EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000034685 (Gene tree)
Gene ID: 108287756
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 384246 bases
Position: chrKV389780.1:1481976-1866221
Accession: 108287756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000033361	CMS1	PF14617.6	1.3e-32	1	1
ENSCCAP00000033358	CMS1	PF14617.6	1.7e-32	1	1
ENSCCAP00000033361	DEAD	PF00270.29	5.4e-06	1	1
ENSCCAP00000033358	DEAD	PF00270.29	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000051126	CMSS1-201	843	XM_017506330	ENSCCAP00000033358	280 (aa)	XP_017361819	A0A2K5RYY1
ENSCCAT00000051129	CMSS1-202	1054	XM_017506331	ENSCCAP00000033361	262 (aa)	XP_017361820	A0A2K5RZ49

Gene Model

Click here to download ENSCCAG00000034685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034685	CMSS1	100	94.286	ENSG00000184220	CMSS1	100	94.286	Homo_sapiens
ENSCCAG00000034685	CMSS1	77	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSCCAG00000034685	CMSS1	99	90.000	ENSAMEG00000004092	CMSS1	100	90.000	Ailuropoda_melanoleuca
ENSCCAG00000034685	CMSS1	77	54.455	ENSACIG00000021854	cmss1	91	50.413	Amphilophus_citrinellus
ENSCCAG00000034685	CMSS1	100	53.633	ENSAOCG00000013361	cmss1	100	52.941	Amphiprion_ocellaris
ENSCCAG00000034685	CMSS1	100	52.759	ENSAPEG00000005829	cmss1	100	52.492	Amphiprion_percula
ENSCCAG00000034685	CMSS1	100	53.633	ENSATEG00000008209	cmss1	100	54.608	Anabas_testudineus
ENSCCAG00000034685	CMSS1	87	68.696	ENSAPLG00000010542	CMSS1	100	68.696	Anas_platyrhynchos
ENSCCAG00000034685	CMSS1	99	62.687	ENSACAG00000011065	CMSS1	98	62.687	Anolis_carolinensis
ENSCCAG00000034685	CMSS1	100	97.143	ENSANAG00000023565	CMSS1	100	97.143	Aotus_nancymaae
ENSCCAG00000034685	CMSS1	100	50.515	ENSACLG00000027294	cmss1	100	51.203	Astatotilapia_calliptera
ENSCCAG00000034685	CMSS1	100	46.488	ENSAMXG00000002046	cmss1	100	47.973	Astyanax_mexicanus
ENSCCAG00000034685	CMSS1	100	86.429	ENSBTAG00000013663	CMSS1	100	88.214	Bos_taurus
ENSCCAG00000034685	CMSS1	100	96.786	ENSCJAG00000000610	CMSS1	100	96.786	Callithrix_jacchus
ENSCCAG00000034685	CMSS1	100	91.221	ENSCAFG00000009230	CMSS1	95	91.221	Canis_familiaris
ENSCCAG00000034685	CMSS1	88	84.914	ENSCAFG00020024156	-	76	81.224	Canis_lupus_dingo
ENSCCAG00000034685	CMSS1	98	91.860	ENSCAFG00020009464	-	95	91.538	Canis_lupus_dingo
ENSCCAG00000034685	CMSS1	98	89.147	ENSCHIG00000013003	CMSS1	93	89.147	Capra_hircus
ENSCCAG00000034685	CMSS1	99	90.000	ENSTSYG00000009266	CMSS1	99	90.000	Carlito_syrichta
ENSCCAG00000034685	CMSS1	85	72.489	ENSCAPG00000013584	CMSS1	100	68.803	Cavia_aperea
ENSCCAG00000034685	CMSS1	100	87.143	ENSCPOG00000014680	CMSS1	100	87.143	Cavia_porcellus
ENSCCAG00000034685	CMSS1	100	95.038	ENSCATG00000031980	CMSS1	100	95.038	Cercocebus_atys
ENSCCAG00000034685	CMSS1	87	93.450	ENSCLAG00000011241	CMSS1	98	93.450	Chinchilla_lanigera
ENSCCAG00000034685	CMSS1	94	95.102	ENSCSAG00000006024	CMSS1	100	95.102	Chlorocebus_sabaeus
ENSCCAG00000034685	CMSS1	100	69.643	ENSCHOG00000012098	CMSS1	100	69.643	Choloepus_hoffmanni
ENSCCAG00000034685	CMSS1	71	40.838	ENSCING00000014848	-	100	41.176	Ciona_intestinalis
ENSCCAG00000034685	CMSS1	100	94.286	ENSCANG00000031337	CMSS1	100	94.286	Colobus_angolensis_palliatus
ENSCCAG00000034685	CMSS1	100	81.786	ENSCGRG00001014305	Cmss1	100	81.786	Cricetulus_griseus_chok1gshd
ENSCCAG00000034685	CMSS1	97	82.353	ENSCGRG00000006722	Cmss1	99	82.353	Cricetulus_griseus_crigri
ENSCCAG00000034685	CMSS1	100	50.505	ENSCSEG00000004958	cmss1	100	51.475	Cynoglossus_semilaevis
ENSCCAG00000034685	CMSS1	100	53.952	ENSCVAG00000005039	cmss1	100	53.952	Cyprinodon_variegatus
ENSCCAG00000034685	CMSS1	100	47.508	ENSDARG00000112579	cmss1	100	46.254	Danio_rerio
ENSCCAG00000034685	CMSS1	100	86.260	ENSDNOG00000040418	CMSS1	93	86.260	Dasypus_novemcinctus
ENSCCAG00000034685	CMSS1	100	87.857	ENSDORG00000010461	Cmss1	100	87.857	Dipodomys_ordii
ENSCCAG00000034685	CMSS1	50	51.515	ENSEBUG00000002156	-	96	51.515	Eptatretus_burgeri
ENSCCAG00000034685	CMSS1	99	83.525	ENSEASG00005010966	CMSS1	99	91.781	Equus_asinus_asinus
ENSCCAG00000034685	CMSS1	98	89.147	ENSECAG00000015662	CMSS1	99	91.150	Equus_caballus
ENSCCAG00000034685	CMSS1	100	56.429	ENSEEUG00000007624	-	100	56.429	Erinaceus_europaeus
ENSCCAG00000034685	CMSS1	91	57.917	ENSELUG00000019459	cmss1	100	51.667	Esox_lucius
ENSCCAG00000034685	CMSS1	100	93.214	ENSFCAG00000044577	CMSS1	100	93.214	Felis_catus
ENSCCAG00000034685	CMSS1	90	65.401	ENSFALG00000005816	CMSS1	100	65.401	Ficedula_albicollis
ENSCCAG00000034685	CMSS1	87	90.789	ENSFDAG00000012577	CMSS1	100	90.789	Fukomys_damarensis
ENSCCAG00000034685	CMSS1	87	59.740	ENSFHEG00000012008	cmss1	95	59.740	Fundulus_heteroclitus
ENSCCAG00000034685	CMSS1	99	51.056	ENSGMOG00000016729	cmss1	100	51.568	Gadus_morhua
ENSCCAG00000034685	CMSS1	100	63.636	ENSGALG00000015267	CMSS1	100	63.985	Gallus_gallus
ENSCCAG00000034685	CMSS1	79	62.802	ENSGAFG00000021217	cmss1	77	62.871	Gambusia_affinis
ENSCCAG00000034685	CMSS1	99	48.763	ENSGACG00000002798	cmss1	100	48.763	Gasterosteus_aculeatus
ENSCCAG00000034685	CMSS1	100	63.929	ENSGAGG00000019861	CMSS1	100	63.929	Gopherus_agassizii
ENSCCAG00000034685	CMSS1	100	95.038	ENSGGOG00000014125	CMSS1	100	95.038	Gorilla_gorilla
ENSCCAG00000034685	CMSS1	100	48.980	ENSHBUG00000008431	cmss1	100	51.379	Haplochromis_burtoni
ENSCCAG00000034685	CMSS1	97	84.252	ENSHGLG00000019481	CMSS1	100	84.252	Heterocephalus_glaber_female
ENSCCAG00000034685	CMSS1	98	84.109	ENSHGLG00100010314	CMSS1	100	84.109	Heterocephalus_glaber_male
ENSCCAG00000034685	CMSS1	100	53.378	ENSHCOG00000003222	cmss1	100	54.915	Hippocampus_comes
ENSCCAG00000034685	CMSS1	100	48.986	ENSIPUG00000011591	cmss1	100	48.649	Ictalurus_punctatus
ENSCCAG00000034685	CMSS1	100	89.643	ENSSTOG00000019366	CMSS1	100	89.643	Ictidomys_tridecemlineatus
ENSCCAG00000034685	CMSS1	100	83.571	ENSJJAG00000014894	Cmss1	100	83.571	Jaculus_jaculus
ENSCCAG00000034685	CMSS1	77	54.455	ENSKMAG00000002390	cmss1	81	54.455	Kryptolebias_marmoratus
ENSCCAG00000034685	CMSS1	84	53.750	ENSLBEG00000006298	cmss1	83	59.113	Labrus_bergylta
ENSCCAG00000034685	CMSS1	87	63.913	ENSLACG00000009293	CMSS1	100	63.913	Latimeria_chalumnae
ENSCCAG00000034685	CMSS1	100	51.399	ENSLOCG00000009391	cmss1	100	52.297	Lepisosteus_oculatus
ENSCCAG00000034685	CMSS1	87	90.351	ENSLAFG00000017509	CMSS1	100	90.351	Loxodonta_africana
ENSCCAG00000034685	CMSS1	100	95.420	ENSMFAG00000045006	CMSS1	100	95.420	Macaca_fascicularis
ENSCCAG00000034685	CMSS1	100	95.038	ENSMMUG00000002939	CMSS1	100	95.038	Macaca_mulatta
ENSCCAG00000034685	CMSS1	100	95.038	ENSMNEG00000031315	CMSS1	100	95.038	Macaca_nemestrina
ENSCCAG00000034685	CMSS1	100	94.656	ENSMLEG00000033660	CMSS1	100	94.656	Mandrillus_leucophaeus
ENSCCAG00000034685	CMSS1	100	52.349	ENSMAMG00000017176	cmss1	100	53.082	Mastacembelus_armatus
ENSCCAG00000034685	CMSS1	100	50.515	ENSMZEG00005021886	cmss1	100	51.203	Maylandia_zebra
ENSCCAG00000034685	CMSS1	87	68.860	ENSMGAG00000014360	CMSS1	100	68.860	Meleagris_gallopavo
ENSCCAG00000034685	CMSS1	100	59.286	ENSMAUG00000020609	Cmss1	100	59.286	Mesocricetus_auratus
ENSCCAG00000034685	CMSS1	100	91.786	ENSMICG00000048977	CMSS1	100	91.786	Microcebus_murinus
ENSCCAG00000034685	CMSS1	100	81.071	ENSMOCG00000021937	Cmss1	100	81.071	Microtus_ochrogaster
ENSCCAG00000034685	CMSS1	77	61.881	ENSMMOG00000019794	cmss1	97	55.882	Mola_mola
ENSCCAG00000034685	CMSS1	98	75.385	ENSMODG00000002275	CMSS1	97	75.385	Monodelphis_domestica
ENSCCAG00000034685	CMSS1	100	52.901	ENSMALG00000004250	cmss1	100	52.921	Monopterus_albus
ENSCCAG00000034685	CMSS1	100	81.495	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.495	Mus_caroli
ENSCCAG00000034685	CMSS1	100	82.206	ENSMUSG00000022748	Cmss1	100	82.206	Mus_musculus
ENSCCAG00000034685	CMSS1	100	80.783	MGP_PahariEiJ_G0016524	Cmss1	100	80.783	Mus_pahari
ENSCCAG00000034685	CMSS1	100	81.495	MGP_SPRETEiJ_G0021724	Cmss1	100	81.495	Mus_spretus
ENSCCAG00000034685	CMSS1	99	91.954	ENSMPUG00000011324	CMSS1	100	92.720	Mustela_putorius_furo
ENSCCAG00000034685	CMSS1	99	91.221	ENSMLUG00000001131	CMSS1	99	91.571	Myotis_lucifugus
ENSCCAG00000034685	CMSS1	99	86.486	ENSNGAG00000020316	Cmss1	100	85.357	Nannospalax_galili
ENSCCAG00000034685	CMSS1	100	48.845	ENSNBRG00000003095	cmss1	100	51.203	Neolamprologus_brichardi
ENSCCAG00000034685	CMSS1	100	96.071	ENSNLEG00000034172	CMSS1	100	96.071	Nomascus_leucogenys
ENSCCAG00000034685	CMSS1	87	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSCCAG00000034685	CMSS1	100	91.071	ENSOPRG00000002986	CMSS1	100	91.071	Ochotona_princeps
ENSCCAG00000034685	CMSS1	100	86.071	ENSODEG00000005226	-	100	86.071	Octodon_degus
ENSCCAG00000034685	CMSS1	100	80.851	ENSODEG00000003558	-	100	80.851	Octodon_degus
ENSCCAG00000034685	CMSS1	100	75.000	ENSODEG00000001853	-	100	75.000	Octodon_degus
ENSCCAG00000034685	CMSS1	100	69.643	ENSODEG00000009446	-	100	69.643	Octodon_degus
ENSCCAG00000034685	CMSS1	77	61.386	ENSONIG00000006678	cmss1	93	55.372	Oreochromis_niloticus
ENSCCAG00000034685	CMSS1	98	72.308	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSCCAG00000034685	CMSS1	100	90.840	ENSOCUG00000025366	CMSS1	95	90.840	Oryctolagus_cuniculus
ENSCCAG00000034685	CMSS1	100	52.055	ENSORLG00000020340	cmss1	100	52.055	Oryzias_latipes
ENSCCAG00000034685	CMSS1	87	54.585	ENSORLG00020012235	cmss1	98	54.348	Oryzias_latipes_hni
ENSCCAG00000034685	CMSS1	77	56.436	ENSORLG00015015551	cmss1	75	56.436	Oryzias_latipes_hsok
ENSCCAG00000034685	CMSS1	100	52.881	ENSOMEG00000012555	cmss1	100	54.325	Oryzias_melastigma
ENSCCAG00000034685	CMSS1	87	92.105	ENSOGAG00000002045	CMSS1	100	92.105	Otolemur_garnettii
ENSCCAG00000034685	CMSS1	98	89.189	ENSOARG00000017899	CMSS1	89	89.189	Ovis_aries
ENSCCAG00000034685	CMSS1	100	94.275	ENSPPAG00000038515	CMSS1	95	94.981	Pan_paniscus
ENSCCAG00000034685	CMSS1	100	92.857	ENSPPRG00000016767	CMSS1	100	92.857	Panthera_pardus
ENSCCAG00000034685	CMSS1	100	92.500	ENSPTIG00000018274	CMSS1	100	92.500	Panthera_tigris_altaica
ENSCCAG00000034685	CMSS1	100	94.643	ENSPTRG00000015157	CMSS1	100	94.694	Pan_troglodytes
ENSCCAG00000034685	CMSS1	100	91.221	ENSPANG00000019980	CMSS1	99	91.892	Papio_anubis
ENSCCAG00000034685	CMSS1	86	60.435	ENSPKIG00000012609	cmss1	97	55.725	Paramormyrops_kingsleyae
ENSCCAG00000034685	CMSS1	87	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSCCAG00000034685	CMSS1	84	57.965	ENSPMGG00000010286	cmss1	87	61.576	Periophthalmus_magnuspinnatus
ENSCCAG00000034685	CMSS1	100	82.206	ENSPEMG00000016384	Cmss1	100	82.206	Peromyscus_maniculatus_bairdii
ENSCCAG00000034685	CMSS1	78	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSCCAG00000034685	CMSS1	99	75.191	ENSPCIG00000015656	CMSS1	98	75.769	Phascolarctos_cinereus
ENSCCAG00000034685	CMSS1	100	49.671	ENSPFOG00000016849	cmss1	100	53.147	Poecilia_formosa
ENSCCAG00000034685	CMSS1	100	49.342	ENSPLAG00000008323	cmss1	100	52.797	Poecilia_latipinna
ENSCCAG00000034685	CMSS1	100	50.000	ENSPMEG00000021020	cmss1	100	53.125	Poecilia_mexicana
ENSCCAG00000034685	CMSS1	89	59.167	ENSPREG00000007618	cmss1	82	59.167	Poecilia_reticulata
ENSCCAG00000034685	CMSS1	100	93.571	ENSPPYG00000013606	CMSS1	100	93.571	Pongo_abelii
ENSCCAG00000034685	CMSS1	100	91.786	ENSPCOG00000020035	CMSS1	100	91.786	Propithecus_coquereli
ENSCCAG00000034685	CMSS1	100	79.643	ENSPVAG00000017031	CMSS1	100	79.643	Pteropus_vampyrus
ENSCCAG00000034685	CMSS1	91	50.566	ENSPNYG00000013428	cmss1	97	51.321	Pundamilia_nyererei
ENSCCAG00000034685	CMSS1	100	49.495	ENSPNAG00000007912	cmss1	100	49.495	Pygocentrus_nattereri
ENSCCAG00000034685	CMSS1	99	81.226	ENSRNOG00000027888	Cmss1	100	81.226	Rattus_norvegicus
ENSCCAG00000034685	CMSS1	100	93.571	ENSRBIG00000037931	CMSS1	100	93.571	Rhinopithecus_bieti
ENSCCAG00000034685	CMSS1	100	93.571	ENSRROG00000042910	CMSS1	100	93.571	Rhinopithecus_roxellana
ENSCCAG00000034685	CMSS1	100	97.710	ENSSBOG00000030980	CMSS1	100	97.710	Saimiri_boliviensis_boliviensis
ENSCCAG00000034685	CMSS1	95	75.000	ENSSHAG00000009321	CMSS1	99	75.000	Sarcophilus_harrisii
ENSCCAG00000034685	CMSS1	100	55.782	ENSSFOG00015001509	cmss1	100	55.782	Scleropages_formosus
ENSCCAG00000034685	CMSS1	100	53.265	ENSSMAG00000001653	cmss1	100	53.265	Scophthalmus_maximus
ENSCCAG00000034685	CMSS1	100	53.082	ENSSDUG00000007719	cmss1	100	54.266	Seriola_dumerili
ENSCCAG00000034685	CMSS1	79	63.768	ENSSLDG00000012300	cmss1	98	49.378	Seriola_lalandi_dorsalis
ENSCCAG00000034685	CMSS1	100	74.733	ENSSARG00000003584	CMSS1	100	74.733	Sorex_araneus
ENSCCAG00000034685	CMSS1	86	70.354	ENSSPUG00000003865	CMSS1	100	70.354	Sphenodon_punctatus
ENSCCAG00000034685	CMSS1	79	64.078	ENSSPAG00000019182	cmss1	82	54.851	Stegastes_partitus
ENSCCAG00000034685	CMSS1	100	92.500	ENSSSCG00000011970	CMSS1	100	92.500	Sus_scrofa
ENSCCAG00000034685	CMSS1	87	66.812	ENSTGUG00000013635	CMSS1	100	66.812	Taeniopygia_guttata
ENSCCAG00000034685	CMSS1	100	51.056	ENSTRUG00000015265	cmss1	100	52.465	Takifugu_rubripes
ENSCCAG00000034685	CMSS1	77	56.436	ENSTNIG00000002880	cmss1	86	51.681	Tetraodon_nigroviridis
ENSCCAG00000034685	CMSS1	100	60.714	ENSTBEG00000016722	CMSS1	100	60.714	Tupaia_belangeri
ENSCCAG00000034685	CMSS1	100	87.500	ENSTTRG00000001562	CMSS1	100	87.500	Tursiops_truncatus
ENSCCAG00000034685	CMSS1	99	91.154	ENSUAMG00000024209	CMSS1	100	94.170	Ursus_americanus
ENSCCAG00000034685	CMSS1	99	91.120	ENSUMAG00000001983	CMSS1	99	90.734	Ursus_maritimus
ENSCCAG00000034685	CMSS1	100	67.500	ENSVPAG00000000263	CMSS1	100	67.500	Vicugna_pacos
ENSCCAG00000034685	CMSS1	77	94.554	ENSVVUG00000007776	-	80	94.554	Vulpes_vulpes
ENSCCAG00000034685	CMSS1	94	91.463	ENSVVUG00000021647	-	100	91.463	Vulpes_vulpes
ENSCCAG00000034685	CMSS1	100	55.319	ENSXETG00000011858	cmss1	100	55.319	Xenopus_tropicalis
ENSCCAG00000034685	CMSS1	79	62.019	ENSXCOG00000018724	cmss1	69	62.376	Xiphophorus_couchianus
ENSCCAG00000034685	CMSS1	79	62.019	ENSXMAG00000011243	cmss1	76	62.376	Xiphophorus_maculatus