EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000035140 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 3005 bases
Position: chrKV389683.1:709254-712258
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000034342	LSM	PF01423.22	1.1e-15	1	1
ENSCCAP00000034338	LSM	PF01423.22	1.3e-15	1	1
ENSCCAP00000034329	LSM	PF01423.22	2.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000052114	-	822	-	ENSCCAP00000034342	273 (aa)	-	A0A2K5S1R7
ENSCCAT00000052101	-	174	-	ENSCCAP00000034329	57 (aa)	-	A0A2K5S1Q9
ENSCCAT00000052110	-	921	-	ENSCCAP00000034338	306 (aa)	-	A0A2K5S1R8

Gene Model

Click here to download ENSCCAG00000035140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000035140	-	89	86.275	ENSCCAG00000024231	SNRPN	53	84.252
ENSCCAG00000035140	-	89	86.275	ENSCCAG00000026002	SNRPB	55	88.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035140	-	89	86.275	ENSG00000125835	SNRPB	73	86.275	Homo_sapiens
ENSCCAG00000035140	-	89	86.275	ENSAMEG00000011353	SNRPB	99	69.580	Ailuropoda_melanoleuca
ENSCCAG00000035140	-	81	82.609	ENSACIG00000014480	snrpb	54	82.787	Amphilophus_citrinellus
ENSCCAG00000035140	-	89	84.314	ENSAOCG00000006876	snrpb	53	83.465	Amphiprion_ocellaris
ENSCCAG00000035140	-	77	81.818	ENSAPEG00000008846	-	88	68.966	Amphiprion_percula
ENSCCAG00000035140	-	89	84.314	ENSAPEG00000021585	snrpb	55	83.465	Amphiprion_percula
ENSCCAG00000035140	-	89	84.314	ENSATEG00000009836	snrpb	53	83.465	Anabas_testudineus
ENSCCAG00000035140	-	77	81.818	ENSACAG00000002053	SNRPB	52	83.333	Anolis_carolinensis
ENSCCAG00000035140	-	89	86.275	ENSANAG00000036271	-	51	84.252	Aotus_nancymaae
ENSCCAG00000035140	-	89	86.275	ENSANAG00000024443	-	55	88.189	Aotus_nancymaae
ENSCCAG00000035140	-	89	86.275	ENSANAG00000020364	-	75	71.986	Aotus_nancymaae
ENSCCAG00000035140	-	89	84.314	ENSACLG00000014707	snrpb	53	83.465	Astatotilapia_calliptera
ENSCCAG00000035140	-	89	84.314	ENSAMXG00000029434	snrpb	54	82.677	Astyanax_mexicanus
ENSCCAG00000035140	-	89	86.275	ENSBTAG00000001038	SNRPB	55	88.189	Bos_taurus
ENSCCAG00000035140	-	89	66.667	ENSBTAG00000024548	-	73	64.815	Bos_taurus
ENSCCAG00000035140	-	89	84.314	ENSCJAG00000023097	-	53	85.827	Callithrix_jacchus
ENSCCAG00000035140	-	89	80.392	ENSCJAG00000041673	-	69	81.481	Callithrix_jacchus
ENSCCAG00000035140	-	89	86.275	ENSCJAG00000020971	-	55	88.189	Callithrix_jacchus
ENSCCAG00000035140	-	89	69.811	ENSCAFG00000031109	-	53	75.000	Canis_familiaris
ENSCCAG00000035140	-	89	86.275	ENSCAFG00000006693	-	55	88.189	Canis_familiaris
ENSCCAG00000035140	-	81	80.435	ENSCAFG00020013247	-	69	75.862	Canis_lupus_dingo
ENSCCAG00000035140	-	81	80.435	ENSCAFG00020020370	-	60	82.222	Canis_lupus_dingo
ENSCCAG00000035140	-	63	83.333	ENSCAFG00020016234	-	79	83.951	Canis_lupus_dingo
ENSCCAG00000035140	-	89	86.275	ENSCAFG00020016981	-	53	88.189	Canis_lupus_dingo
ENSCCAG00000035140	-	72	82.927	ENSCAFG00020003638	-	70	68.519	Canis_lupus_dingo
ENSCCAG00000035140	-	88	64.000	ENSCHIG00000024610	-	75	64.000	Capra_hircus
ENSCCAG00000035140	-	89	86.275	ENSCHIG00000025449	-	55	88.189	Capra_hircus
ENSCCAG00000035140	-	89	86.275	ENSTSYG00000014498	-	55	88.189	Carlito_syrichta
ENSCCAG00000035140	-	89	68.627	ENSTSYG00000032303	-	98	55.678	Carlito_syrichta
ENSCCAG00000035140	-	89	86.275	ENSCAPG00000012669	SNRPB	55	88.189	Cavia_aperea
ENSCCAG00000035140	-	89	86.275	ENSCPOG00000039408	SNRPB	55	88.189	Cavia_porcellus
ENSCCAG00000035140	-	89	86.275	ENSCATG00000030230	SNRPB	55	88.189	Cercocebus_atys
ENSCCAG00000035140	-	89	86.275	ENSCLAG00000012442	SNRPB	54	88.189	Chinchilla_lanigera
ENSCCAG00000035140	-	89	86.275	ENSCSAG00000010840	SNRPB	55	88.189	Chlorocebus_sabaeus
ENSCCAG00000035140	-	89	84.314	ENSCPBG00000026801	SNRPB	55	84.252	Chrysemys_picta_bellii
ENSCCAG00000035140	-	89	86.275	ENSCANG00000019461	SNRPB	62	86.275	Colobus_angolensis_palliatus
ENSCCAG00000035140	-	89	86.275	ENSCGRG00001023046	Snrpb	55	88.189	Cricetulus_griseus_chok1gshd
ENSCCAG00000035140	-	82	85.106	ENSCGRG00000010423	Snrpb	53	87.500	Cricetulus_griseus_crigri
ENSCCAG00000035140	-	89	86.275	ENSCSEG00000020328	snrpb	53	83.465	Cynoglossus_semilaevis
ENSCCAG00000035140	-	89	86.275	ENSDARG00000011125	snrpb	53	83.465	Danio_rerio
ENSCCAG00000035140	-	89	86.275	ENSDNOG00000007896	-	52	88.189	Dasypus_novemcinctus
ENSCCAG00000035140	-	89	86.275	ENSDNOG00000015545	-	53	88.189	Dasypus_novemcinctus
ENSCCAG00000035140	-	81	84.783	ENSDORG00000029558	Snrpb	53	87.705	Dipodomys_ordii
ENSCCAG00000035140	-	89	68.627	FBgn0262601	SmB	88	53.107	Drosophila_melanogaster
ENSCCAG00000035140	-	89	78.431	ENSEBUG00000007467	SNRPB	53	76.378	Eptatretus_burgeri
ENSCCAG00000035140	-	89	86.275	ENSEASG00005012991	SNRPB	55	87.402	Equus_asinus_asinus
ENSCCAG00000035140	-	89	86.275	ENSECAG00000011944	SNRPB	55	88.189	Equus_caballus
ENSCCAG00000035140	-	89	86.275	ENSEEUG00000015568	SNRPB	95	67.037	Erinaceus_europaeus
ENSCCAG00000035140	-	89	84.314	ENSELUG00000014564	snrpb	54	83.465	Esox_lucius
ENSCCAG00000035140	-	89	86.275	ENSFCAG00000034090	-	55	88.189	Felis_catus
ENSCCAG00000035140	-	86	71.429	ENSFCAG00000041049	-	60	71.429	Felis_catus
ENSCCAG00000035140	-	77	81.818	ENSFALG00000004866	SNRPB	52	83.333	Ficedula_albicollis
ENSCCAG00000035140	-	89	86.275	ENSFDAG00000009937	SNRPB	55	88.189	Fukomys_damarensis
ENSCCAG00000035140	-	72	65.854	ENSFHEG00000006534	-	78	53.623	Fundulus_heteroclitus
ENSCCAG00000035140	-	89	84.314	ENSGALG00000035421	SNRPN	53	84.252	Gallus_gallus
ENSCCAG00000035140	-	88	84.000	ENSGAFG00000019558	snrpb	56	82.677	Gambusia_affinis
ENSCCAG00000035140	-	89	84.314	ENSGACG00000003262	snrpb	53	83.465	Gasterosteus_aculeatus
ENSCCAG00000035140	-	89	84.314	ENSGAGG00000001308	SNRPB	53	84.252	Gopherus_agassizii
ENSCCAG00000035140	-	89	86.275	ENSGGOG00000016138	SNRPB	55	88.189	Gorilla_gorilla
ENSCCAG00000035140	-	89	84.314	ENSHBUG00000008369	snrpb	53	83.465	Haplochromis_burtoni
ENSCCAG00000035140	-	88	82.000	ENSHGLG00000016505	-	61	81.452	Heterocephalus_glaber_female
ENSCCAG00000035140	-	89	86.275	ENSHGLG00000016241	-	55	88.189	Heterocephalus_glaber_female
ENSCCAG00000035140	-	88	82.000	ENSHGLG00100004178	-	61	81.452	Heterocephalus_glaber_male
ENSCCAG00000035140	-	89	86.275	ENSHGLG00100012877	-	55	88.189	Heterocephalus_glaber_male
ENSCCAG00000035140	-	89	84.314	ENSHCOG00000014888	snrpb	53	83.465	Hippocampus_comes
ENSCCAG00000035140	-	89	86.275	ENSIPUG00000024569	SNRPB	53	83.465	Ictalurus_punctatus
ENSCCAG00000035140	-	81	84.783	ENSSTOG00000027821	-	56	86.992	Ictidomys_tridecemlineatus
ENSCCAG00000035140	-	89	86.275	ENSSTOG00000033664	-	53	87.402	Ictidomys_tridecemlineatus
ENSCCAG00000035140	-	89	86.275	ENSJJAG00000024170	Snrpb	55	88.189	Jaculus_jaculus
ENSCCAG00000035140	-	89	86.275	ENSKMAG00000014494	snrpb	52	84.252	Kryptolebias_marmoratus
ENSCCAG00000035140	-	89	84.314	ENSLBEG00000005678	snrpb	53	83.465	Labrus_bergylta
ENSCCAG00000035140	-	89	86.275	ENSLACG00000011459	SNRPB	53	84.252	Latimeria_chalumnae
ENSCCAG00000035140	-	89	86.275	ENSLOCG00000002687	snrpb	53	84.252	Lepisosteus_oculatus
ENSCCAG00000035140	-	89	76.471	ENSLAFG00000017588	SNRPB	54	84.252	Loxodonta_africana
ENSCCAG00000035140	-	89	86.275	ENSMFAG00000038756	SNRPB	55	88.189	Macaca_fascicularis
ENSCCAG00000035140	-	89	86.275	ENSMMUG00000010050	SNRPB	55	88.189	Macaca_mulatta
ENSCCAG00000035140	-	89	86.275	ENSMNEG00000027954	SNRPB	55	88.189	Macaca_nemestrina
ENSCCAG00000035140	-	89	86.275	ENSMLEG00000022346	SNRPB	55	88.189	Mandrillus_leucophaeus
ENSCCAG00000035140	-	89	84.314	ENSMAMG00000009294	snrpb	52	83.465	Mastacembelus_armatus
ENSCCAG00000035140	-	89	84.314	ENSMZEG00005011856	snrpb	53	83.465	Maylandia_zebra
ENSCCAG00000035140	-	89	86.275	ENSMAUG00000020656	-	65	86.275	Mesocricetus_auratus
ENSCCAG00000035140	-	89	86.275	ENSMAUG00000006516	-	78	86.275	Mesocricetus_auratus
ENSCCAG00000035140	-	89	86.275	ENSMICG00000016519	SNRPB	55	88.189	Microcebus_murinus
ENSCCAG00000035140	-	89	74.510	ENSMICG00000015983	-	58	81.102	Microcebus_murinus
ENSCCAG00000035140	-	89	86.275	ENSMOCG00000002892	-	55	87.402	Microtus_ochrogaster
ENSCCAG00000035140	-	89	78.431	ENSMOCG00000021362	-	52	72.222	Microtus_ochrogaster
ENSCCAG00000035140	-	89	84.314	ENSMMOG00000013226	snrpb	55	83.465	Mola_mola
ENSCCAG00000035140	-	89	86.275	MGP_CAROLIEiJ_G0024293	Snrpb	73	86.275	Mus_caroli
ENSCCAG00000035140	-	89	86.275	ENSMUSG00000027404	Snrpb	73	86.275	Mus_musculus
ENSCCAG00000035140	-	89	86.275	MGP_PahariEiJ_G0025738	Snrpb	73	86.275	Mus_pahari
ENSCCAG00000035140	-	89	86.275	MGP_SPRETEiJ_G0025213	Snrpb	82	77.586	Mus_spretus
ENSCCAG00000035140	-	89	86.275	ENSMPUG00000009283	SNRPB	55	88.189	Mustela_putorius_furo
ENSCCAG00000035140	-	89	86.275	ENSMLUG00000016951	SNRPB	52	85.039	Myotis_lucifugus
ENSCCAG00000035140	-	89	86.275	ENSNGAG00000012051	Snrpb	55	88.189	Nannospalax_galili
ENSCCAG00000035140	-	89	86.275	ENSNLEG00000029067	SNRPB	54	88.189	Nomascus_leucogenys
ENSCCAG00000035140	-	89	86.275	ENSMEUG00000015625	SNRPB	56	86.614	Notamacropus_eugenii
ENSCCAG00000035140	-	89	84.314	ENSODEG00000016060	-	52	82.677	Octodon_degus
ENSCCAG00000035140	-	89	86.275	ENSODEG00000004305	-	92	70.455	Octodon_degus
ENSCCAG00000035140	-	89	84.314	ENSONIG00000000248	snrpb	53	83.465	Oreochromis_niloticus
ENSCCAG00000035140	-	89	86.275	ENSOCUG00000014042	-	53	88.189	Oryctolagus_cuniculus
ENSCCAG00000035140	-	89	82.353	ENSOCUG00000022423	-	65	84.921	Oryctolagus_cuniculus
ENSCCAG00000035140	-	89	84.314	ENSOCUG00000021456	-	53	85.827	Oryctolagus_cuniculus
ENSCCAG00000035140	-	75	65.116	ENSOCUG00000026813	-	88	57.635	Oryctolagus_cuniculus
ENSCCAG00000035140	-	89	86.275	ENSOCUG00000028215	-	53	86.614	Oryctolagus_cuniculus
ENSCCAG00000035140	-	89	84.314	ENSORLG00000021862	snrpb	53	83.465	Oryzias_latipes
ENSCCAG00000035140	-	89	86.275	ENSOGAG00000016149	SNRPB	53	88.189	Otolemur_garnettii
ENSCCAG00000035140	-	89	86.275	ENSOARG00000006740	SNRPB	55	88.189	Ovis_aries
ENSCCAG00000035140	-	89	86.275	ENSPPAG00000036314	SNRPB	55	88.189	Pan_paniscus
ENSCCAG00000035140	-	89	72.549	ENSPPRG00000024804	-	73	70.588	Panthera_pardus
ENSCCAG00000035140	-	88	74.000	ENSPPRG00000018908	-	69	73.770	Panthera_pardus
ENSCCAG00000035140	-	89	86.275	ENSPPRG00000003233	-	55	88.189	Panthera_pardus
ENSCCAG00000035140	-	89	86.275	ENSPTIG00000007468	SNRPB	55	88.189	Panthera_tigris_altaica
ENSCCAG00000035140	-	89	86.275	ENSPTRG00000013176	SNRPB	55	88.189	Pan_troglodytes
ENSCCAG00000035140	-	89	86.275	ENSPANG00000020362	SNRPB	53	88.189	Papio_anubis
ENSCCAG00000035140	-	89	86.275	ENSPKIG00000002865	snrpb	53	83.465	Paramormyrops_kingsleyae
ENSCCAG00000035140	-	89	84.314	ENSPSIG00000014125	SNRPB	52	84.252	Pelodiscus_sinensis
ENSCCAG00000035140	-	82	82.979	ENSPMGG00000016349	snrpb	53	81.301	Periophthalmus_magnuspinnatus
ENSCCAG00000035140	-	89	86.275	ENSPEMG00000007948	Snrpb	55	88.189	Peromyscus_maniculatus_bairdii
ENSCCAG00000035140	-	89	80.392	ENSPMAG00000004923	SNRPB	99	84.091	Petromyzon_marinus
ENSCCAG00000035140	-	89	86.275	ENSPCIG00000004694	SNRPB	53	86.614	Phascolarctos_cinereus
ENSCCAG00000035140	-	89	84.314	ENSPFOG00000011802	snrpb	54	83.465	Poecilia_formosa
ENSCCAG00000035140	-	81	82.609	ENSPLAG00000014130	snrpb	53	82.787	Poecilia_latipinna
ENSCCAG00000035140	-	81	82.609	ENSPREG00000015515	snrpb	56	82.787	Poecilia_reticulata
ENSCCAG00000035140	-	89	86.275	ENSPPYG00000010841	SNRPB	55	88.189	Pongo_abelii
ENSCCAG00000035140	-	89	86.275	ENSPCOG00000013686	SNRPB	55	88.189	Propithecus_coquereli
ENSCCAG00000035140	-	89	86.275	ENSPVAG00000017013	SNRPB	99	64.437	Pteropus_vampyrus
ENSCCAG00000035140	-	89	84.314	ENSPNYG00000014788	snrpb	53	83.465	Pundamilia_nyererei
ENSCCAG00000035140	-	89	86.275	ENSPNAG00000016126	snrpb	53	83.465	Pygocentrus_nattereri
ENSCCAG00000035140	-	89	86.275	ENSRNOG00000006961	Snrpb	72	86.275	Rattus_norvegicus
ENSCCAG00000035140	-	89	86.275	ENSRBIG00000040505	SNRPB	55	88.189	Rhinopithecus_bieti
ENSCCAG00000035140	-	89	86.275	ENSRROG00000036094	SNRPB	55	88.189	Rhinopithecus_roxellana
ENSCCAG00000035140	-	89	86.275	ENSSBOG00000027310	SNRPB	55	88.189	Saimiri_boliviensis_boliviensis
ENSCCAG00000035140	-	89	86.275	ENSSHAG00000010394	SNRPB	53	87.402	Sarcophilus_harrisii
ENSCCAG00000035140	-	89	86.275	ENSSFOG00015002870	snrpb	54	82.677	Scleropages_formosus
ENSCCAG00000035140	-	89	84.314	ENSSMAG00000006766	snrpb	53	83.465	Scophthalmus_maximus
ENSCCAG00000035140	-	89	84.314	ENSSDUG00000018539	snrpb	53	83.465	Seriola_dumerili
ENSCCAG00000035140	-	89	84.314	ENSSLDG00000022391	snrpb	53	83.465	Seriola_lalandi_dorsalis
ENSCCAG00000035140	-	89	86.275	ENSSARG00000003084	SNRPB	54	68.504	Sorex_araneus
ENSCCAG00000035140	-	89	84.314	ENSSPUG00000015659	SNRPB	53	84.252	Sphenodon_punctatus
ENSCCAG00000035140	-	89	84.314	ENSSPAG00000021992	snrpb	53	83.465	Stegastes_partitus
ENSCCAG00000035140	-	75	81.395	ENSSSCG00000011966	-	95	57.078	Sus_scrofa
ENSCCAG00000035140	-	89	86.275	ENSSSCG00000040857	-	55	88.189	Sus_scrofa
ENSCCAG00000035140	-	89	84.314	ENSTGUG00000005684	SNRPB	53	84.252	Taeniopygia_guttata
ENSCCAG00000035140	-	89	84.314	ENSTRUG00000023094	snrpb	55	83.465	Takifugu_rubripes
ENSCCAG00000035140	-	89	84.314	ENSTNIG00000002991	snrpb	53	83.465	Tetraodon_nigroviridis
ENSCCAG00000035140	-	89	64.706	ENSUAMG00000016301	-	69	64.706	Ursus_americanus
ENSCCAG00000035140	-	89	86.275	ENSUAMG00000005984	-	61	88.189	Ursus_americanus
ENSCCAG00000035140	-	84	83.333	ENSUMAG00000002123	-	57	87.097	Ursus_maritimus
ENSCCAG00000035140	-	89	64.706	ENSUMAG00000011571	-	61	64.706	Ursus_maritimus
ENSCCAG00000035140	-	89	86.275	ENSVVUG00000025654	-	53	88.189	Vulpes_vulpes
ENSCCAG00000035140	-	89	86.275	ENSVVUG00000010086	-	52	77.586	Vulpes_vulpes
ENSCCAG00000035140	-	89	78.431	ENSVVUG00000011423	-	71	78.182	Vulpes_vulpes
ENSCCAG00000035140	-	89	86.275	ENSXETG00000027266	snrpb	54	85.039	Xenopus_tropicalis
ENSCCAG00000035140	-	68	74.359	ENSXCOG00000017217	snrpb	89	82.667	Xiphophorus_couchianus
ENSCCAG00000035140	-	81	82.609	ENSXMAG00000028767	snrpb	52	82.787	Xiphophorus_maculatus