EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000034792 (Gene tree)
Gene ID: 108306550
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 30500 bases
Position: chrKV389498.1:6326335-6356834
Accession: 108306550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000033837	ResIII	PF04851.15	2.7e-08	1	1
ENSCCAP00000033858	ResIII	PF04851.15	2.7e-08	1	1
ENSCCAP00000033825	ResIII	PF04851.15	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000051630	CHD3-203	7377	XM_017531560	ENSCCAP00000033858	2000 (aa)	XP_017387049	A0A2K5S0D1
ENSCCAT00000051597	CHD3-201	10518	XM_017531548	ENSCCAP00000033825	2059 (aa)	XP_017387037	A0A2K5S0D5
ENSCCAT00000051609	CHD3-202	10416	XM_017531555	ENSCCAP00000033837	2025 (aa)	XP_017387044	A0A2K5S0B7
ENSCCAT00000051635	CHD3-204	1188	-	ENSCCAP00000033863	395 (aa)	-	A0A2K5S0D7

Gene Model

Click here to download ENSCCAG00000034792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034792's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000034792	CHD3	92	68.672	ENSCCAG00000024756	CHD5	97	68.839
ENSCCAG00000034792	CHD3	86	70.930	ENSCCAG00000009686	-	96	70.086

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034792	CHD3	100	99.466	ENSG00000170004	CHD3	100	99.466	Homo_sapiens
ENSCCAG00000034792	CHD3	79	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSCCAG00000034792	CHD3	68	97.067	ENSAMEG00000003025	-	100	97.067	Ailuropoda_melanoleuca
ENSCCAG00000034792	CHD3	79	83.516	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSCCAG00000034792	CHD3	88	81.100	ENSAOCG00000023784	chd3	97	81.675	Amphiprion_ocellaris
ENSCCAG00000034792	CHD3	88	80.756	ENSAPEG00000006341	chd3	95	77.664	Amphiprion_percula
ENSCCAG00000034792	CHD3	97	73.035	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSCCAG00000034792	CHD3	96	85.509	ENSACAG00000004276	CHD3	96	84.980	Anolis_carolinensis
ENSCCAG00000034792	CHD3	100	96.750	ENSANAG00000034323	CHD3	99	99.467	Aotus_nancymaae
ENSCCAG00000034792	CHD3	91	78.816	ENSACLG00000009222	chd3	99	74.804	Astatotilapia_calliptera
ENSCCAG00000034792	CHD3	100	98.011	ENSBTAG00000014377	CHD3	100	98.011	Bos_taurus
ENSCCAG00000034792	CHD3	100	99.450	ENSCJAG00000014766	CHD3	100	99.450	Callithrix_jacchus
ENSCCAG00000034792	CHD3	100	97.751	ENSCAFG00000016859	CHD3	100	97.751	Canis_familiaris
ENSCCAG00000034792	CHD3	94	98.242	ENSCAFG00020007422	CHD3	100	98.363	Canis_lupus_dingo
ENSCCAG00000034792	CHD3	99	98.282	ENSCHIG00000016737	CHD3	100	98.282	Capra_hircus
ENSCCAG00000034792	CHD3	100	98.501	ENSTSYG00000035658	CHD3	100	98.501	Carlito_syrichta
ENSCCAG00000034792	CHD3	99	94.631	ENSCAPG00000014864	CHD3	99	94.631	Cavia_aperea
ENSCCAG00000034792	CHD3	99	97.140	ENSCPOG00000022653	CHD3	99	97.140	Cavia_porcellus
ENSCCAG00000034792	CHD3	100	99.223	ENSCATG00000041717	CHD3	100	99.223	Cercocebus_atys
ENSCCAG00000034792	CHD3	98	98.424	ENSCLAG00000010523	CHD3	100	98.448	Chinchilla_lanigera
ENSCCAG00000034792	CHD3	98	99.086	ENSCSAG00000011122	CHD3	100	99.086	Chlorocebus_sabaeus
ENSCCAG00000034792	CHD3	89	83.092	ENSCPBG00000011966	CHD3	99	87.627	Chrysemys_picta_bellii
ENSCCAG00000034792	CHD3	100	99.000	ENSCANG00000037641	CHD3	100	99.000	Colobus_angolensis_palliatus
ENSCCAG00000034792	CHD3	98	97.307	ENSCGRG00001011306	Chd3	100	97.466	Cricetulus_griseus_chok1gshd
ENSCCAG00000034792	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSCCAG00000034792	CHD3	89	79.605	ENSCSEG00000004489	chd3	99	76.156	Cynoglossus_semilaevis
ENSCCAG00000034792	CHD3	86	82.072	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSCCAG00000034792	CHD3	89	80.468	ENSDARG00000021405	chd3	99	76.567	Danio_rerio
ENSCCAG00000034792	CHD3	98	83.612	ENSDNOG00000047846	CHD3	98	83.612	Dasypus_novemcinctus
ENSCCAG00000034792	CHD3	98	97.915	ENSDORG00000010713	Chd3	100	98.033	Dipodomys_ordii
ENSCCAG00000034792	CHD3	96	91.956	ENSETEG00000017733	CHD3	100	91.956	Echinops_telfairi
ENSCCAG00000034792	CHD3	53	77.646	ENSEBUG00000008310	chd3	99	70.328	Eptatretus_burgeri
ENSCCAG00000034792	CHD3	92	98.691	ENSEASG00005019360	CHD3	100	98.691	Equus_asinus_asinus
ENSCCAG00000034792	CHD3	92	98.745	ENSECAG00000010051	CHD3	100	98.745	Equus_caballus
ENSCCAG00000034792	CHD3	91	96.610	ENSEEUG00000015205	CHD3	92	98.077	Erinaceus_europaeus
ENSCCAG00000034792	CHD3	77	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSCCAG00000034792	CHD3	100	98.107	ENSFCAG00000009629	CHD3	100	98.107	Felis_catus
ENSCCAG00000034792	CHD3	99	95.159	ENSFDAG00000008220	CHD3	99	96.037	Fukomys_damarensis
ENSCCAG00000034792	CHD3	87	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSCCAG00000034792	CHD3	58	74.915	ENSGAFG00000004055	chd3	99	76.581	Gambusia_affinis
ENSCCAG00000034792	CHD3	97	70.943	ENSGACG00000019275	chd3	100	71.047	Gasterosteus_aculeatus
ENSCCAG00000034792	CHD3	75	85.733	ENSGAGG00000013164	CHD3	98	87.169	Gopherus_agassizii
ENSCCAG00000034792	CHD3	100	99.100	ENSGGOG00000013496	CHD3	100	99.100	Gorilla_gorilla
ENSCCAG00000034792	CHD3	99	98.217	ENSHGLG00000012017	CHD3	100	98.217	Heterocephalus_glaber_female
ENSCCAG00000034792	CHD3	88	91.159	ENSHGLG00100013902	CHD3	99	91.159	Heterocephalus_glaber_male
ENSCCAG00000034792	CHD3	93	72.821	ENSHCOG00000010170	chd3	96	73.357	Hippocampus_comes
ENSCCAG00000034792	CHD3	83	80.424	ENSIPUG00000003271	chd3	96	80.848	Ictalurus_punctatus
ENSCCAG00000034792	CHD3	99	98.249	ENSSTOG00000025907	CHD3	100	98.810	Ictidomys_tridecemlineatus
ENSCCAG00000034792	CHD3	99	96.697	ENSJJAG00000017633	Chd3	100	97.569	Jaculus_jaculus
ENSCCAG00000034792	CHD3	85	90.047	ENSKMAG00000019292	chd3	97	75.903	Kryptolebias_marmoratus
ENSCCAG00000034792	CHD3	92	70.901	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSCCAG00000034792	CHD3	95	74.194	ENSLACG00000008031	CHD3	98	75.140	Latimeria_chalumnae
ENSCCAG00000034792	CHD3	96	77.174	ENSLOCG00000013965	chd3	97	77.177	Lepisosteus_oculatus
ENSCCAG00000034792	CHD3	94	94.383	ENSLAFG00000000572	CHD3	100	94.383	Loxodonta_africana
ENSCCAG00000034792	CHD3	100	99.000	ENSMFAG00000020113	CHD3	100	99.000	Macaca_fascicularis
ENSCCAG00000034792	CHD3	100	96.650	ENSMMUG00000022221	CHD3	100	96.650	Macaca_mulatta
ENSCCAG00000034792	CHD3	100	99.000	ENSMNEG00000001728	CHD3	100	99.000	Macaca_nemestrina
ENSCCAG00000034792	CHD3	100	99.050	ENSMLEG00000032249	CHD3	100	99.050	Mandrillus_leucophaeus
ENSCCAG00000034792	CHD3	85	75.630	ENSMAMG00000000564	chd3	99	77.406	Mastacembelus_armatus
ENSCCAG00000034792	CHD3	100	96.053	ENSMAUG00000013873	Chd3	100	96.053	Mesocricetus_auratus
ENSCCAG00000034792	CHD3	100	98.689	ENSMICG00000008741	CHD3	100	98.689	Microcebus_murinus
ENSCCAG00000034792	CHD3	98	97.352	ENSMOCG00000004848	Chd3	100	97.512	Microtus_ochrogaster
ENSCCAG00000034792	CHD3	94	74.180	ENSMMOG00000012699	chd3	99	74.094	Mola_mola
ENSCCAG00000034792	CHD3	92	92.803	ENSMODG00000007509	CHD3	100	94.556	Monodelphis_domestica
ENSCCAG00000034792	CHD3	99	96.838	MGP_CAROLIEiJ_G0016564	Chd3	100	97.402	Mus_caroli
ENSCCAG00000034792	CHD3	100	96.895	ENSMUSG00000018474	Chd3	100	96.895	Mus_musculus
ENSCCAG00000034792	CHD3	99	97.084	MGP_PahariEiJ_G0017695	Chd3	100	97.613	Mus_pahari
ENSCCAG00000034792	CHD3	100	96.704	MGP_SPRETEiJ_G0017400	Chd3	100	97.508	Mus_spretus
ENSCCAG00000034792	CHD3	86	98.016	ENSMPUG00000008861	CHD3	100	98.016	Mustela_putorius_furo
ENSCCAG00000034792	CHD3	100	96.753	ENSMLUG00000014643	-	100	96.753	Myotis_lucifugus
ENSCCAG00000034792	CHD3	99	97.179	ENSNGAG00000000773	Chd3	99	97.179	Nannospalax_galili
ENSCCAG00000034792	CHD3	85	75.396	ENSNBRG00000000636	chd3	97	76.758	Neolamprologus_brichardi
ENSCCAG00000034792	CHD3	99	95.221	ENSNLEG00000009770	CHD3	100	96.158	Nomascus_leucogenys
ENSCCAG00000034792	CHD3	82	93.675	ENSMEUG00000005852	CHD3	86	93.675	Notamacropus_eugenii
ENSCCAG00000034792	CHD3	94	96.688	ENSOPRG00000011069	CHD3	100	96.688	Ochotona_princeps
ENSCCAG00000034792	CHD3	99	97.437	ENSODEG00000017785	CHD3	100	97.437	Octodon_degus
ENSCCAG00000034792	CHD3	94	74.857	ENSONIG00000009292	chd3	100	74.845	Oreochromis_niloticus
ENSCCAG00000034792	CHD3	98	93.740	ENSOCUG00000029299	CHD3	100	93.642	Oryctolagus_cuniculus
ENSCCAG00000034792	CHD3	82	70.716	ENSORLG00000007107	chd3	93	71.973	Oryzias_latipes
ENSCCAG00000034792	CHD3	56	73.016	ENSORLG00020008387	chd3	95	73.786	Oryzias_latipes_hni
ENSCCAG00000034792	CHD3	70	80.243	ENSOMEG00000013691	chd3	99	78.308	Oryzias_melastigma
ENSCCAG00000034792	CHD3	98	98.274	ENSOGAG00000003216	CHD3	100	98.274	Otolemur_garnettii
ENSCCAG00000034792	CHD3	99	95.604	ENSOARG00000017855	CHD3	99	95.992	Ovis_aries
ENSCCAG00000034792	CHD3	100	96.895	ENSPPAG00000032886	CHD3	100	96.895	Pan_paniscus
ENSCCAG00000034792	CHD3	99	97.649	ENSPPRG00000000626	CHD3	100	97.926	Panthera_pardus
ENSCCAG00000034792	CHD3	100	99.563	ENSPTRG00000008714	CHD3	100	99.563	Pan_troglodytes
ENSCCAG00000034792	CHD3	100	99.050	ENSPANG00000023938	CHD3	100	99.050	Papio_anubis
ENSCCAG00000034792	CHD3	94	79.489	ENSPKIG00000006305	chd3	99	79.565	Paramormyrops_kingsleyae
ENSCCAG00000034792	CHD3	54	90.602	ENSPSIG00000010177	CHD3	98	90.876	Pelodiscus_sinensis
ENSCCAG00000034792	CHD3	99	96.773	ENSPEMG00000014262	Chd3	100	96.773	Peromyscus_maniculatus_bairdii
ENSCCAG00000034792	CHD3	99	92.273	ENSPCIG00000005442	CHD3	99	94.193	Phascolarctos_cinereus
ENSCCAG00000034792	CHD3	88	80.000	ENSPFOG00000012464	chd3	87	79.866	Poecilia_formosa
ENSCCAG00000034792	CHD3	86	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSCCAG00000034792	CHD3	52	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSCCAG00000034792	CHD3	90	84.502	ENSPREG00000011044	chd3	99	77.942	Poecilia_reticulata
ENSCCAG00000034792	CHD3	100	94.350	ENSPPYG00000007940	CHD3	98	96.371	Pongo_abelii
ENSCCAG00000034792	CHD3	95	97.761	ENSPCAG00000004350	CHD3	96	97.761	Procavia_capensis
ENSCCAG00000034792	CHD3	100	98.002	ENSPCOG00000020952	CHD3	100	98.687	Propithecus_coquereli
ENSCCAG00000034792	CHD3	85	96.956	ENSPVAG00000016344	CHD3	87	96.956	Pteropus_vampyrus
ENSCCAG00000034792	CHD3	91	78.715	ENSPNAG00000020393	chd3	98	81.611	Pygocentrus_nattereri
ENSCCAG00000034792	CHD3	92	96.732	ENSRNOG00000009722	Chd3	100	96.732	Rattus_norvegicus
ENSCCAG00000034792	CHD3	100	95.901	ENSRBIG00000033562	CHD3	100	95.901	Rhinopithecus_bieti
ENSCCAG00000034792	CHD3	100	97.450	ENSRROG00000029554	CHD3	100	97.450	Rhinopithecus_roxellana
ENSCCAG00000034792	CHD3	100	99.600	ENSSBOG00000020719	CHD3	100	99.600	Saimiri_boliviensis_boliviensis
ENSCCAG00000034792	CHD3	98	93.265	ENSSHAG00000014412	CHD3	100	94.912	Sarcophilus_harrisii
ENSCCAG00000034792	CHD3	86	80.157	ENSSFOG00015023123	chd3	98	75.576	Scleropages_formosus
ENSCCAG00000034792	CHD3	77	91.304	ENSSMAG00000006451	chd3	99	77.237	Scophthalmus_maximus
ENSCCAG00000034792	CHD3	55	72.570	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSCCAG00000034792	CHD3	88	80.756	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSCCAG00000034792	CHD3	99	98.174	ENSSSCG00000021363	CHD3	100	98.201	Sus_scrofa
ENSCCAG00000034792	CHD3	74	76.560	ENSTRUG00000014990	chd3	89	76.335	Takifugu_rubripes
ENSCCAG00000034792	CHD3	96	72.829	ENSTNIG00000012998	chd3	99	73.151	Tetraodon_nigroviridis
ENSCCAG00000034792	CHD3	63	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCCAG00000034792	CHD3	97	99.383	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSCCAG00000034792	CHD3	92	97.115	ENSUAMG00000005475	CHD3	99	97.115	Ursus_americanus
ENSCCAG00000034792	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCCAG00000034792	CHD3	94	98.356	ENSVVUG00000028011	CHD3	99	98.242	Vulpes_vulpes
ENSCCAG00000034792	CHD3	97	72.487	ENSXETG00000012991	chd3	97	71.139	Xenopus_tropicalis
ENSCCAG00000034792	CHD3	51	82.864	ENSXCOG00000000809	chd3	96	83.089	Xiphophorus_couchianus
ENSCCAG00000034792	CHD3	80	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus