EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000035652 (Gene tree)
Gene ID: 108302984
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 22586 bases
Position: chrKV389469.1:7628845-7651430
Accession: 108302984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000035458	zf-U11-48K	PF05253.12	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000053236	SNRNP48-201	4024	XM_017526740	ENSCCAP00000035458	339 (aa)	XP_017382229	A0A2K5S4Z5

Gene Model

Click here to download ENSCCAG00000035652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035652	SNRNP48	100	96.755	ENSG00000168566	SNRNP48	100	96.755	Homo_sapiens
ENSCCAG00000035652	SNRNP48	81	46.996	ENSAPOG00000021430	snrnp48	83	46.713	Acanthochromis_polyacanthus
ENSCCAG00000035652	SNRNP48	99	87.608	ENSAMEG00000017349	SNRNP48	100	86.455	Ailuropoda_melanoleuca
ENSCCAG00000035652	SNRNP48	83	46.290	ENSACIG00000002032	snrnp48	82	46.290	Amphilophus_citrinellus
ENSCCAG00000035652	SNRNP48	81	46.996	ENSAOCG00000010562	snrnp48	96	42.075	Amphiprion_ocellaris
ENSCCAG00000035652	SNRNP48	81	46.975	ENSAPEG00000003231	snrnp48	96	42.029	Amphiprion_percula
ENSCCAG00000035652	SNRNP48	77	50.000	ENSATEG00000020210	snrnp48	81	49.643	Anabas_testudineus
ENSCCAG00000035652	SNRNP48	83	65.068	ENSACAG00000002811	SNRNP48	89	64.828	Anolis_carolinensis
ENSCCAG00000035652	SNRNP48	100	97.935	ENSANAG00000033538	SNRNP48	100	97.935	Aotus_nancymaae
ENSCCAG00000035652	SNRNP48	94	44.753	ENSAMXG00000015309	snrnp48	85	47.038	Astyanax_mexicanus
ENSCCAG00000035652	SNRNP48	100	85.000	ENSBTAG00000001123	SNRNP48	100	85.294	Bos_taurus
ENSCCAG00000035652	SNRNP48	100	97.640	ENSCJAG00000021330	SNRNP48	100	97.640	Callithrix_jacchus
ENSCCAG00000035652	SNRNP48	99	89.881	ENSCAFG00000009574	SNRNP48	83	89.911	Canis_familiaris
ENSCCAG00000035652	SNRNP48	99	90.208	ENSCAFG00020013203	SNRNP48	99	90.208	Canis_lupus_dingo
ENSCCAG00000035652	SNRNP48	100	86.471	ENSCHIG00000015216	SNRNP48	100	86.765	Capra_hircus
ENSCCAG00000035652	SNRNP48	100	91.445	ENSTSYG00000000698	SNRNP48	100	91.445	Carlito_syrichta
ENSCCAG00000035652	SNRNP48	90	86.601	ENSCAPG00000006768	SNRNP48	99	86.275	Cavia_aperea
ENSCCAG00000035652	SNRNP48	100	88.791	ENSCPOG00000007910	SNRNP48	100	88.791	Cavia_porcellus
ENSCCAG00000035652	SNRNP48	100	96.165	ENSCATG00000033947	SNRNP48	100	96.165	Cercocebus_atys
ENSCCAG00000035652	SNRNP48	100	89.086	ENSCLAG00000003765	SNRNP48	100	89.086	Chinchilla_lanigera
ENSCCAG00000035652	SNRNP48	100	96.755	ENSCSAG00000007409	SNRNP48	100	96.755	Chlorocebus_sabaeus
ENSCCAG00000035652	SNRNP48	85	63.158	ENSCPBG00000019146	SNRNP48	90	63.973	Chrysemys_picta_bellii
ENSCCAG00000035652	SNRNP48	94	30.031	ENSCING00000004121	-	61	35.468	Ciona_intestinalis
ENSCCAG00000035652	SNRNP48	100	96.755	ENSCANG00000030017	SNRNP48	100	96.755	Colobus_angolensis_palliatus
ENSCCAG00000035652	SNRNP48	99	68.657	ENSCGRG00001008805	-	95	68.060	Cricetulus_griseus_chok1gshd
ENSCCAG00000035652	SNRNP48	100	87.021	ENSCGRG00001001076	-	100	86.136	Cricetulus_griseus_chok1gshd
ENSCCAG00000035652	SNRNP48	100	87.021	ENSCGRG00000007781	Snrnp48	100	86.136	Cricetulus_griseus_crigri
ENSCCAG00000035652	SNRNP48	76	48.450	ENSCSEG00000000722	snrnp48	71	48.450	Cynoglossus_semilaevis
ENSCCAG00000035652	SNRNP48	89	46.326	ENSCVAG00000019829	snrnp48	73	47.222	Cyprinodon_variegatus
ENSCCAG00000035652	SNRNP48	81	46.853	ENSDARG00000039989	snrnp48	83	45.548	Danio_rerio
ENSCCAG00000035652	SNRNP48	100	89.118	ENSDNOG00000014978	SNRNP48	100	89.118	Dasypus_novemcinctus
ENSCCAG00000035652	SNRNP48	99	87.906	ENSDORG00000015140	Snrnp48	99	87.316	Dipodomys_ordii
ENSCCAG00000035652	SNRNP48	99	90.828	ENSEASG00005012021	SNRNP48	99	90.828	Equus_asinus_asinus
ENSCCAG00000035652	SNRNP48	100	91.445	ENSECAG00000026937	SNRNP48	100	91.445	Equus_caballus
ENSCCAG00000035652	SNRNP48	100	70.000	ENSEEUG00000015437	SNRNP48	99	69.706	Erinaceus_europaeus
ENSCCAG00000035652	SNRNP48	86	47.138	ENSELUG00000009766	snrnp48	76	48.364	Esox_lucius
ENSCCAG00000035652	SNRNP48	100	92.035	ENSFCAG00000018853	SNRNP48	100	92.035	Felis_catus
ENSCCAG00000035652	SNRNP48	83	65.646	ENSFALG00000007797	SNRNP48	92	65.636	Ficedula_albicollis
ENSCCAG00000035652	SNRNP48	99	88.462	ENSFDAG00000009231	SNRNP48	100	88.201	Fukomys_damarensis
ENSCCAG00000035652	SNRNP48	59	56.931	ENSFHEG00000014647	snrnp48	97	46.128	Fundulus_heteroclitus
ENSCCAG00000035652	SNRNP48	73	47.984	ENSGMOG00000018599	-	86	45.936	Gadus_morhua
ENSCCAG00000035652	SNRNP48	78	66.787	ENSGALG00000013005	SNRNP48	82	68.163	Gallus_gallus
ENSCCAG00000035652	SNRNP48	73	50.593	ENSGAFG00000021639	snrnp48	80	47.535	Gambusia_affinis
ENSCCAG00000035652	SNRNP48	71	52.066	ENSGACG00000017756	-	84	48.084	Gasterosteus_aculeatus
ENSCCAG00000035652	SNRNP48	84	61.921	ENSGAGG00000000865	SNRNP48	96	62.626	Gopherus_agassizii
ENSCCAG00000035652	SNRNP48	100	96.755	ENSGGOG00000013220	SNRNP48	100	96.755	Gorilla_gorilla
ENSCCAG00000035652	SNRNP48	75	48.235	ENSHBUG00000017066	snrnp48	80	46.316	Haplochromis_burtoni
ENSCCAG00000035652	SNRNP48	99	89.645	ENSHGLG00000015241	SNRNP48	100	89.381	Heterocephalus_glaber_female
ENSCCAG00000035652	SNRNP48	99	89.645	ENSHGLG00100010027	SNRNP48	100	89.381	Heterocephalus_glaber_male
ENSCCAG00000035652	SNRNP48	73	46.614	ENSHCOG00000014066	snrnp48	78	45.126	Hippocampus_comes
ENSCCAG00000035652	SNRNP48	100	92.330	ENSSTOG00000014635	SNRNP48	100	94.000	Ictidomys_tridecemlineatus
ENSCCAG00000035652	SNRNP48	100	84.366	ENSJJAG00000011495	Snrnp48	100	84.366	Jaculus_jaculus
ENSCCAG00000035652	SNRNP48	90	44.625	ENSKMAG00000016514	snrnp48	80	46.975	Kryptolebias_marmoratus
ENSCCAG00000035652	SNRNP48	75	49.804	ENSLBEG00000026249	snrnp48	95	43.314	Labrus_bergylta
ENSCCAG00000035652	SNRNP48	98	53.412	ENSLACG00000003958	SNRNP48	99	51.594	Latimeria_chalumnae
ENSCCAG00000035652	SNRNP48	82	51.228	ENSLOCG00000004187	snrnp48	93	48.649	Lepisosteus_oculatus
ENSCCAG00000035652	SNRNP48	100	87.316	ENSLAFG00000011152	SNRNP48	100	87.316	Loxodonta_africana
ENSCCAG00000035652	SNRNP48	100	97.050	ENSMFAG00000045216	SNRNP48	100	97.050	Macaca_fascicularis
ENSCCAG00000035652	SNRNP48	100	97.050	ENSMMUG00000014785	SNRNP48	100	97.050	Macaca_mulatta
ENSCCAG00000035652	SNRNP48	100	97.050	ENSMNEG00000042269	SNRNP48	100	97.050	Macaca_nemestrina
ENSCCAG00000035652	SNRNP48	100	97.050	ENSMLEG00000034004	SNRNP48	100	97.050	Mandrillus_leucophaeus
ENSCCAG00000035652	SNRNP48	76	47.909	ENSMAMG00000018673	snrnp48	71	47.331	Mastacembelus_armatus
ENSCCAG00000035652	SNRNP48	83	65.646	ENSMGAG00000006037	SNRNP48	99	65.411	Meleagris_gallopavo
ENSCCAG00000035652	SNRNP48	100	87.611	ENSMAUG00000011944	Snrnp48	100	86.726	Mesocricetus_auratus
ENSCCAG00000035652	SNRNP48	100	90.560	ENSMICG00000012497	SNRNP48	100	90.560	Microcebus_murinus
ENSCCAG00000035652	SNRNP48	100	87.316	ENSMOCG00000015555	Snrnp48	100	86.431	Microtus_ochrogaster
ENSCCAG00000035652	SNRNP48	54	53.514	ENSMMOG00000003072	-	58	53.514	Mola_mola
ENSCCAG00000035652	SNRNP48	98	69.767	ENSMODG00000009996	SNRNP48	93	69.767	Monodelphis_domestica
ENSCCAG00000035652	SNRNP48	74	50.394	ENSMALG00000005725	snrnp48	82	47.535	Monopterus_albus
ENSCCAG00000035652	SNRNP48	100	86.726	MGP_CAROLIEiJ_G0018441	Snrnp48	100	85.841	Mus_caroli
ENSCCAG00000035652	SNRNP48	100	85.841	ENSMUSG00000021431	Snrnp48	100	84.956	Mus_musculus
ENSCCAG00000035652	SNRNP48	100	85.841	MGP_PahariEiJ_G0019509	Snrnp48	100	84.956	Mus_pahari
ENSCCAG00000035652	SNRNP48	100	85.251	MGP_SPRETEiJ_G0019321	Snrnp48	100	84.366	Mus_spretus
ENSCCAG00000035652	SNRNP48	99	86.391	ENSNGAG00000004849	Snrnp48	99	86.391	Nannospalax_galili
ENSCCAG00000035652	SNRNP48	75	47.843	ENSNBRG00000012127	snrnp48	80	45.965	Neolamprologus_brichardi
ENSCCAG00000035652	SNRNP48	100	97.050	ENSNLEG00000011667	SNRNP48	100	97.050	Nomascus_leucogenys
ENSCCAG00000035652	SNRNP48	95	76.780	ENSOPRG00000015471	SNRNP48	100	76.780	Ochotona_princeps
ENSCCAG00000035652	SNRNP48	96	44.073	ENSONIG00000001520	snrnp48	80	45.965	Oreochromis_niloticus
ENSCCAG00000035652	SNRNP48	57	61.538	ENSOANG00000019888	-	100	62.500	Ornithorhynchus_anatinus
ENSCCAG00000035652	SNRNP48	84	89.510	ENSOCUG00000005168	SNRNP48	100	88.816	Oryctolagus_cuniculus
ENSCCAG00000035652	SNRNP48	88	46.753	ENSORLG00000015654	snrnp48	82	47.241	Oryzias_latipes
ENSCCAG00000035652	SNRNP48	88	45.779	ENSORLG00020015976	snrnp48	70	46.552	Oryzias_latipes_hni
ENSCCAG00000035652	SNRNP48	88	46.753	ENSORLG00015022379	snrnp48	71	47.586	Oryzias_latipes_hsok
ENSCCAG00000035652	SNRNP48	83	47.222	ENSOMEG00000022007	snrnp48	82	47.917	Oryzias_melastigma
ENSCCAG00000035652	SNRNP48	92	90.354	ENSOGAG00000005275	SNRNP48	96	90.536	Otolemur_garnettii
ENSCCAG00000035652	SNRNP48	85	86.760	ENSOARG00000017319	SNRNP48	99	86.926	Ovis_aries
ENSCCAG00000035652	SNRNP48	100	97.050	ENSPPAG00000032873	SNRNP48	100	97.050	Pan_paniscus
ENSCCAG00000035652	SNRNP48	100	92.330	ENSPPRG00000004283	SNRNP48	100	92.330	Panthera_pardus
ENSCCAG00000035652	SNRNP48	85	93.031	ENSPTIG00000013502	SNRNP48	99	93.286	Panthera_tigris_altaica
ENSCCAG00000035652	SNRNP48	100	97.050	ENSPTRG00000017703	SNRNP48	100	97.050	Pan_troglodytes
ENSCCAG00000035652	SNRNP48	100	97.050	ENSPANG00000000771	SNRNP48	100	97.050	Papio_anubis
ENSCCAG00000035652	SNRNP48	94	46.087	ENSPKIG00000013703	snrnp48	70	44.940	Paramormyrops_kingsleyae
ENSCCAG00000035652	SNRNP48	87	61.613	ENSPSIG00000002213	SNRNP48	92	62.457	Pelodiscus_sinensis
ENSCCAG00000035652	SNRNP48	76	48.276	ENSPMGG00000008120	snrnp48	90	48.276	Periophthalmus_magnuspinnatus
ENSCCAG00000035652	SNRNP48	100	88.201	ENSPEMG00000008872	Snrnp48	100	87.906	Peromyscus_maniculatus_bairdii
ENSCCAG00000035652	SNRNP48	73	52.016	ENSPFOG00000003578	snrnp48	80	45.201	Poecilia_formosa
ENSCCAG00000035652	SNRNP48	68	50.427	ENSPLAG00000002290	snrnp48	79	50.000	Poecilia_latipinna
ENSCCAG00000035652	SNRNP48	73	51.210	ENSPMEG00000018033	snrnp48	80	44.582	Poecilia_mexicana
ENSCCAG00000035652	SNRNP48	71	51.852	ENSPREG00000018541	snrnp48	80	48.746	Poecilia_reticulata
ENSCCAG00000035652	SNRNP48	100	95.575	ENSPPYG00000016209	SNRNP48	100	95.575	Pongo_abelii
ENSCCAG00000035652	SNRNP48	79	69.663	ENSPCAG00000011991	SNRNP48	99	69.663	Procavia_capensis
ENSCCAG00000035652	SNRNP48	100	89.676	ENSPVAG00000002854	SNRNP48	100	89.676	Pteropus_vampyrus
ENSCCAG00000035652	SNRNP48	75	48.627	ENSPNYG00000015399	snrnp48	88	46.667	Pundamilia_nyererei
ENSCCAG00000035652	SNRNP48	100	86.431	ENSRNOG00000013756	Snrnp48	100	85.546	Rattus_norvegicus
ENSCCAG00000035652	SNRNP48	91	96.129	ENSRBIG00000043856	SNRNP48	97	96.711	Rhinopithecus_bieti
ENSCCAG00000035652	SNRNP48	100	96.755	ENSRROG00000043229	SNRNP48	100	96.755	Rhinopithecus_roxellana
ENSCCAG00000035652	SNRNP48	100	98.525	ENSSBOG00000019486	SNRNP48	100	98.525	Saimiri_boliviensis_boliviensis
ENSCCAG00000035652	SNRNP48	98	70.058	ENSSHAG00000014483	SNRNP48	99	70.058	Sarcophilus_harrisii
ENSCCAG00000035652	SNRNP48	71	52.419	ENSSFOG00015006610	snrnp48	68	49.828	Scleropages_formosus
ENSCCAG00000035652	SNRNP48	87	47.138	ENSSDUG00000014953	snrnp48	95	42.730	Seriola_dumerili
ENSCCAG00000035652	SNRNP48	88	46.557	ENSSLDG00000005989	snrnp48	97	42.029	Seriola_lalandi_dorsalis
ENSCCAG00000035652	SNRNP48	84	63.758	ENSSPUG00000006257	SNRNP48	84	64.164	Sphenodon_punctatus
ENSCCAG00000035652	SNRNP48	71	48.770	ENSSPAG00000006454	snrnp48	80	47.292	Stegastes_partitus
ENSCCAG00000035652	SNRNP48	83	64.846	ENSTGUG00000007575	SNRNP48	92	64.236	Taeniopygia_guttata
ENSCCAG00000035652	SNRNP48	92	43.038	ENSTRUG00000007031	snrnp48	93	43.963	Takifugu_rubripes
ENSCCAG00000035652	SNRNP48	75	46.667	ENSTNIG00000012977	-	76	46.484	Tetraodon_nigroviridis
ENSCCAG00000035652	SNRNP48	100	73.451	ENSTBEG00000015620	SNRNP48	100	73.451	Tupaia_belangeri
ENSCCAG00000035652	SNRNP48	100	89.086	ENSTTRG00000016715	SNRNP48	100	89.086	Tursiops_truncatus
ENSCCAG00000035652	SNRNP48	100	90.560	ENSUAMG00000003690	SNRNP48	100	89.381	Ursus_americanus
ENSCCAG00000035652	SNRNP48	85	86.063	ENSVPAG00000003557	SNRNP48	99	85.866	Vicugna_pacos
ENSCCAG00000035652	SNRNP48	99	89.911	ENSVVUG00000004996	SNRNP48	99	89.911	Vulpes_vulpes
ENSCCAG00000035652	SNRNP48	90	51.899	ENSXETG00000020447	snrnp48	99	48.870	Xenopus_tropicalis
ENSCCAG00000035652	SNRNP48	69	49.787	ENSXCOG00000004478	snrnp48	68	50.862	Xiphophorus_couchianus
ENSCCAG00000035652	SNRNP48	81	49.638	ENSXMAG00000013595	snrnp48	80	44.817	Xiphophorus_maculatus