EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000034928 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C-like
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 22161 bases
Position: chrKV390155.1:28561-50721
Accession: 108296625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000034133	eIF-3c_N	PF05470.12	3.9e-277	1	1
ENSCCAP00000034121	eIF-3c_N	PF05470.12	1.5e-273	1	1
ENSCCAP00000034138	eIF-3c_N	PF05470.12	9.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000051910	-	201	-	ENSCCAP00000034138	66 (aa)	-	A0A2K5S164
ENSCCAT00000051905	-	2664	-	ENSCCAP00000034133	887 (aa)	-	A0A2K5S161
ENSCCAT00000051893	-	2718	XM_017519111	ENSCCAP00000034121	905 (aa)	XP_017374600	A0A2K5S182

Gene Model

Click here to download ENSCCAG00000034928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000034928	-	100	93.538	ENSCCAG00000027724	-	100	92.771
ENSCCAG00000034928	-	99	83.778	ENSCCAG00000029099	-	99	82.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034928	-	100	98.686	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSCCAG00000034928	-	100	98.578	ENSG00000205609	EIF3CL	100	98.578	Homo_sapiens
ENSCCAG00000034928	-	99	75.353	ENSAPOG00000024092	eif3c	92	84.339	Acanthochromis_polyacanthus
ENSCCAG00000034928	-	100	97.590	ENSAMEG00000015454	-	100	97.590	Ailuropoda_melanoleuca
ENSCCAG00000034928	-	99	73.952	ENSACIG00000015082	eif3c	99	74.263	Amphilophus_citrinellus
ENSCCAG00000034928	-	94	84.158	ENSAOCG00000021466	eif3c	98	76.362	Amphiprion_ocellaris
ENSCCAG00000034928	-	94	84.158	ENSAPEG00000010521	eif3c	98	76.362	Amphiprion_percula
ENSCCAG00000034928	-	99	75.515	ENSATEG00000019001	eif3c	98	76.170	Anabas_testudineus
ENSCCAG00000034928	-	100	85.464	ENSACAG00000005937	-	100	85.699	Anolis_carolinensis
ENSCCAG00000034928	-	100	100.000	ENSANAG00000020640	-	100	100.000	Aotus_nancymaae
ENSCCAG00000034928	-	86	80.619	ENSACLG00000009322	eif3c	92	80.619	Astatotilapia_calliptera
ENSCCAG00000034928	-	86	83.471	ENSACLG00000009347	eif3c	94	83.471	Astatotilapia_calliptera
ENSCCAG00000034928	-	99	76.374	ENSAMXG00000020949	eif3c	98	75.519	Astyanax_mexicanus
ENSCCAG00000034928	-	100	97.039	ENSBTAG00000006543	EIF3CL	100	97.039	Bos_taurus
ENSCCAG00000034928	-	95	42.697	WBGene00001226	eif-3.C	93	43.424	Caenorhabditis_elegans
ENSCCAG00000034928	-	100	100.000	ENSCJAG00000006341	-	100	100.000	Callithrix_jacchus
ENSCCAG00000034928	-	100	97.590	ENSCAFG00000017143	-	100	97.590	Canis_familiaris
ENSCCAG00000034928	-	100	97.700	ENSCAFG00020017587	-	100	97.700	Canis_lupus_dingo
ENSCCAG00000034928	-	100	96.930	ENSCHIG00000024795	-	100	96.930	Capra_hircus
ENSCCAG00000034928	-	100	97.371	ENSTSYG00000003486	-	100	97.371	Carlito_syrichta
ENSCCAG00000034928	-	96	87.429	ENSCAPG00000015887	-	100	87.429	Cavia_aperea
ENSCCAG00000034928	-	100	96.933	ENSCPOG00000007533	-	100	96.933	Cavia_porcellus
ENSCCAG00000034928	-	100	100.000	ENSCATG00000032673	-	100	100.000	Cercocebus_atys
ENSCCAG00000034928	-	100	96.495	ENSCLAG00000011094	-	100	96.495	Chinchilla_lanigera
ENSCCAG00000034928	-	100	98.576	ENSCSAG00000006297	-	100	98.576	Chlorocebus_sabaeus
ENSCCAG00000034928	-	56	82.239	ENSCHOG00000003120	-	88	82.239	Choloepus_hoffmanni
ENSCCAG00000034928	-	72	92.038	ENSCPBG00000012407	-	90	83.660	Chrysemys_picta_bellii
ENSCCAG00000034928	-	81	56.336	ENSCSAVG00000006744	-	96	57.018	Ciona_savignyi
ENSCCAG00000034928	-	100	100.000	ENSCANG00000033626	-	100	100.000	Colobus_angolensis_palliatus
ENSCCAG00000034928	-	100	95.728	ENSCGRG00001015265	EIF3C	100	95.728	Cricetulus_griseus_chok1gshd
ENSCCAG00000034928	-	91	86.667	ENSCGRG00000006124	-	83	93.269	Cricetulus_griseus_crigri
ENSCCAG00000034928	-	100	74.098	ENSCSEG00000017770	eif3c	100	74.208	Cynoglossus_semilaevis
ENSCCAG00000034928	-	99	74.755	ENSCVAG00000005402	eif3c	98	81.656	Cyprinodon_variegatus
ENSCCAG00000034928	-	99	75.983	ENSDARG00000016443	eif3c	98	75.843	Danio_rerio
ENSCCAG00000034928	-	100	97.262	ENSDNOG00000031497	-	100	97.262	Dasypus_novemcinctus
ENSCCAG00000034928	-	100	97.152	ENSDORG00000016471	Eif3c	100	97.152	Dipodomys_ordii
ENSCCAG00000034928	-	98	50.668	FBgn0034258	eIF3c	95	51.505	Drosophila_melanogaster
ENSCCAG00000034928	-	92	98.624	ENSETEG00000013527	-	92	98.624	Echinops_telfairi
ENSCCAG00000034928	-	99	63.129	ENSEBUG00000001629	eif3c	99	63.952	Eptatretus_burgeri
ENSCCAG00000034928	-	100	97.371	ENSECAG00000008746	-	100	97.371	Equus_caballus
ENSCCAG00000034928	-	87	95.990	ENSEEUG00000006148	-	100	95.990	Erinaceus_europaeus
ENSCCAG00000034928	-	66	64.286	ENSEEUG00000000726	-	64	64.286	Erinaceus_europaeus
ENSCCAG00000034928	-	99	75.682	ENSELUG00000022257	eif3c	92	83.748	Esox_lucius
ENSCCAG00000034928	-	100	97.262	ENSFCAG00000015782	-	100	97.262	Felis_catus
ENSCCAG00000034928	-	100	97.043	ENSFDAG00000003588	-	100	97.043	Fukomys_damarensis
ENSCCAG00000034928	-	100	75.808	ENSFHEG00000014154	EIF3C	100	76.392	Fundulus_heteroclitus
ENSCCAG00000034928	-	97	75.000	ENSGMOG00000016885	eif3c	99	75.421	Gadus_morhua
ENSCCAG00000034928	-	59	84.615	ENSGALG00000047139	-	65	85.714	Gallus_gallus
ENSCCAG00000034928	-	96	75.593	ENSGACG00000007652	eif3c	100	75.109	Gasterosteus_aculeatus
ENSCCAG00000034928	-	92	82.999	ENSGAGG00000006666	-	100	83.235	Gopherus_agassizii
ENSCCAG00000034928	-	99	96.150	ENSGGOG00000026919	EIF3C	100	98.407	Gorilla_gorilla
ENSCCAG00000034928	-	53	99.614	ENSGGOG00000022677	-	100	99.614	Gorilla_gorilla
ENSCCAG00000034928	-	100	96.824	ENSHGLG00000011445	EIF3C	100	96.824	Heterocephalus_glaber_female
ENSCCAG00000034928	-	100	96.824	ENSHGLG00100000217	EIF3C	100	96.824	Heterocephalus_glaber_male
ENSCCAG00000034928	-	99	74.783	ENSHCOG00000019694	eif3c	98	75.218	Hippocampus_comes
ENSCCAG00000034928	-	86	84.390	ENSIPUG00000016878	eif3c	98	76.035	Ictalurus_punctatus
ENSCCAG00000034928	-	100	97.371	ENSSTOG00000021278	-	100	97.371	Ictidomys_tridecemlineatus
ENSCCAG00000034928	-	100	95.947	ENSJJAG00000012722	Eif3c	100	95.947	Jaculus_jaculus
ENSCCAG00000034928	-	99	76.406	ENSKMAG00000021662	eif3c	97	75.791	Kryptolebias_marmoratus
ENSCCAG00000034928	-	99	74.807	ENSLBEG00000023370	eif3c	99	74.114	Labrus_bergylta
ENSCCAG00000034928	-	100	78.470	ENSLACG00000000770	eif3c	100	79.826	Latimeria_chalumnae
ENSCCAG00000034928	-	100	96.824	ENSLAFG00000027426	-	100	96.824	Loxodonta_africana
ENSCCAG00000034928	-	100	100.000	ENSMFAG00000041930	-	100	100.000	Macaca_fascicularis
ENSCCAG00000034928	-	100	98.576	ENSMMUG00000011798	-	100	98.576	Macaca_mulatta
ENSCCAG00000034928	-	100	100.000	ENSMNEG00000023915	-	100	100.000	Macaca_nemestrina
ENSCCAG00000034928	-	100	100.000	ENSMLEG00000027529	-	100	100.000	Mandrillus_leucophaeus
ENSCCAG00000034928	-	99	78.390	ENSMAMG00000012512	eif3c	94	84.667	Mastacembelus_armatus
ENSCCAG00000034928	-	86	80.782	ENSMZEG00005013685	eif3c	92	80.782	Maylandia_zebra
ENSCCAG00000034928	-	99	72.444	ENSMZEG00005013699	eif3c	94	83.471	Maylandia_zebra
ENSCCAG00000034928	-	100	95.838	ENSMAUG00000010621	Eif3c	100	95.838	Mesocricetus_auratus
ENSCCAG00000034928	-	100	97.262	ENSMICG00000036748	-	100	97.262	Microcebus_murinus
ENSCCAG00000034928	-	100	93.202	ENSMOCG00000004204	Eif3c	100	93.202	Microtus_ochrogaster
ENSCCAG00000034928	-	100	72.860	ENSMMOG00000001572	eif3c	100	72.402	Mola_mola
ENSCCAG00000034928	-	100	93.873	ENSMODG00000015579	-	100	93.873	Monodelphis_domestica
ENSCCAG00000034928	-	86	84.577	ENSMALG00000008907	eif3c	92	84.437	Monopterus_albus
ENSCCAG00000034928	-	100	95.455	MGP_CAROLIEiJ_G0030451	Eif3c	100	95.455	Mus_caroli
ENSCCAG00000034928	-	100	95.455	ENSMUSG00000030738	Eif3c	100	95.455	Mus_musculus
ENSCCAG00000034928	-	100	95.455	MGP_PahariEiJ_G0013661	Eif3c	100	95.455	Mus_pahari
ENSCCAG00000034928	-	100	95.455	MGP_SPRETEiJ_G0031565	Eif3c	100	95.455	Mus_spretus
ENSCCAG00000034928	-	96	96.818	ENSMPUG00000012732	-	100	96.818	Mustela_putorius_furo
ENSCCAG00000034928	-	100	95.838	ENSMLUG00000015558	-	100	95.838	Myotis_lucifugus
ENSCCAG00000034928	-	100	96.714	ENSNGAG00000007177	-	100	96.714	Nannospalax_galili
ENSCCAG00000034928	-	93	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSCCAG00000034928	-	100	100.000	ENSNLEG00000001425	-	100	100.000	Nomascus_leucogenys
ENSCCAG00000034928	-	100	76.721	ENSMEUG00000009939	-	99	76.747	Notamacropus_eugenii
ENSCCAG00000034928	-	86	67.692	ENSMEUG00000005317	-	97	64.615	Notamacropus_eugenii
ENSCCAG00000034928	-	100	96.824	ENSOPRG00000000931	-	100	96.824	Ochotona_princeps
ENSCCAG00000034928	-	100	96.605	ENSODEG00000013508	-	100	96.605	Octodon_degus
ENSCCAG00000034928	-	68	63.201	ENSONIG00000011434	eif3c	99	63.201	Oreochromis_niloticus
ENSCCAG00000034928	-	100	90.086	ENSOANG00000011410	-	100	90.086	Ornithorhynchus_anatinus
ENSCCAG00000034928	-	100	97.371	ENSOCUG00000022489	-	100	97.371	Oryctolagus_cuniculus
ENSCCAG00000034928	-	99	74.751	ENSORLG00000006318	eif3c	98	74.023	Oryzias_latipes
ENSCCAG00000034928	-	99	74.751	ENSORLG00020015713	eif3c	90	82.881	Oryzias_latipes_hni
ENSCCAG00000034928	-	99	75.388	ENSORLG00015013772	eif3c	97	74.614	Oryzias_latipes_hsok
ENSCCAG00000034928	-	100	73.707	ENSOMEG00000020450	eif3c	100	73.707	Oryzias_melastigma
ENSCCAG00000034928	-	100	97.262	ENSOGAG00000012737	-	100	97.262	Otolemur_garnettii
ENSCCAG00000034928	-	100	96.930	ENSOARG00000002892	-	100	96.930	Ovis_aries
ENSCCAG00000034928	-	100	97.262	ENSPPRG00000012336	-	100	97.262	Panthera_pardus
ENSCCAG00000034928	-	100	97.262	ENSPTIG00000011712	-	100	97.262	Panthera_tigris_altaica
ENSCCAG00000034928	-	100	100.000	ENSPANG00000021151	-	100	100.000	Papio_anubis
ENSCCAG00000034928	-	99	76.035	ENSPKIG00000002049	eif3c	98	76.688	Paramormyrops_kingsleyae
ENSCCAG00000034928	-	89	84.743	ENSPMGG00000005409	eif3c	93	84.743	Periophthalmus_magnuspinnatus
ENSCCAG00000034928	-	100	95.815	ENSPEMG00000010899	Eif3c	100	95.815	Peromyscus_maniculatus_bairdii
ENSCCAG00000034928	-	100	93.873	ENSPCIG00000025206	-	100	93.873	Phascolarctos_cinereus
ENSCCAG00000034928	-	99	75.435	ENSPFOG00000004476	eif3c	98	74.973	Poecilia_formosa
ENSCCAG00000034928	-	100	72.357	ENSPLAG00000017480	eif3c	100	73.154	Poecilia_latipinna
ENSCCAG00000034928	-	99	75.517	ENSPMEG00000019512	eif3c	100	73.962	Poecilia_mexicana
ENSCCAG00000034928	-	100	72.467	ENSPREG00000023139	eif3c	100	73.043	Poecilia_reticulata
ENSCCAG00000034928	-	100	95.290	ENSPPYG00000007227	-	100	95.290	Pongo_abelii
ENSCCAG00000034928	-	68	98.502	ENSPCAG00000012710	-	100	98.502	Procavia_capensis
ENSCCAG00000034928	-	100	97.700	ENSPCOG00000019289	-	100	97.700	Propithecus_coquereli
ENSCCAG00000034928	-	100	97.043	ENSPVAG00000005804	-	100	97.043	Pteropus_vampyrus
ENSCCAG00000034928	-	86	52.632	ENSPNYG00000016530	eif3c	81	81.818	Pundamilia_nyererei
ENSCCAG00000034928	-	99	76.368	ENSPNAG00000024040	eif3c	99	76.612	Pygocentrus_nattereri
ENSCCAG00000034928	-	100	94.737	ENSRNOG00000018761	Eif3c	100	94.737	Rattus_norvegicus
ENSCCAG00000034928	-	100	100.000	ENSRBIG00000044009	-	100	100.000	Rhinopithecus_bieti
ENSCCAG00000034928	-	100	100.000	ENSRROG00000043626	-	100	100.000	Rhinopithecus_roxellana
ENSCCAG00000034928	-	78	31.365	YMR309C	-	81	30.699	Saccharomyces_cerevisiae
ENSCCAG00000034928	-	100	100.000	ENSSBOG00000032155	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000034928	-	96	93.431	ENSSHAG00000011808	-	100	93.431	Sarcophilus_harrisii
ENSCCAG00000034928	-	99	75.463	ENSSFOG00015021823	eif3c	98	76.066	Scleropages_formosus
ENSCCAG00000034928	-	97	76.404	ENSSMAG00000016638	eif3c	97	76.708	Scophthalmus_maximus
ENSCCAG00000034928	-	100	74.642	ENSSDUG00000023117	eif3c	100	74.972	Seriola_dumerili
ENSCCAG00000034928	-	99	75.244	ENSSLDG00000009706	eif3c	93	83.660	Seriola_lalandi_dorsalis
ENSCCAG00000034928	-	100	83.899	ENSSPUG00000016470	-	100	84.136	Sphenodon_punctatus
ENSCCAG00000034928	-	100	75.649	ENSSPAG00000000426	eif3c	100	76.170	Stegastes_partitus
ENSCCAG00000034928	-	100	97.481	ENSSSCG00000034927	-	100	97.481	Sus_scrofa
ENSCCAG00000034928	-	99	73.526	ENSTRUG00000008951	eif3c	99	74.491	Takifugu_rubripes
ENSCCAG00000034928	-	100	73.261	ENSTNIG00000015210	eif3c	100	74.215	Tetraodon_nigroviridis
ENSCCAG00000034928	-	100	97.043	ENSTTRG00000005880	-	100	97.043	Tursiops_truncatus
ENSCCAG00000034928	-	74	98.931	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSCCAG00000034928	-	100	97.481	ENSUMAG00000010927	-	100	97.481	Ursus_maritimus
ENSCCAG00000034928	-	100	96.166	ENSVVUG00000025970	-	100	96.166	Vulpes_vulpes
ENSCCAG00000034928	-	100	78.463	ENSXETG00000002941	eif3c	100	78.811	Xenopus_tropicalis
ENSCCAG00000034928	-	100	75.351	ENSXMAG00000013796	eif3c	100	74.595	Xiphophorus_maculatus