100	83.333	ENSMUSG00000041199	Rpusd1	100	83.013	Mus_musculus
ENSCCAG00000034385	RPUSD1	100	81.410	MGP_PahariEiJ_G0023562	Rpusd1	99	82.201	Mus_pahari
ENSCCAG00000034385	RPUSD1	100	83.333	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.013	Mus_spretus
ENSCCAG00000034385	RPUSD1	100	80.449	ENSMPUG00000015897	RPUSD1	100	81.090	Mustela_putorius_furo
ENSCCAG00000034385	RPUSD1	100	87.179	ENSMLUG00000001089	RPUSD1	100	87.179	Myotis_lucifugus
ENSCCAG00000034385	RPUSD1	100	84.615	ENSNGAG00000003595	Rpusd1	100	84.615	Nannospalax_galili
ENSCCAG00000034385	RPUSD1	79	64.777	ENSNBRG00000006457	rpusd1	98	56.352	Neolamprologus_brichardi
ENSCCAG00000034385	RPUSD1	56	92.571	ENSNLEG00000008424	-	100	92.571	Nomascus_leucogenys
ENSCCAG00000034385	RPUSD1	100	69.872	ENSMEUG00000016049	RPUSD1	100	69.108	Notamacropus_eugenii
ENSCCAG00000034385	RPUSD1	99	78.065	ENSOPRG00000008340	RPUSD1	99	77.097	Ochotona_princeps
ENSCCAG00000034385	RPUSD1	100	82.692	ENSODEG00000016945	RPUSD1	100	82.372	Octodon_degus
ENSCCAG00000034385	RPUSD1	81	64.032	ENSONIG00000015672	rpusd1	99	56.678	Oreochromis_niloticus
ENSCCAG00000034385	RPUSD1	99	57.468	ENSORLG00000013009	rpusd1	99	57.468	Oryzias_latipes
ENSCCAG00000034385	RPUSD1	99	57.143	ENSORLG00020010382	rpusd1	99	57.143	Oryzias_latipes_hni
ENSCCAG00000034385	RPUSD1	99	56.494	ENSORLG00015021354	rpusd1	99	56.494	Oryzias_latipes_hsok
ENSCCAG00000034385	RPUSD1	98	57.705	ENSOMEG00000021426	rpusd1	98	57.705	Oryzias_melastigma
ENSCCAG00000034385	RPUSD1	100	90.705	ENSOGAG00000003795	RPUSD1	100	90.705	Otolemur_garnettii
ENSCCAG00000034385	RPUSD1	100	86.218	ENSOARG00000014254	RPUSD1	100	86.218	Ovis_aries
ENSCCAG00000034385	RPUSD1	100	93.910	ENSPPAG00000034797	RPUSD1	100	93.910	Pan_paniscus
ENSCCAG00000034385	RPUSD1	100	82.051	ENSPPRG00000012389	RPUSD1	100	80.635	Panthera_pardus
ENSCCAG00000034385	RPUSD1	100	81.731	ENSPTIG00000008545	RPUSD1	92	80.317	Panthera_tigris_altaica
ENSCCAG00000034385	RPUSD1	100	93.910	ENSPTRG00000007565	RPUSD1	100	93.910	Pan_troglodytes
ENSCCAG00000034385	RPUSD1	100	94.231	ENSPANG00000024401	RPUSD1	100	94.231	Papio_anubis
ENSCCAG00000034385	RPUSD1	99	59.807	ENSPKIG00000018890	rpusd1	91	59.164	Paramormyrops_kingsleyae
ENSCCAG00000034385	RPUSD1	99	65.372	ENSPSIG00000013945	RPUSD1	100	65.372	Pelodiscus_sinensis
ENSCCAG00000034385	RPUSD1	98	57.049	ENSPMGG00000014950	rpusd1	98	57.049	Periophthalmus_magnuspinnatus
ENSCCAG00000034385	RPUSD1	100	83.013	ENSPEMG00000000497	Rpusd1	100	82.692	Peromyscus_maniculatus_bairdii
ENSCCAG00000034385	RPUSD1	82	56.031	ENSPMAG00000001563	rpusd1	81	56.800	Petromyzon_marinus
ENSCCAG00000034385	RPUSD1	100	69.968	ENSPCIG00000021216	-	94	68.590	Phascolarctos_cinereus
ENSCCAG00000034385	RPUSD1	98	57.705	ENSPFOG00000007946	rpusd1	98	57.003	Poecilia_formosa
ENSCCAG00000034385	RPUSD1	98	57.705	ENSPLAG00000011925	rpusd1	98	57.003	Poecilia_latipinna
ENSCCAG00000034385	RPUSD1	98	57.377	ENSPMEG00000002910	rpusd1	98	56.678	Poecilia_mexicana
ENSCCAG00000034385	RPUSD1	98	57.516	ENSPREG00000019851	rpusd1	98	57.003	Poecilia_reticulata
ENSCCAG00000034385	RPUSD1	100	69.872	ENSPCAG00000002258	RPUSD1	100	69.872	Procavia_capensis
ENSCCAG00000034385	RPUSD1	100	90.705	ENSPCOG00000022582	RPUSD1	100	90.705	Propithecus_coquereli
ENSCCAG00000034385	RPUSD1	100	84.615	ENSPVAG00000013104	RPUSD1	100	84.615	Pteropus_vampyrus
ENSCCAG00000034385	RPUSD1	98	56.393	ENSPNYG00000024076	rpusd1	98	57.329	Pundamilia_nyererei
ENSCCAG00000034385	RPUSD1	98	56.209	ENSPNAG00000013806	rpusd1	87	62.791	Pygocentrus_nattereri
ENSCCAG00000034385	RPUSD1	100	83.013	ENSRNOG00000023639	Rpusd1	100	82.692	Rattus_norvegicus
ENSCCAG00000034385	RPUSD1	100	94.551	ENSRBIG00000030238	RPUSD1	100	94.551	Rhinopithecus_bieti
ENSCCAG00000034385	RPUSD1	100	94.551	ENSRROG00000036663	RPUSD1	100	94.551	Rhinopithecus_roxellana
ENSCCAG00000034385	RPUSD1	100	95.513	ENSSBOG00000033063	RPUSD1	100	95.513	Saimiri_boliviensis_boliviensis
ENSCCAG00000034385	RPUSD1	100	68.269	ENSSHAG00000013500	RPUSD1	100	68.269	Sarcophilus_harrisii
ENSCCAG00000034385	RPUSD1	99	61.812	ENSSFOG00015014394	rpusd1	99	61.688	Scleropages_formosus
ENSCCAG00000034385	RPUSD1	98	56.721	ENSSMAG00000008045	rpusd1	91	56.721	Scophthalmus_maximus
ENSCCAG00000034385	RPUSD1	98	58.689	ENSSDUG00000001829	rpusd1	95	58.689	Seriola_dumerili
ENSCCAG00000034385	RPUSD1	98	58.689	ENSSLDG00000020853	rpusd1	95	58.689	Seriola_lalandi_dorsalis
ENSCCAG00000034385	RPUSD1	54	90.419	ENSSARG00000011187	-	100	90.419	Sorex_araneus
ENSCCAG00000034385	RPUSD1	63	52.764	ENSSPUG00000005119	-	100	51.456	Sphenodon_punctatus
ENSCCAG00000034385	RPUSD1	98	56.721	ENSSPAG00000012708	rpusd1	98	56.721	Stegastes_partitus
ENSCCAG00000034385	RPUSD1	100	86.538	ENSSSCG00000008000	RPUSD1	98	88.976	Sus_scrofa
ENSCCAG00000034385	RPUSD1	82	71.875	ENSTGUG00000015375	RPUSD1	100	71.875	Taeniopygia_guttata
ENSCCAG00000034385	RPUSD1	98	55.987	ENSTRUG00000003041	rpusd1	98	55.556	Takifugu_rubripes
ENSCCAG00000034385	RPUSD1	81	61.265	ENSTNIG00000002660	rpusd1	92	61.265	Tetraodon_nigroviridis
ENSCCAG00000034385	RPUSD1	99	86.817	ENSTTRG00000010167	RPUSD1	99	86.817	Tursiops_truncatus
ENSCCAG00000034385	RPUSD1	100	80.769	ENSUAMG00000012736	RPUSD1	100	81.731	Ursus_americanus
ENSCCAG00000034385	RPUSD1	100	80.769	ENSUMAG00000021174	RPUSD1	100	81.731	Ursus_maritimus
ENSCCAG00000034385	RPUSD1	99	81.672	ENSVVUG00000012357	RPUSD1	99	81.672	Vulpes_vulpes
ENSCCAG00000034385	RPUSD1	100	60.577	ENSXETG00000007184	rpusd1	100	60.577	Xenopus_tropicalis
ENSCCAG00000034385	RPUSD1	98	56.536	ENSXCOG00000017930	rpusd1	98	55.410	Xiphophorus_couchianus
ENSCCAG00000034385	RPUSD1	98	57.190	ENSXMAG00000024084	rpusd1	98	56.393	Xiphophorus_maculatus