EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000035256 (Gene tree)
Gene ID: 108310228
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 18100 bases
Position: chrKV389528.1:2419205-2437304
Accession: 108310228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000034907	DUF382	PF04037.13	1.6e-59	1	1
ENSCCAP00000034884	DUF382	PF04037.13	1.7e-59	1	1
ENSCCAP00000034904	DUF382	PF04037.13	1.7e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000052684	SF3B2-203	2640	-	ENSCCAP00000034907	879 (aa)	-	A0A2K5S3E2
ENSCCAT00000052681	SF3B2-202	2733	-	ENSCCAP00000034904	910 (aa)	-	A0A2K5S3D3
ENSCCAT00000052661	SF3B2-201	3289	XM_017537095	ENSCCAP00000034884	896 (aa)	XP_017392584	A0A2K5S3B3

Gene Model

Click here to download ENSCCAG00000035256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035256	SF3B2	100	99.330	ENSG00000087365	SF3B2	100	99.330	Homo_sapiens
ENSCCAG00000035256	SF3B2	95	70.000	ENSAPOG00000001974	sf3b2	82	74.528	Acanthochromis_polyacanthus
ENSCCAG00000035256	SF3B2	100	98.002	ENSAMEG00000017206	SF3B2	100	98.002	Ailuropoda_melanoleuca
ENSCCAG00000035256	SF3B2	97	67.771	ENSACIG00000000624	sf3b2	87	74.440	Amphilophus_citrinellus
ENSCCAG00000035256	SF3B2	97	70.555	ENSAOCG00000009207	sf3b2	86	75.065	Amphiprion_ocellaris
ENSCCAG00000035256	SF3B2	97	70.146	ENSAPEG00000002762	sf3b2	87	73.205	Amphiprion_percula
ENSCCAG00000035256	SF3B2	100	65.680	ENSACAG00000008615	SF3B2	100	66.188	Anolis_carolinensis
ENSCCAG00000035256	SF3B2	100	99.777	ENSANAG00000029120	SF3B2	100	99.777	Aotus_nancymaae
ENSCCAG00000035256	SF3B2	86	73.161	ENSACLG00000014771	sf3b2	87	74.838	Astatotilapia_calliptera
ENSCCAG00000035256	SF3B2	84	71.279	ENSAMXG00000007929	sf3b2	86	77.237	Astyanax_mexicanus
ENSCCAG00000035256	SF3B2	100	97.111	ENSBTAG00000002778	SF3B2	100	97.111	Bos_taurus
ENSCCAG00000035256	SF3B2	60	50.532	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSCCAG00000035256	SF3B2	100	100.000	ENSCJAG00000001656	SF3B2	100	100.000	Callithrix_jacchus
ENSCCAG00000035256	SF3B2	100	98.109	ENSCAFG00000013033	SF3B2	100	98.109	Canis_familiaris
ENSCCAG00000035256	SF3B2	100	98.109	ENSCAFG00020015382	SF3B2	100	98.109	Canis_lupus_dingo
ENSCCAG00000035256	SF3B2	100	97.219	ENSCHIG00000011211	SF3B2	100	97.219	Capra_hircus
ENSCCAG00000035256	SF3B2	100	98.884	ENSTSYG00000000959	SF3B2	100	98.884	Carlito_syrichta
ENSCCAG00000035256	SF3B2	61	98.947	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSCCAG00000035256	SF3B2	91	97.365	ENSCPOG00000008294	SF3B2	100	97.365	Cavia_porcellus
ENSCCAG00000035256	SF3B2	100	99.442	ENSCATG00000042240	SF3B2	100	99.442	Cercocebus_atys
ENSCCAG00000035256	SF3B2	100	98.294	ENSCLAG00000016852	SF3B2	100	98.294	Chinchilla_lanigera
ENSCCAG00000035256	SF3B2	100	99.442	ENSCSAG00000008121	SF3B2	100	99.442	Chlorocebus_sabaeus
ENSCCAG00000035256	SF3B2	89	99.485	ENSCHOG00000001476	SF3B2	90	91.237	Choloepus_hoffmanni
ENSCCAG00000035256	SF3B2	85	81.641	ENSCPBG00000022465	SF3B2	87	88.401	Chrysemys_picta_bellii
ENSCCAG00000035256	SF3B2	73	60.429	ENSCING00000005665	-	99	60.063	Ciona_intestinalis
ENSCCAG00000035256	SF3B2	71	60.563	ENSCSAVG00000002029	-	99	59.779	Ciona_savignyi
ENSCCAG00000035256	SF3B2	100	99.442	ENSCANG00000039680	SF3B2	100	99.442	Colobus_angolensis_palliatus
ENSCCAG00000035256	SF3B2	100	98.180	ENSCGRG00001015741	Sf3b2	100	98.180	Cricetulus_griseus_chok1gshd
ENSCCAG00000035256	SF3B2	100	98.180	ENSCGRG00000018110	Sf3b2	100	98.180	Cricetulus_griseus_crigri
ENSCCAG00000035256	SF3B2	75	75.150	ENSCSEG00000000230	sf3b2	78	77.129	Cynoglossus_semilaevis
ENSCCAG00000035256	SF3B2	97	68.990	ENSCVAG00000003357	sf3b2	85	74.934	Cyprinodon_variegatus
ENSCCAG00000035256	SF3B2	86	73.582	ENSDARG00000018049	sf3b2	93	74.211	Danio_rerio
ENSCCAG00000035256	SF3B2	100	96.107	ENSDNOG00000009484	SF3B2	100	96.996	Dasypus_novemcinctus
ENSCCAG00000035256	SF3B2	100	97.614	ENSDORG00000002495	Sf3b2	100	97.614	Dipodomys_ordii
ENSCCAG00000035256	SF3B2	85	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
ENSCCAG00000035256	SF3B2	98	58.900	ENSEBUG00000013703	sf3b2	99	60.065	Eptatretus_burgeri
ENSCCAG00000035256	SF3B2	100	98.000	ENSEASG00005004508	SF3B2	100	98.000	Equus_asinus_asinus
ENSCCAG00000035256	SF3B2	100	98.000	ENSECAG00000024461	SF3B2	100	98.000	Equus_caballus
ENSCCAG00000035256	SF3B2	62	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSCCAG00000035256	SF3B2	97	67.177	ENSELUG00000005586	sf3b2	86	72.070	Esox_lucius
ENSCCAG00000035256	SF3B2	100	98.220	ENSFCAG00000013289	SF3B2	100	98.220	Felis_catus
ENSCCAG00000035256	SF3B2	80	69.873	ENSFALG00000014653	SF3B2	98	69.014	Ficedula_albicollis
ENSCCAG00000035256	SF3B2	100	97.780	ENSFDAG00000019806	SF3B2	100	97.780	Fukomys_damarensis
ENSCCAG00000035256	SF3B2	97	65.006	ENSFHEG00000020968	sf3b2	87	73.901	Fundulus_heteroclitus
ENSCCAG00000035256	SF3B2	73	78.049	ENSGMOG00000012131	sf3b2	96	80.975	Gadus_morhua
ENSCCAG00000035256	SF3B2	97	68.679	ENSGAFG00000001675	sf3b2	86	73.386	Gambusia_affinis
ENSCCAG00000035256	SF3B2	73	79.231	ENSGACG00000019012	sf3b2	96	80.317	Gasterosteus_aculeatus
ENSCCAG00000035256	SF3B2	100	78.619	ENSGAGG00000023916	SF3B2	86	86.078	Gopherus_agassizii
ENSCCAG00000035256	SF3B2	100	99.330	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
ENSCCAG00000035256	SF3B2	86	73.290	ENSHBUG00000017349	sf3b2	87	74.838	Haplochromis_burtoni
ENSCCAG00000035256	SF3B2	100	98.180	ENSHGLG00000010807	SF3B2	100	98.180	Heterocephalus_glaber_female
ENSCCAG00000035256	SF3B2	100	98.214	ENSHGLG00100006361	SF3B2	100	98.214	Heterocephalus_glaber_male
ENSCCAG00000035256	SF3B2	97	65.909	ENSHCOG00000016203	sf3b2	87	71.056	Hippocampus_comes
ENSCCAG00000035256	SF3B2	97	66.100	ENSIPUG00000009383	sf3b2	85	71.748	Ictalurus_punctatus
ENSCCAG00000035256	SF3B2	100	98.661	ENSSTOG00000028892	SF3B2	100	98.661	Ictidomys_tridecemlineatus
ENSCCAG00000035256	SF3B2	100	98.186	ENSJJAG00000018193	Sf3b2	100	98.186	Jaculus_jaculus
ENSCCAG00000035256	SF3B2	60	87.970	ENSKMAG00000020181	sf3b2	84	74.211	Kryptolebias_marmoratus
ENSCCAG00000035256	SF3B2	97	69.438	ENSLBEG00000027739	sf3b2	88	79.463	Labrus_bergylta
ENSCCAG00000035256	SF3B2	79	81.250	ENSLACG00000010429	SF3B2	93	74.936	Latimeria_chalumnae
ENSCCAG00000035256	SF3B2	100	97.619	ENSLAFG00000002128	SF3B2	100	97.619	Loxodonta_africana
ENSCCAG00000035256	SF3B2	100	99.331	ENSMFAG00000003064	SF3B2	100	99.331	Macaca_fascicularis
ENSCCAG00000035256	SF3B2	100	95.089	ENSMMUG00000011743	SF3B2	100	95.089	Macaca_mulatta
ENSCCAG00000035256	SF3B2	100	99.330	ENSMNEG00000034437	SF3B2	100	99.330	Macaca_nemestrina
ENSCCAG00000035256	SF3B2	100	99.219	ENSMLEG00000029373	SF3B2	100	99.219	Mandrillus_leucophaeus
ENSCCAG00000035256	SF3B2	84	74.871	ENSMAMG00000014103	sf3b2	86	75.000	Mastacembelus_armatus
ENSCCAG00000035256	SF3B2	86	73.161	ENSMZEG00005020789	sf3b2	86	74.838	Maylandia_zebra
ENSCCAG00000035256	SF3B2	66	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSCCAG00000035256	SF3B2	100	94.766	ENSMICG00000016942	-	100	93.076	Microcebus_murinus
ENSCCAG00000035256	SF3B2	100	98.549	ENSMICG00000008565	-	100	98.549	Microcebus_murinus
ENSCCAG00000035256	SF3B2	100	98.066	ENSMOCG00000003136	Sf3b2	100	98.066	Microtus_ochrogaster
ENSCCAG00000035256	SF3B2	97	67.043	ENSMMOG00000012928	sf3b2	86	72.157	Mola_mola
ENSCCAG00000035256	SF3B2	72	88.346	ENSMODG00000025020	-	99	87.402	Monodelphis_domestica
ENSCCAG00000035256	SF3B2	85	91.391	ENSMODG00000008490	-	92	93.236	Monodelphis_domestica
ENSCCAG00000035256	SF3B2	86	70.795	ENSMALG00000015137	sf3b2	84	73.297	Monopterus_albus
ENSCCAG00000035256	SF3B2	100	97.042	MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.042	Mus_caroli
ENSCCAG00000035256	SF3B2	100	97.952	ENSMUSG00000024853	Sf3b2	100	97.952	Mus_musculus
ENSCCAG00000035256	SF3B2	100	97.952	MGP_PahariEiJ_G0014036	Sf3b2	100	97.952	Mus_pahari
ENSCCAG00000035256	SF3B2	100	97.838	MGP_SPRETEiJ_G0023453	Sf3b2	100	97.838	Mus_spretus
ENSCCAG00000035256	SF3B2	100	97.998	ENSMPUG00000011349	SF3B2	100	97.998	Mustela_putorius_furo
ENSCCAG00000035256	SF3B2	100	96.889	ENSMLUG00000011136	SF3B2	100	96.889	Myotis_lucifugus
ENSCCAG00000035256	SF3B2	100	98.180	ENSNGAG00000012103	Sf3b2	100	98.180	Nannospalax_galili
ENSCCAG00000035256	SF3B2	100	94.033	ENSNLEG00000006007	SF3B2	100	94.033	Nomascus_leucogenys
ENSCCAG00000035256	SF3B2	77	93.466	ENSMEUG00000000019	SF3B2	80	93.466	Notamacropus_eugenii
ENSCCAG00000035256	SF3B2	100	94.425	ENSODEG00000017764	SF3B2	100	94.425	Octodon_degus
ENSCCAG00000035256	SF3B2	97	67.753	ENSONIG00000013068	sf3b2	91	76.269	Oreochromis_niloticus
ENSCCAG00000035256	SF3B2	87	81.643	ENSOANG00000012482	SF3B2	97	81.867	Ornithorhynchus_anatinus
ENSCCAG00000035256	SF3B2	62	65.619	ENSOCUG00000024154	-	100	65.804	Oryctolagus_cuniculus
ENSCCAG00000035256	SF3B2	100	92.857	ENSOCUG00000015722	-	100	92.857	Oryctolagus_cuniculus
ENSCCAG00000035256	SF3B2	97	67.568	ENSORLG00000008235	sf3b2	85	74.607	Oryzias_latipes
ENSCCAG00000035256	SF3B2	97	67.568	ENSORLG00020005357	sf3b2	88	74.607	Oryzias_latipes_hni
ENSCCAG00000035256	SF3B2	97	67.680	ENSORLG00015022454	sf3b2	82	78.323	Oryzias_latipes_hsok
ENSCCAG00000035256	SF3B2	97	66.102	ENSOMEG00000017480	sf3b2	88	73.822	Oryzias_melastigma
ENSCCAG00000035256	SF3B2	100	92.522	ENSOGAG00000005799	SF3B2	100	93.080	Otolemur_garnettii
ENSCCAG00000035256	SF3B2	100	93.672	ENSOARG00000002125	SF3B2	100	97.832	Ovis_aries
ENSCCAG00000035256	SF3B2	100	99.330	ENSPPAG00000007359	SF3B2	100	99.330	Pan_paniscus
ENSCCAG00000035256	SF3B2	100	98.220	ENSPPRG00000013334	SF3B2	100	98.220	Panthera_pardus
ENSCCAG00000035256	SF3B2	100	98.109	ENSPTIG00000015022	SF3B2	100	98.109	Panthera_tigris_altaica
ENSCCAG00000035256	SF3B2	100	99.330	ENSPTRG00000003912	SF3B2	100	99.330	Pan_troglodytes
ENSCCAG00000035256	SF3B2	100	99.442	ENSPANG00000008593	SF3B2	100	99.442	Papio_anubis
ENSCCAG00000035256	SF3B2	97	67.814	ENSPKIG00000016576	sf3b2	86	81.517	Paramormyrops_kingsleyae
ENSCCAG00000035256	SF3B2	93	80.714	ENSPSIG00000003158	SF3B2	100	88.493	Pelodiscus_sinensis
ENSCCAG00000035256	SF3B2	84	67.937	ENSPMGG00000000819	sf3b2	86	67.759	Periophthalmus_magnuspinnatus
ENSCCAG00000035256	SF3B2	100	98.294	ENSPEMG00000015437	Sf3b2	100	98.294	Peromyscus_maniculatus_bairdii
ENSCCAG00000035256	SF3B2	93	83.681	ENSPEMG00000015451	-	100	83.701	Peromyscus_maniculatus_bairdii
ENSCCAG00000035256	SF3B2	95	85.134	ENSPCIG00000008381	SF3B2	100	88.333	Phascolarctos_cinereus
ENSCCAG00000035256	SF3B2	97	68.950	ENSPFOG00000002552	sf3b2	86	74.342	Poecilia_formosa
ENSCCAG00000035256	SF3B2	97	68.950	ENSPLAG00000001471	sf3b2	86	74.474	Poecilia_latipinna
ENSCCAG00000035256	SF3B2	97	67.694	ENSPMEG00000013180	sf3b2	86	74.308	Poecilia_mexicana
ENSCCAG00000035256	SF3B2	84	72.523	ENSPREG00000002665	sf3b2	86	74.113	Poecilia_reticulata
ENSCCAG00000035256	SF3B2	75	97.619	ENSPPYG00000003034	-	99	97.619	Pongo_abelii
ENSCCAG00000035256	SF3B2	100	97.330	ENSPCAG00000005129	SF3B2	100	97.330	Procavia_capensis
ENSCCAG00000035256	SF3B2	100	98.884	ENSPCOG00000025375	SF3B2	100	98.884	Propithecus_coquereli
ENSCCAG00000035256	SF3B2	60	99.561	ENSPVAG00000005466	-	88	99.561	Pteropus_vampyrus
ENSCCAG00000035256	SF3B2	56	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSCCAG00000035256	SF3B2	81	73.546	ENSPNYG00000023594	sf3b2	92	73.481	Pundamilia_nyererei
ENSCCAG00000035256	SF3B2	97	67.191	ENSPNAG00000001891	sf3b2	86	73.214	Pygocentrus_nattereri
ENSCCAG00000035256	SF3B2	100	97.838	ENSRNOG00000020412	Sf3b2	100	97.838	Rattus_norvegicus
ENSCCAG00000035256	SF3B2	100	99.330	ENSRBIG00000034065	SF3B2	100	99.330	Rhinopithecus_bieti
ENSCCAG00000035256	SF3B2	100	99.330	ENSRROG00000034496	SF3B2	100	99.330	Rhinopithecus_roxellana
ENSCCAG00000035256	SF3B2	100	96.813	ENSSBOG00000026337	SF3B2	100	96.813	Saimiri_boliviensis_boliviensis
ENSCCAG00000035256	SF3B2	85	86.031	ENSSHAG00000010933	-	84	86.684	Sarcophilus_harrisii
ENSCCAG00000035256	SF3B2	96	69.803	ENSSHAG00000018043	-	100	69.884	Sarcophilus_harrisii
ENSCCAG00000035256	SF3B2	97	68.071	ENSSFOG00015021125	sf3b2	86	74.449	Scleropages_formosus
ENSCCAG00000035256	SF3B2	60	87.666	ENSSMAG00000004079	sf3b2	88	75.065	Scophthalmus_maximus
ENSCCAG00000035256	SF3B2	60	88.425	ENSSDUG00000008499	sf3b2	85	71.484	Seriola_dumerili
ENSCCAG00000035256	SF3B2	60	88.425	ENSSLDG00000006838	sf3b2	86	75.163	Seriola_lalandi_dorsalis
ENSCCAG00000035256	SF3B2	54	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
ENSCCAG00000035256	SF3B2	100	80.177	ENSSPUG00000009198	SF3B2	85	84.554	Sphenodon_punctatus
ENSCCAG00000035256	SF3B2	97	68.293	ENSSPAG00000004406	sf3b2	86	75.158	Stegastes_partitus
ENSCCAG00000035256	SF3B2	100	97.219	ENSSSCG00000012957	SF3B2	100	97.219	Sus_scrofa
ENSCCAG00000035256	SF3B2	97	56.073	ENSTRUG00000007611	sf3b2	88	71.763	Takifugu_rubripes
ENSCCAG00000035256	SF3B2	91	67.044	ENSTNIG00000007441	sf3b2	89	70.990	Tetraodon_nigroviridis
ENSCCAG00000035256	SF3B2	91	93.103	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSCCAG00000035256	SF3B2	100	97.664	ENSTTRG00000014339	SF3B2	100	97.664	Tursiops_truncatus
ENSCCAG00000035256	SF3B2	100	96.222	ENSUAMG00000020754	SF3B2	99	97.561	Ursus_americanus
ENSCCAG00000035256	SF3B2	100	98.220	ENSUMAG00000010994	SF3B2	100	98.220	Ursus_maritimus
ENSCCAG00000035256	SF3B2	68	99.153	ENSVPAG00000008695	SF3B2	63	99.153	Vicugna_pacos
ENSCCAG00000035256	SF3B2	100	97.998	ENSVVUG00000027029	SF3B2	100	97.998	Vulpes_vulpes
ENSCCAG00000035256	SF3B2	87	71.907	ENSXETG00000008422	sf3b2	87	78.540	Xenopus_tropicalis
ENSCCAG00000035256	SF3B2	72	78.571	ENSXCOG00000008943	sf3b2	84	78.095	Xiphophorus_couchianus
ENSCCAG00000035256	SF3B2	60	87.736	ENSXMAG00000008467	sf3b2	86	72.608	Xiphophorus_maculatus