EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000035316 (Gene tree)
Gene ID: 108315115
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 56880 bases
Position: chrKV389595.1:2242285-2299164
Accession: 108315115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000035225	ResIII	PF04851.15	9e-08	1	1
ENSCCAP00000035212	ResIII	PF04851.15	1.1e-07	1	1
ENSCCAP00000035200	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000053002	SBNO1-203	3672	-	ENSCCAP00000035225	1223 (aa)	-	A0A2K5S4C4
ENSCCAT00000052977	SBNO1-201	4041	XM_017544245	ENSCCAP00000035200	1346 (aa)	XP_017399734	A0A2K5S499
ENSCCAT00000052988	SBNO1-202	3933	-	ENSCCAP00000035212	1310 (aa)	-	A0A2K5S496

Gene Model

Click here to download ENSCCAG00000035316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000035316	SBNO1	70	68.707	ENSCCAG00000037518	SBNO2	73	68.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035316	SBNO1	100	94.548	ENSG00000139697	SBNO1	100	94.548	Homo_sapiens
ENSCCAG00000035316	SBNO1	83	80.451	ENSAPOG00000003196	sbno1	98	75.838	Acanthochromis_polyacanthus
ENSCCAG00000035316	SBNO1	100	93.414	ENSAMEG00000015151	SBNO1	100	93.414	Ailuropoda_melanoleuca
ENSCCAG00000035316	SBNO1	99	73.020	ENSACIG00000008088	sbno1	99	71.625	Amphilophus_citrinellus
ENSCCAG00000035316	SBNO1	99	71.250	ENSAOCG00000014859	sbno1	99	70.877	Amphiprion_ocellaris
ENSCCAG00000035316	SBNO1	99	71.250	ENSAPEG00000006069	sbno1	99	70.877	Amphiprion_percula
ENSCCAG00000035316	SBNO1	99	73.418	ENSATEG00000006667	sbno1	99	71.779	Anabas_testudineus
ENSCCAG00000035316	SBNO1	100	87.446	ENSAPLG00000015674	SBNO1	100	87.455	Anas_platyrhynchos
ENSCCAG00000035316	SBNO1	100	85.101	ENSACAG00000015441	SBNO1	88	84.996	Anolis_carolinensis
ENSCCAG00000035316	SBNO1	100	95.194	ENSANAG00000029958	-	100	95.194	Aotus_nancymaae
ENSCCAG00000035316	SBNO1	99	71.512	ENSACLG00000024913	sbno1	99	71.742	Astatotilapia_calliptera
ENSCCAG00000035316	SBNO1	99	75.719	ENSAMXG00000019473	sbno1	99	75.818	Astyanax_mexicanus
ENSCCAG00000035316	SBNO1	99	93.611	ENSBTAG00000020505	SBNO1	99	93.611	Bos_taurus
ENSCCAG00000035316	SBNO1	100	95.194	ENSCJAG00000016599	SBNO1	99	99.057	Callithrix_jacchus
ENSCCAG00000035316	SBNO1	100	93.625	ENSCAFG00000007503	SBNO1	100	93.625	Canis_familiaris
ENSCCAG00000035316	SBNO1	99	94.694	ENSCAFG00020015363	SBNO1	99	95.095	Canis_lupus_dingo
ENSCCAG00000035316	SBNO1	99	93.396	ENSCHIG00000008382	SBNO1	99	95.095	Capra_hircus
ENSCCAG00000035316	SBNO1	99	95.205	ENSTSYG00000012749	SBNO1	100	93.962	Carlito_syrichta
ENSCCAG00000035316	SBNO1	97	92.447	ENSCAPG00000000384	SBNO1	99	94.638	Cavia_aperea
ENSCCAG00000035316	SBNO1	100	92.919	ENSCPOG00000008109	SBNO1	100	94.005	Cavia_porcellus
ENSCCAG00000035316	SBNO1	97	94.707	ENSCATG00000008239	SBNO1	99	93.802	Cercocebus_atys
ENSCCAG00000035316	SBNO1	100	92.919	ENSCLAG00000008995	SBNO1	100	94.005	Chinchilla_lanigera
ENSCCAG00000035316	SBNO1	84	95.880	ENSCSAG00000002064	SBNO1	100	94.133	Chlorocebus_sabaeus
ENSCCAG00000035316	SBNO1	94	97.902	ENSCHOG00000008814	SBNO1	91	94.070	Choloepus_hoffmanni
ENSCCAG00000035316	SBNO1	100	88.767	ENSCPBG00000025968	SBNO1	99	87.670	Chrysemys_picta_bellii
ENSCCAG00000035316	SBNO1	100	89.040	ENSCANG00000042688	-	100	88.968	Colobus_angolensis_palliatus
ENSCCAG00000035316	SBNO1	100	92.611	ENSCGRG00001017470	Sbno1	99	94.134	Cricetulus_griseus_chok1gshd
ENSCCAG00000035316	SBNO1	100	92.611	ENSCGRG00000004756	Sbno1	99	94.134	Cricetulus_griseus_crigri
ENSCCAG00000035316	SBNO1	99	71.841	ENSCSEG00000011919	sbno1	99	70.965	Cynoglossus_semilaevis
ENSCCAG00000035316	SBNO1	99	72.043	ENSCVAG00000007038	sbno1	99	71.680	Cyprinodon_variegatus
ENSCCAG00000035316	SBNO1	99	75.226	ENSDARG00000099080	sbno1	99	75.375	Danio_rerio
ENSCCAG00000035316	SBNO1	100	96.857	ENSDNOG00000017147	SBNO1	96	96.857	Dasypus_novemcinctus
ENSCCAG00000035316	SBNO1	100	86.501	ENSDORG00000015261	Sbno1	95	86.501	Dipodomys_ordii
ENSCCAG00000035316	SBNO1	96	100.000	ENSETEG00000005620	SBNO1	88	99.291	Echinops_telfairi
ENSCCAG00000035316	SBNO1	70	80.851	ENSEBUG00000013823	sbno1	80	80.851	Eptatretus_burgeri
ENSCCAG00000035316	SBNO1	56	96.199	ENSEASG00005012595	-	92	98.368	Equus_asinus_asinus
ENSCCAG00000035316	SBNO1	100	93.902	ENSECAG00000006127	SBNO1	100	93.902	Equus_caballus
ENSCCAG00000035316	SBNO1	82	98.352	ENSEEUG00000003793	SBNO1	83	98.352	Erinaceus_europaeus
ENSCCAG00000035316	SBNO1	99	75.540	ENSELUG00000002886	sbno1	99	73.725	Esox_lucius
ENSCCAG00000035316	SBNO1	99	93.970	ENSFCAG00000015331	SBNO1	99	93.970	Felis_catus
ENSCCAG00000035316	SBNO1	100	87.590	ENSFALG00000009273	SBNO1	100	87.670	Ficedula_albicollis
ENSCCAG00000035316	SBNO1	99	90.883	ENSFDAG00000014232	SBNO1	99	94.005	Fukomys_damarensis
ENSCCAG00000035316	SBNO1	99	72.788	ENSFHEG00000007360	sbno1	99	71.681	Fundulus_heteroclitus
ENSCCAG00000035316	SBNO1	96	74.891	ENSGMOG00000018229	sbno1	100	74.071	Gadus_morhua
ENSCCAG00000035316	SBNO1	88	87.024	ENSGALG00000003392	SBNO1	99	87.024	Gallus_gallus
ENSCCAG00000035316	SBNO1	99	73.514	ENSGAFG00000003960	sbno1	99	72.615	Gambusia_affinis
ENSCCAG00000035316	SBNO1	96	75.977	ENSGACG00000015633	sbno1	99	73.913	Gasterosteus_aculeatus
ENSCCAG00000035316	SBNO1	100	86.882	ENSGAGG00000001065	SBNO1	100	86.810	Gopherus_agassizii
ENSCCAG00000035316	SBNO1	100	94.405	ENSGGOG00000015000	SBNO1	99	95.634	Gorilla_gorilla
ENSCCAG00000035316	SBNO1	99	65.937	ENSHBUG00000011910	sbno1	99	66.182	Haplochromis_burtoni
ENSCCAG00000035316	SBNO1	100	92.611	ENSHGLG00000014165	-	100	92.611	Heterocephalus_glaber_female
ENSCCAG00000035316	SBNO1	96	71.590	ENSHCOG00000003246	sbno1	95	72.530	Hippocampus_comes
ENSCCAG00000035316	SBNO1	99	74.686	ENSIPUG00000015830	Sbno1	98	74.200	Ictalurus_punctatus
ENSCCAG00000035316	SBNO1	100	93.615	ENSSTOG00000023221	SBNO1	99	94.952	Ictidomys_tridecemlineatus
ENSCCAG00000035316	SBNO1	100	93.042	ENSJJAG00000001741	Sbno1	99	94.687	Jaculus_jaculus
ENSCCAG00000035316	SBNO1	99	72.909	ENSKMAG00000009696	sbno1	99	72.169	Kryptolebias_marmoratus
ENSCCAG00000035316	SBNO1	99	74.503	ENSLBEG00000007623	sbno1	99	71.628	Labrus_bergylta
ENSCCAG00000035316	SBNO1	96	82.143	ENSLACG00000017227	SBNO1	99	78.479	Latimeria_chalumnae
ENSCCAG00000035316	SBNO1	99	77.344	ENSLOCG00000005725	sbno1	97	77.415	Lepisosteus_oculatus
ENSCCAG00000035316	SBNO1	100	92.468	ENSLAFG00000002135	SBNO1	100	92.468	Loxodonta_africana
ENSCCAG00000035316	SBNO1	100	95.504	ENSMFAG00000031429	SBNO1	100	94.405	Macaca_fascicularis
ENSCCAG00000035316	SBNO1	100	95.504	ENSMMUG00000011496	SBNO1	100	94.405	Macaca_mulatta
ENSCCAG00000035316	SBNO1	100	92.683	ENSMLEG00000033260	SBNO1	100	92.683	Mandrillus_leucophaeus
ENSCCAG00000035316	SBNO1	99	73.646	ENSMAMG00000005473	sbno1	99	71.479	Mastacembelus_armatus
ENSCCAG00000035316	SBNO1	100	87.518	ENSMGAG00000003274	SBNO1	100	87.599	Meleagris_gallopavo
ENSCCAG00000035316	SBNO1	54	97.428	ENSMAUG00000004834	-	100	96.983	Mesocricetus_auratus
ENSCCAG00000035316	SBNO1	99	95.095	ENSMICG00000006573	-	99	97.490	Microcebus_murinus
ENSCCAG00000035316	SBNO1	100	92.368	ENSMOCG00000009390	Sbno1	99	93.861	Microtus_ochrogaster
ENSCCAG00000035316	SBNO1	99	72.727	ENSMMOG00000008691	sbno1	99	69.382	Mola_mola
ENSCCAG00000035316	SBNO1	99	90.668	ENSMODG00000012470	SBNO1	98	90.739	Monodelphis_domestica
ENSCCAG00000035316	SBNO1	99	71.869	ENSMALG00000001056	sbno1	99	71.119	Monopterus_albus
ENSCCAG00000035316	SBNO1	99	92.606	MGP_CAROLIEiJ_G0027749	Sbno1	100	97.285	Mus_caroli
ENSCCAG00000035316	SBNO1	99	92.678	ENSMUSG00000038095	Sbno1	100	97.285	Mus_musculus
ENSCCAG00000035316	SBNO1	99	92.965	MGP_PahariEiJ_G0024329	Sbno1	100	96.983	Mus_pahari
ENSCCAG00000035316	SBNO1	99	92.462	MGP_SPRETEiJ_G0028747	Sbno1	100	97.285	Mus_spretus
ENSCCAG00000035316	SBNO1	100	93.831	ENSMPUG00000001658	SBNO1	100	93.831	Mustela_putorius_furo
ENSCCAG00000035316	SBNO1	100	93.257	ENSMLUG00000017159	SBNO1	100	93.257	Myotis_lucifugus
ENSCCAG00000035316	SBNO1	100	93.472	ENSNGAG00000012620	Sbno1	100	93.472	Nannospalax_galili
ENSCCAG00000035316	SBNO1	99	71.753	ENSNBRG00000019189	sbno1	99	71.836	Neolamprologus_brichardi
ENSCCAG00000035316	SBNO1	99	95.504	ENSNLEG00000001502	SBNO1	99	95.368	Nomascus_leucogenys
ENSCCAG00000035316	SBNO1	62	96.774	ENSMEUG00000008768	-	93	90.506	Notamacropus_eugenii
ENSCCAG00000035316	SBNO1	100	89.327	ENSOPRG00000011054	SBNO1	100	89.756	Ochotona_princeps
ENSCCAG00000035316	SBNO1	100	92.998	ENSODEG00000009997	SBNO1	100	92.998	Octodon_degus
ENSCCAG00000035316	SBNO1	99	72.022	ENSONIG00000015348	sbno1	99	71.529	Oreochromis_niloticus
ENSCCAG00000035316	SBNO1	98	91.691	ENSOCUG00000002441	SBNO1	95	91.691	Oryctolagus_cuniculus
ENSCCAG00000035316	SBNO1	99	71.429	ENSORLG00000001593	sbno1	99	70.836	Oryzias_latipes
ENSCCAG00000035316	SBNO1	99	71.429	ENSORLG00020015216	sbno1	99	70.886	Oryzias_latipes_hni
ENSCCAG00000035316	SBNO1	99	71.609	ENSORLG00015002726	sbno1	99	70.886	Oryzias_latipes_hsok
ENSCCAG00000035316	SBNO1	99	71.739	ENSOMEG00000019313	sbno1	99	71.500	Oryzias_melastigma
ENSCCAG00000035316	SBNO1	54	94.554	ENSOGAG00000010781	-	100	94.428	Otolemur_garnettii
ENSCCAG00000035316	SBNO1	99	93.190	ENSOARG00000004404	SBNO1	99	93.190	Ovis_aries
ENSCCAG00000035316	SBNO1	99	95.504	ENSPPAG00000024635	SBNO1	99	95.640	Pan_paniscus
ENSCCAG00000035316	SBNO1	99	93.970	ENSPPRG00000022092	SBNO1	99	93.970	Panthera_pardus
ENSCCAG00000035316	SBNO1	100	93.687	ENSPTIG00000017803	SBNO1	100	93.687	Panthera_tigris_altaica
ENSCCAG00000035316	SBNO1	99	95.504	ENSPTRG00000005597	SBNO1	99	95.640	Pan_troglodytes
ENSCCAG00000035316	SBNO1	99	95.504	ENSPANG00000011640	SBNO1	100	94.405	Papio_anubis
ENSCCAG00000035316	SBNO1	99	76.000	ENSPKIG00000001441	sbno1	99	76.303	Paramormyrops_kingsleyae
ENSCCAG00000035316	SBNO1	99	88.493	ENSPSIG00000009572	-	100	87.270	Pelodiscus_sinensis
ENSCCAG00000035316	SBNO1	92	82.997	ENSPSIG00000009256	-	100	82.997	Pelodiscus_sinensis
ENSCCAG00000035316	SBNO1	100	92.468	ENSPEMG00000016087	Sbno1	99	93.724	Peromyscus_maniculatus_bairdii
ENSCCAG00000035316	SBNO1	99	91.518	ENSPCIG00000010985	SBNO1	99	90.213	Phascolarctos_cinereus
ENSCCAG00000035316	SBNO1	99	72.401	ENSPFOG00000005069	sbno1	99	72.171	Poecilia_formosa
ENSCCAG00000035316	SBNO1	99	72.401	ENSPLAG00000015015	sbno1	99	72.183	Poecilia_latipinna
ENSCCAG00000035316	SBNO1	99	72.401	ENSPMEG00000021212	sbno1	99	72.121	Poecilia_mexicana
ENSCCAG00000035316	SBNO1	91	82.707	ENSPREG00000017746	sbno1	99	71.640	Poecilia_reticulata
ENSCCAG00000035316	SBNO1	100	94.118	ENSPPYG00000005084	SBNO1	100	94.118	Pongo_abelii
ENSCCAG00000035316	SBNO1	89	100.000	ENSPCAG00000008634	SBNO1	84	100.000	Procavia_capensis
ENSCCAG00000035316	SBNO1	100	93.615	ENSPCOG00000024277	SBNO1	99	95.129	Propithecus_coquereli
ENSCCAG00000035316	SBNO1	87	93.503	ENSPVAG00000015304	SBNO1	87	93.503	Pteropus_vampyrus
ENSCCAG00000035316	SBNO1	99	72.022	ENSPNYG00000004291	sbno1	99	71.629	Pundamilia_nyererei
ENSCCAG00000035316	SBNO1	99	76.302	ENSPNAG00000015622	sbno1	99	74.699	Pygocentrus_nattereri
ENSCCAG00000035316	SBNO1	99	92.749	ENSRNOG00000001064	Sbno1	99	93.861	Rattus_norvegicus
ENSCCAG00000035316	SBNO1	99	95.640	ENSRROG00000034230	SBNO1	100	94.548	Rhinopithecus_roxellana
ENSCCAG00000035316	SBNO1	97	91.788	ENSSBOG00000015422	SBNO1	100	92.296	Saimiri_boliviensis_boliviensis
ENSCCAG00000035316	SBNO1	99	77.415	ENSSFOG00015019025	sbno1	99	76.596	Scleropages_formosus
ENSCCAG00000035316	SBNO1	99	72.202	ENSSMAG00000013640	sbno1	99	71.811	Scophthalmus_maximus
ENSCCAG00000035316	SBNO1	99	73.285	ENSSDUG00000023480	sbno1	99	71.268	Seriola_dumerili
ENSCCAG00000035316	SBNO1	99	73.285	ENSSLDG00000007928	sbno1	99	71.198	Seriola_lalandi_dorsalis
ENSCCAG00000035316	SBNO1	89	96.320	ENSSARG00000002594	SBNO1	89	96.320	Sorex_araneus
ENSCCAG00000035316	SBNO1	99	88.356	ENSSPUG00000012640	SBNO1	100	86.829	Sphenodon_punctatus
ENSCCAG00000035316	SBNO1	99	71.685	ENSSPAG00000016244	sbno1	99	70.790	Stegastes_partitus
ENSCCAG00000035316	SBNO1	100	95.368	ENSSSCG00000009776	SBNO1	100	93.615	Sus_scrofa
ENSCCAG00000035316	SBNO1	100	87.518	ENSTGUG00000005380	SBNO1	100	87.599	Taeniopygia_guttata
ENSCCAG00000035316	SBNO1	99	73.533	ENSTRUG00000018490	sbno1	99	72.967	Takifugu_rubripes
ENSCCAG00000035316	SBNO1	58	70.777	ENSTNIG00000013506	sbno1	99	71.375	Tetraodon_nigroviridis
ENSCCAG00000035316	SBNO1	100	93.831	ENSUAMG00000019671	SBNO1	100	93.831	Ursus_americanus
ENSCCAG00000035316	SBNO1	100	93.831	ENSUMAG00000004002	SBNO1	100	93.831	Ursus_maritimus
ENSCCAG00000035316	SBNO1	95	93.478	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSCCAG00000035316	SBNO1	100	93.687	ENSVVUG00000027807	SBNO1	100	93.687	Vulpes_vulpes
ENSCCAG00000035316	SBNO1	99	80.392	ENSXETG00000031930	SBNO1	99	77.746	Xenopus_tropicalis
ENSCCAG00000035316	SBNO1	87	70.209	ENSXCOG00000011607	sbno1	99	71.077	Xiphophorus_couchianus
ENSCCAG00000035316	SBNO1	99	72.389	ENSXMAG00000002140	sbno1	99	72.012	Xiphophorus_maculatus