EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000034440 (Gene tree)
Gene ID: 108286351
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 12278 bases
Position: chrKV389744.1:136620-148897
Accession: 108286351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000033011	RRM_1	PF00076.22	7.9e-18	1	1
ENSCCAP00000032952	RRM_1	PF00076.22	8.7e-18	1	1
ENSCCAP00000033029	RRM_1	PF00076.22	9.4e-18	1	1
ENSCCAP00000032944	RRM_1	PF00076.22	9.4e-18	1	1
ENSCCAP00000033001	RRM_1	PF00076.22	9.4e-18	1	1
ENSCCAP00000033017	RRM_1	PF00076.22	8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000050782	RBM42-205	1152	XM_017504106	ENSCCAP00000033015	383 (aa)	XP_017359595	A0A2K5RY19
ENSCCAT00000050710	RBM42-201	1728	XM_017504102	ENSCCAP00000032944	477 (aa)	XP_017359591	A0A2K5RY38
ENSCCAT00000050768	RBM42-203	1434	XM_017504103	ENSCCAP00000033001	477 (aa)	XP_017359592	A0A2K5RY38
ENSCCAT00000050778	RBM42-204	1272	-	ENSCCAP00000033011	423 (aa)	-	A0A2K5RY46
ENSCCAT00000050784	RBM42-206	546	-	ENSCCAP00000033017	181 (aa)	-	A0A2K5RXZ1
ENSCCAT00000050718	RBM42-202	1657	XM_017504104	ENSCCAP00000032952	455 (aa)	XP_017359593	A0A2K5RXS3
ENSCCAT00000050796	RBM42-207	1437	-	ENSCCAP00000033029	478 (aa)	-	A0A2K5RY03

Gene Model

Click here to download ENSCCAG00000034440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034440	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSCCAG00000034440	RBM42	100	98.121	ENSAMEG00000000524	RBM42	100	98.121	Ailuropoda_melanoleuca
ENSCCAG00000034440	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSCCAG00000034440	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.901	Bos_taurus
ENSCCAG00000034440	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSCCAG00000034440	RBM42	100	100.000	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSCCAG00000034440	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	97.904	Capra_hircus
ENSCCAG00000034440	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSCCAG00000034440	RBM42	81	98.446	ENSCAPG00000009566	RBM42	99	98.446	Cavia_aperea
ENSCCAG00000034440	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	98.113	Cavia_porcellus
ENSCCAG00000034440	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSCCAG00000034440	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.484	Chinchilla_lanigera
ENSCCAG00000034440	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	97.380	Chlorocebus_sabaeus
ENSCCAG00000034440	RBM42	100	88.889	ENSCANG00000030272	RBM42	100	88.889	Colobus_angolensis_palliatus
ENSCCAG00000034440	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.275	Cricetulus_griseus_chok1gshd
ENSCCAG00000034440	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	97.292	Dasypus_novemcinctus
ENSCCAG00000034440	RBM42	100	97.275	ENSDORG00000013001	Rbm42	99	97.275	Dipodomys_ordii
ENSCCAG00000034440	RBM42	93	91.304	ENSETEG00000007878	RBM42	74	91.304	Echinops_telfairi
ENSCCAG00000034440	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	96.923	Equus_asinus_asinus
ENSCCAG00000034440	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	96.923	Equus_caballus
ENSCCAG00000034440	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSCCAG00000034440	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.451	Fukomys_damarensis
ENSCCAG00000034440	RBM42	73	97.183	ENSGAGG00000014805	RBM42	50	92.086	Gopherus_agassizii
ENSCCAG00000034440	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSCCAG00000034440	RBM42	96	100.000	ENSHGLG00000008418	RBM42	99	95.597	Heterocephalus_glaber_female
ENSCCAG00000034440	RBM42	96	100.000	ENSHGLG00100018667	RBM42	99	95.597	Heterocephalus_glaber_male
ENSCCAG00000034440	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	97.275	Ictidomys_tridecemlineatus
ENSCCAG00000034440	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.646	Jaculus_jaculus
ENSCCAG00000034440	RBM42	98	93.376	ENSLAFG00000014993	RBM42	99	93.096	Loxodonta_africana
ENSCCAG00000034440	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSCCAG00000034440	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSCCAG00000034440	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSCCAG00000034440	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSCCAG00000034440	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSCCAG00000034440	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	97.065	Microtus_ochrogaster
ENSCCAG00000034440	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	81.856	Monodelphis_domestica
ENSCCAG00000034440	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.694	Mus_caroli
ENSCCAG00000034440	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.694	Mus_musculus
ENSCCAG00000034440	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.694	Mus_pahari
ENSCCAG00000034440	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.694	Mus_spretus
ENSCCAG00000034440	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	97.143	Mustela_putorius_furo
ENSCCAG00000034440	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	97.065	Myotis_lucifugus
ENSCCAG00000034440	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	97.065	Nannospalax_galili
ENSCCAG00000034440	RBM42	85	86.066	ENSNLEG00000011272	-	94	92.458	Nomascus_leucogenys
ENSCCAG00000034440	RBM42	90	100.000	ENSMEUG00000016300	RBM42	100	81.687	Notamacropus_eugenii
ENSCCAG00000034440	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	92.243	Ochotona_princeps
ENSCCAG00000034440	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.694	Octodon_degus
ENSCCAG00000034440	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	96.070	Oryctolagus_cuniculus
ENSCCAG00000034440	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.484	Otolemur_garnettii
ENSCCAG00000034440	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	93.067	Ovis_aries
ENSCCAG00000034440	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSCCAG00000034440	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSCCAG00000034440	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSCCAG00000034440	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSCCAG00000034440	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSCCAG00000034440	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	98.113	Peromyscus_maniculatus_bairdii
ENSCCAG00000034440	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	81.856	Phascolarctos_cinereus
ENSCCAG00000034440	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	98.144	Pongo_abelii
ENSCCAG00000034440	RBM42	90	100.000	ENSPCAG00000013053	RBM42	100	84.696	Procavia_capensis
ENSCCAG00000034440	RBM42	97	76.279	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSCCAG00000034440	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSCCAG00000034440	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	98.113	Pteropus_vampyrus
ENSCCAG00000034440	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.904	Rattus_norvegicus
ENSCCAG00000034440	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSCCAG00000034440	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSCCAG00000034440	RBM42	90	99.737	ENSSBOG00000030666	RBM42	100	99.754	Saimiri_boliviensis_boliviensis
ENSCCAG00000034440	RBM42	100	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSCCAG00000034440	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	98.345	Sus_scrofa
ENSCCAG00000034440	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	98.323	Ursus_americanus
ENSCCAG00000034440	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	98.323	Ursus_maritimus
ENSCCAG00000034440	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	97.065	Vulpes_vulpes