EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000034600 (Gene tree)
Gene ID: 108305092
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 13195 bases
Position: chrKV389486.1:1415453-1428647
Accession: 108305092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000033826	MBD	PF01429.19	3.7e-16	1	1
ENSCCAP00000033765	MBD	PF01429.19	3.9e-16	1	1
ENSCCAP00000033835	MBD	PF01429.19	4.1e-16	1	1
ENSCCAP00000033822	MBD	PF01429.19	4.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000051537	MBD1-201	4895	XM_017529588	ENSCCAP00000033765	732 (aa)	XP_017385077	A0A2K5S072
ENSCCAT00000051594	MBD1-202	1959	-	ENSCCAP00000033822	652 (aa)	-	A0A2K5S0A3
ENSCCAT00000051607	MBD1-204	1716	-	ENSCCAP00000033835	571 (aa)	-	A0A2K5S0E5
ENSCCAT00000051615	MBD1-205	1293	-	ENSCCAP00000033843	430 (aa)	-	A0A2K5S0B9
ENSCCAT00000051598	MBD1-203	1638	-	ENSCCAP00000033826	546 (aa)	-	A0A2K5S0D8

Gene Model

Click here to download ENSCCAG00000034600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034600	MBD1	100	94.351	ENSG00000141644	MBD1	99	97.333	Homo_sapiens
ENSCCAG00000034600	MBD1	100	74.842	ENSAMEG00000000238	MBD1	97	80.031	Ailuropoda_melanoleuca
ENSCCAG00000034600	MBD1	69	44.554	ENSACAG00000006091	-	100	44.307	Anolis_carolinensis
ENSCCAG00000034600	MBD1	100	96.037	ENSANAG00000036253	MBD1	100	96.037	Aotus_nancymaae
ENSCCAG00000034600	MBD1	91	90.461	ENSBTAG00000003801	MBD1	100	84.304	Bos_taurus
ENSCCAG00000034600	MBD1	100	95.884	ENSCJAG00000004959	MBD1	100	95.884	Callithrix_jacchus
ENSCCAG00000034600	MBD1	100	74.960	ENSCAFG00000018928	MBD1	97	80.769	Canis_familiaris
ENSCCAG00000034600	MBD1	99	74.318	ENSCAFG00020024272	MBD1	97	80.032	Canis_lupus_dingo
ENSCCAG00000034600	MBD1	100	76.032	ENSCHIG00000021134	MBD1	100	84.304	Capra_hircus
ENSCCAG00000034600	MBD1	100	88.397	ENSTSYG00000000509	MBD1	100	88.415	Carlito_syrichta
ENSCCAG00000034600	MBD1	99	67.549	ENSCAPG00000015782	MBD1	96	67.196	Cavia_aperea
ENSCCAG00000034600	MBD1	100	58.457	ENSCPOG00000001671	MBD1	100	72.118	Cavia_porcellus
ENSCCAG00000034600	MBD1	100	94.251	ENSCATG00000029959	MBD1	100	94.489	Cercocebus_atys
ENSCCAG00000034600	MBD1	100	74.127	ENSCLAG00000007457	MBD1	93	79.346	Chinchilla_lanigera
ENSCCAG00000034600	MBD1	90	94.764	ENSCSAG00000018070	MBD1	100	94.652	Chlorocebus_sabaeus
ENSCCAG00000034600	MBD1	99	93.236	ENSCANG00000033425	MBD1	100	94.327	Colobus_angolensis_palliatus
ENSCCAG00000034600	MBD1	92	73.058	ENSCGRG00001014843	Mbd1	100	72.786	Cricetulus_griseus_chok1gshd
ENSCCAG00000034600	MBD1	99	61.796	ENSCGRG00000014135	Mbd1	96	57.286	Cricetulus_griseus_crigri
ENSCCAG00000034600	MBD1	100	71.157	ENSDNOG00000015998	MBD1	100	76.672	Dasypus_novemcinctus
ENSCCAG00000034600	MBD1	99	74.074	ENSDORG00000013917	Mbd1	96	78.354	Dipodomys_ordii
ENSCCAG00000034600	MBD1	100	84.627	ENSEASG00005003857	MBD1	100	84.627	Equus_asinus_asinus
ENSCCAG00000034600	MBD1	97	82.022	ENSECAG00000011497	MBD1	93	83.567	Equus_caballus
ENSCCAG00000034600	MBD1	100	85.388	ENSFCAG00000015730	MBD1	100	84.932	Felis_catus
ENSCCAG00000034600	MBD1	99	78.207	ENSFDAG00000011085	MBD1	96	76.712	Fukomys_damarensis
ENSCCAG00000034600	MBD1	91	35.663	ENSGAGG00000008206	-	51	49.458	Gopherus_agassizii
ENSCCAG00000034600	MBD1	100	93.893	ENSGGOG00000016966	MBD1	100	94.327	Gorilla_gorilla
ENSCCAG00000034600	MBD1	91	84.060	ENSHGLG00000008740	MBD1	100	83.630	Heterocephalus_glaber_female
ENSCCAG00000034600	MBD1	100	79.685	ENSHGLG00100005198	MBD1	98	89.354	Heterocephalus_glaber_male
ENSCCAG00000034600	MBD1	62	38.037	ENSIPUG00000015243	-	50	37.576	Ictalurus_punctatus
ENSCCAG00000034600	MBD1	92	80.389	ENSSTOG00000007780	MBD1	100	82.287	Ictidomys_tridecemlineatus
ENSCCAG00000034600	MBD1	98	73.721	ENSJJAG00000022859	Mbd1	96	73.628	Jaculus_jaculus
ENSCCAG00000034600	MBD1	74	34.123	ENSKMAG00000020760	mbd1b	50	35.028	Kryptolebias_marmoratus
ENSCCAG00000034600	MBD1	71	41.250	ENSLACG00000002414	-	58	40.704	Latimeria_chalumnae
ENSCCAG00000034600	MBD1	92	73.399	ENSLAFG00000031328	MBD1	97	74.252	Loxodonta_africana
ENSCCAG00000034600	MBD1	100	93.902	ENSMFAG00000026335	MBD1	100	94.165	Macaca_fascicularis
ENSCCAG00000034600	MBD1	99	93.053	ENSMMUG00000009050	MBD1	99	91.788	Macaca_mulatta
ENSCCAG00000034600	MBD1	100	93.902	ENSMNEG00000038822	MBD1	100	94.165	Macaca_nemestrina
ENSCCAG00000034600	MBD1	100	94.251	ENSMLEG00000043121	MBD1	100	94.489	Mandrillus_leucophaeus
ENSCCAG00000034600	MBD1	68	36.747	ENSMAMG00000023341	-	60	37.126	Mastacembelus_armatus
ENSCCAG00000034600	MBD1	99	86.055	ENSMICG00000006414	MBD1	100	88.038	Microcebus_murinus
ENSCCAG00000034600	MBD1	51	73.145	ENSMOCG00000011976	-	93	77.186	Microtus_ochrogaster
ENSCCAG00000034600	MBD1	71	45.455	ENSMODG00000001286	-	58	44.444	Monodelphis_domestica
ENSCCAG00000034600	MBD1	99	60.033	ENSMUSG00000024561	Mbd1	97	65.625	Mus_musculus
ENSCCAG00000034600	MBD1	99	60.575	MGP_PahariEiJ_G0019128	Mbd1	100	66.614	Mus_pahari
ENSCCAG00000034600	MBD1	96	61.706	MGP_SPRETEiJ_G0023304	Mbd1	99	67.480	Mus_spretus
ENSCCAG00000034600	MBD1	100	76.424	ENSMPUG00000008843	MBD1	98	81.498	Mustela_putorius_furo
ENSCCAG00000034600	MBD1	100	74.127	ENSMLUG00000008286	MBD1	98	78.681	Myotis_lucifugus
ENSCCAG00000034600	MBD1	98	71.130	ENSNGAG00000011412	Mbd1	96	71.130	Nannospalax_galili
ENSCCAG00000034600	MBD1	98	80.927	ENSNLEG00000032711	-	100	76.982	Nomascus_leucogenys
ENSCCAG00000034600	MBD1	100	93.282	ENSNLEG00000011661	-	100	93.841	Nomascus_leucogenys
ENSCCAG00000034600	MBD1	96	69.406	ENSOPRG00000007647	MBD1	100	73.582	Ochotona_princeps
ENSCCAG00000034600	MBD1	99	75.972	ENSODEG00000018451	MBD1	97	78.241	Octodon_degus
ENSCCAG00000034600	MBD1	78	48.399	ENSOANG00000014593	-	100	47.593	Ornithorhynchus_anatinus
ENSCCAG00000034600	MBD1	100	73.333	ENSOCUG00000006554	MBD1	100	78.072	Oryctolagus_cuniculus
ENSCCAG00000034600	MBD1	100	77.031	ENSOGAG00000003784	MBD1	99	79.881	Otolemur_garnettii
ENSCCAG00000034600	MBD1	100	75.475	ENSOARG00000004218	MBD1	95	79.444	Ovis_aries
ENSCCAG00000034600	MBD1	100	94.077	ENSPPAG00000038886	MBD1	100	94.327	Pan_paniscus
ENSCCAG00000034600	MBD1	100	84.720	ENSPPRG00000021387	MBD1	100	84.814	Panthera_pardus
ENSCCAG00000034600	MBD1	100	85.236	ENSPTIG00000021231	MBD1	100	84.814	Panthera_tigris_altaica
ENSCCAG00000034600	MBD1	100	94.077	ENSPTRG00000010021	MBD1	100	94.327	Pan_troglodytes
ENSCCAG00000034600	MBD1	100	94.351	ENSPANG00000010867	MBD1	100	94.360	Papio_anubis
ENSCCAG00000034600	MBD1	99	62.351	ENSPEMG00000022630	Mbd1	97	62.351	Peromyscus_maniculatus_bairdii
ENSCCAG00000034600	MBD1	81	60.227	ENSPCIG00000027937	-	79	47.204	Phascolarctos_cinereus
ENSCCAG00000034600	MBD1	90	94.764	ENSPPYG00000009158	MBD1	94	93.271	Pongo_abelii
ENSCCAG00000034600	MBD1	85	86.742	ENSPCAG00000001648	MBD1	99	74.878	Procavia_capensis
ENSCCAG00000034600	MBD1	99	89.008	ENSPCOG00000012450	MBD1	100	89.968	Propithecus_coquereli
ENSCCAG00000034600	MBD1	99	54.217	ENSRNOG00000024104	Mbd1	96	56.075	Rattus_norvegicus
ENSCCAG00000034600	MBD1	100	85.366	ENSRBIG00000041294	MBD1	100	86.224	Rhinopithecus_bieti
ENSCCAG00000034600	MBD1	100	89.721	ENSRROG00000032517	MBD1	100	94.165	Rhinopithecus_roxellana
ENSCCAG00000034600	MBD1	100	96.696	ENSSBOG00000027169	MBD1	100	96.696	Saimiri_boliviensis_boliviensis
ENSCCAG00000034600	MBD1	84	46.285	ENSSHAG00000003661	-	100	47.558	Sarcophilus_harrisii
ENSCCAG00000034600	MBD1	67	34.595	ENSSPAG00000021447	mbd1b	51	38.235	Stegastes_partitus
ENSCCAG00000034600	MBD1	96	83.048	ENSSSCG00000004516	MBD1	100	84.441	Sus_scrofa
ENSCCAG00000034600	MBD1	68	79.545	ENSTBEG00000012651	-	68	81.667	Tupaia_belangeri
ENSCCAG00000034600	MBD1	90	82.828	ENSTTRG00000015523	MBD1	100	83.522	Tursiops_truncatus
ENSCCAG00000034600	MBD1	99	75.208	ENSUAMG00000004752	MBD1	100	81.068	Ursus_americanus
ENSCCAG00000034600	MBD1	90	84.343	ENSUMAG00000002947	MBD1	100	84.330	Ursus_maritimus