EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000035656 (Gene tree)
Gene ID: 108299827
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 16920 bases
Position: chrKV389450.1:14630869-14647788
Accession: 108299827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000035463	tRNA-synt_1g	PF09334.11	5.7e-11	1	1
ENSCCAP00000035470	Anticodon_1	PF08264.13	2.5e-33	1	1
ENSCCAP00000035463	Anticodon_1	PF08264.13	1.5e-32	1	1
ENSCCAP00000035463	tRNA-synt_1	PF00133.22	1.3e-202	1	1
ENSCCAP00000035470	tRNA-synt_1	PF00133.22	5.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000053241	VARS-201	4301	XM_017522343	ENSCCAP00000035463	1264 (aa)	XP_017377832	A0A2K5S500
ENSCCAT00000053248	VARS-202	4358	-	ENSCCAP00000035470	402 (aa)	-	A0A2K5S512

Gene Model

Click here to download ENSCCAG00000035656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000035656	VARS	100	42.365	ENSCCAG00000037907	VARS2	91	52.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035656	VARS	100	97.864	ENSG00000204394	VARS	100	97.864	Homo_sapiens
ENSCCAG00000035656	VARS	98	64.234	ENSAPOG00000020691	vars	99	63.913	Acanthochromis_polyacanthus
ENSCCAG00000035656	VARS	98	64.234	ENSAPOG00000020921	vars	99	63.913	Acanthochromis_polyacanthus
ENSCCAG00000035656	VARS	100	95.025	ENSAMEG00000006417	VARS	100	94.862	Ailuropoda_melanoleuca
ENSCCAG00000035656	VARS	100	65.463	ENSACIG00000013752	vars	100	65.228	Amphilophus_citrinellus
ENSCCAG00000035656	VARS	100	64.313	ENSAOCG00000002447	vars	100	63.651	Amphiprion_ocellaris
ENSCCAG00000035656	VARS	100	64.313	ENSAPEG00000010638	vars	99	64.486	Amphiprion_percula
ENSCCAG00000035656	VARS	100	64.539	ENSATEG00000020219	vars	100	64.224	Anabas_testudineus
ENSCCAG00000035656	VARS	89	61.667	ENSACAG00000017289	-	100	61.667	Anolis_carolinensis
ENSCCAG00000035656	VARS	90	70.425	ENSACAG00000029133	-	99	70.859	Anolis_carolinensis
ENSCCAG00000035656	VARS	100	98.756	ENSANAG00000015453	VARS	100	98.734	Aotus_nancymaae
ENSCCAG00000035656	VARS	100	64.934	ENSACLG00000025699	vars	97	64.701	Astatotilapia_calliptera
ENSCCAG00000035656	VARS	94	65.638	ENSAMXG00000017716	vars	95	65.638	Astyanax_mexicanus
ENSCCAG00000035656	VARS	100	94.858	ENSBTAG00000005631	VARS	100	94.858	Bos_taurus
ENSCCAG00000035656	VARS	100	98.655	ENSCJAG00000002604	VARS	100	98.655	Callithrix_jacchus
ENSCCAG00000035656	VARS	100	94.776	ENSCAFG00000000636	VARS	100	94.383	Canis_familiaris
ENSCCAG00000035656	VARS	94	94.341	ENSCAFG00020020790	VARS	96	94.341	Canis_lupus_dingo
ENSCCAG00000035656	VARS	100	95.274	ENSCHIG00000011008	VARS	100	95.095	Capra_hircus
ENSCCAG00000035656	VARS	100	96.517	ENSTSYG00000001567	VARS	100	96.282	Carlito_syrichta
ENSCCAG00000035656	VARS	100	91.791	ENSCAPG00000013736	VARS	99	91.067	Cavia_aperea
ENSCCAG00000035656	VARS	100	92.040	ENSCPOG00000000870	VARS	100	91.851	Cavia_porcellus
ENSCCAG00000035656	VARS	100	97.389	ENSCATG00000022394	VARS	100	97.389	Cercocebus_atys
ENSCCAG00000035656	VARS	95	85.575	ENSCLAG00000009470	VARS	95	87.884	Chinchilla_lanigera
ENSCCAG00000035656	VARS	100	97.706	ENSCSAG00000008784	VARS	100	97.706	Chlorocebus_sabaeus
ENSCCAG00000035656	VARS	100	62.687	ENSCPBG00000007943	VARS	96	74.230	Chrysemys_picta_bellii
ENSCCAG00000035656	VARS	100	97.547	ENSCANG00000033570	VARS	100	97.547	Colobus_angolensis_palliatus
ENSCCAG00000035656	VARS	100	93.284	ENSCGRG00001005686	Vars	100	92.801	Cricetulus_griseus_chok1gshd
ENSCCAG00000035656	VARS	100	93.284	ENSCGRG00000013352	Vars	78	87.605	Cricetulus_griseus_crigri
ENSCCAG00000035656	VARS	100	64.506	ENSCSEG00000019652	vars	100	64.585	Cynoglossus_semilaevis
ENSCCAG00000035656	VARS	100	65.035	ENSCVAG00000022398	vars	100	65.167	Cyprinodon_variegatus
ENSCCAG00000035656	VARS	100	64.491	ENSDARG00000044575	vars	100	64.802	Danio_rerio
ENSCCAG00000035656	VARS	73	91.468	ENSDNOG00000038678	-	100	91.468	Dasypus_novemcinctus
ENSCCAG00000035656	VARS	100	94.527	ENSDORG00000016433	Vars	95	93.227	Dipodomys_ordii
ENSCCAG00000035656	VARS	66	92.920	ENSETEG00000003824	VARS	76	86.980	Echinops_telfairi
ENSCCAG00000035656	VARS	75	68.981	ENSEBUG00000007086	vars	84	69.634	Eptatretus_burgeri
ENSCCAG00000035656	VARS	100	54.187	ENSEBUG00000004637	vars	100	62.088	Eptatretus_burgeri
ENSCCAG00000035656	VARS	100	96.020	ENSEASG00005015673	VARS	100	95.965	Equus_asinus_asinus
ENSCCAG00000035656	VARS	100	95.522	ENSECAG00000014620	VARS	100	95.415	Equus_caballus
ENSCCAG00000035656	VARS	83	92.388	ENSEEUG00000004116	VARS	83	92.388	Erinaceus_europaeus
ENSCCAG00000035656	VARS	100	64.615	ENSELUG00000006550	vars	97	64.231	Esox_lucius
ENSCCAG00000035656	VARS	100	94.858	ENSFCAG00000004510	VARS	100	94.858	Felis_catus
ENSCCAG00000035656	VARS	82	92.268	ENSFDAG00000011401	VARS	100	92.268	Fukomys_damarensis
ENSCCAG00000035656	VARS	100	65.167	ENSFHEG00000010672	vars	100	65.298	Fundulus_heteroclitus
ENSCCAG00000035656	VARS	100	60.539	ENSGMOG00000014908	vars	97	65.975	Gadus_morhua
ENSCCAG00000035656	VARS	100	65.447	ENSGAFG00000021630	vars	100	65.603	Gambusia_affinis
ENSCCAG00000035656	VARS	100	58.128	ENSGACG00000009601	vars	98	65.917	Gasterosteus_aculeatus
ENSCCAG00000035656	VARS	50	65.457	ENSGAGG00000006508	-	91	64.984	Gopherus_agassizii
ENSCCAG00000035656	VARS	100	53.234	ENSGAGG00000006067	-	96	78.182	Gopherus_agassizii
ENSCCAG00000035656	VARS	100	98.022	ENSGGOG00000011364	VARS	100	98.022	Gorilla_gorilla
ENSCCAG00000035656	VARS	100	64.856	ENSHBUG00000017151	vars	97	64.624	Haplochromis_burtoni
ENSCCAG00000035656	VARS	100	90.744	ENSHGLG00000011646	VARS	100	90.427	Heterocephalus_glaber_female
ENSCCAG00000035656	VARS	100	85.012	ENSHGLG00100018062	VARS	100	83.056	Heterocephalus_glaber_male
ENSCCAG00000035656	VARS	99	64.341	ENSHCOG00000012198	vars	99	64.514	Hippocampus_comes
ENSCCAG00000035656	VARS	100	65.058	ENSIPUG00000005218	vars	100	65.058	Ictalurus_punctatus
ENSCCAG00000035656	VARS	100	95.025	ENSSTOG00000013112	VARS	100	94.704	Ictidomys_tridecemlineatus
ENSCCAG00000035656	VARS	100	78.358	ENSJJAG00000015343	-	99	73.515	Jaculus_jaculus
ENSCCAG00000035656	VARS	100	91.542	ENSJJAG00000019749	-	100	91.535	Jaculus_jaculus
ENSCCAG00000035656	VARS	100	64.929	ENSKMAG00000009455	vars	100	64.692	Kryptolebias_marmoratus
ENSCCAG00000035656	VARS	100	64.585	ENSLBEG00000010341	vars	100	64.348	Labrus_bergylta
ENSCCAG00000035656	VARS	94	62.428	ENSLACG00000015232	VARS	99	62.766	Latimeria_chalumnae
ENSCCAG00000035656	VARS	100	66.849	ENSLOCG00000004240	vars	100	66.849	Lepisosteus_oculatus
ENSCCAG00000035656	VARS	100	93.750	ENSLAFG00000023090	VARS	100	94.225	Loxodonta_africana
ENSCCAG00000035656	VARS	100	97.627	ENSMFAG00000001032	VARS	100	97.627	Macaca_fascicularis
ENSCCAG00000035656	VARS	100	97.627	ENSMMUG00000006828	VARS	100	97.627	Macaca_mulatta
ENSCCAG00000035656	VARS	100	97.627	ENSMNEG00000042072	VARS	100	97.627	Macaca_nemestrina
ENSCCAG00000035656	VARS	100	97.512	ENSMLEG00000039307	VARS	100	97.389	Mandrillus_leucophaeus
ENSCCAG00000035656	VARS	100	64.376	ENSMAMG00000003949	vars	100	64.743	Mastacembelus_armatus
ENSCCAG00000035656	VARS	100	64.934	ENSMZEG00005018327	vars	100	64.325	Maylandia_zebra
ENSCCAG00000035656	VARS	100	92.289	ENSMAUG00000006715	Vars	100	92.247	Mesocricetus_auratus
ENSCCAG00000035656	VARS	100	95.771	ENSMICG00000003548	VARS	100	95.771	Microcebus_murinus
ENSCCAG00000035656	VARS	100	93.781	ENSMOCG00000015404	Vars	100	90.269	Microtus_ochrogaster
ENSCCAG00000035656	VARS	100	64.129	ENSMMOG00000015801	vars	100	64.129	Mola_mola
ENSCCAG00000035656	VARS	84	61.988	ENSMODG00000001325	-	98	61.988	Monodelphis_domestica
ENSCCAG00000035656	VARS	100	86.946	ENSMODG00000015204	-	100	86.946	Monodelphis_domestica
ENSCCAG00000035656	VARS	99	64.280	ENSMALG00000022532	vars	99	63.965	Monopterus_albus
ENSCCAG00000035656	VARS	100	95.025	MGP_CAROLIEiJ_G0021491	Vars	100	93.196	Mus_caroli
ENSCCAG00000035656	VARS	100	94.527	ENSMUSG00000007029	Vars	100	93.196	Mus_musculus
ENSCCAG00000035656	VARS	100	94.030	MGP_PahariEiJ_G0020486	Vars	100	92.722	Mus_pahari
ENSCCAG00000035656	VARS	100	94.776	MGP_SPRETEiJ_G0022396	Vars	100	93.275	Mus_spretus
ENSCCAG00000035656	VARS	100	95.274	ENSMPUG00000010821	VARS	100	94.778	Mustela_putorius_furo
ENSCCAG00000035656	VARS	78	92.915	ENSMLUG00000013126	VARS	100	93.522	Myotis_lucifugus
ENSCCAG00000035656	VARS	100	93.532	ENSNGAG00000012151	Vars	100	91.930	Nannospalax_galili
ENSCCAG00000035656	VARS	100	64.779	ENSNBRG00000020520	vars	100	64.546	Neolamprologus_brichardi
ENSCCAG00000035656	VARS	100	97.231	ENSNLEG00000006351	VARS	100	97.231	Nomascus_leucogenys
ENSCCAG00000035656	VARS	100	83.228	ENSMEUG00000011378	VARS	100	83.228	Notamacropus_eugenii
ENSCCAG00000035656	VARS	100	93.908	ENSOPRG00000003607	VARS	100	93.908	Ochotona_princeps
ENSCCAG00000035656	VARS	100	91.294	ENSODEG00000017681	VARS	100	91.060	Octodon_degus
ENSCCAG00000035656	VARS	100	65.336	ENSONIG00000013064	vars	99	67.969	Oreochromis_niloticus
ENSCCAG00000035656	VARS	77	78.597	ENSOANG00000005400	VARS	98	78.121	Ornithorhynchus_anatinus
ENSCCAG00000035656	VARS	100	94.030	ENSOCUG00000022463	VARS	100	92.035	Oryctolagus_cuniculus
ENSCCAG00000035656	VARS	100	64.297	ENSORLG00000013063	vars	100	64.467	Oryzias_latipes
ENSCCAG00000035656	VARS	100	64.765	ENSORLG00020003504	vars	100	64.919	Oryzias_latipes_hni
ENSCCAG00000035656	VARS	100	64.738	ENSORLG00015009001	vars	100	64.892	Oryzias_latipes_hsok
ENSCCAG00000035656	VARS	100	64.660	ENSOMEG00000015016	vars	100	64.815	Oryzias_melastigma
ENSCCAG00000035656	VARS	100	95.025	ENSOGAG00000007515	VARS	100	94.858	Otolemur_garnettii
ENSCCAG00000035656	VARS	100	98.101	ENSPPAG00000034012	VARS	100	98.101	Pan_paniscus
ENSCCAG00000035656	VARS	100	95.274	ENSPPRG00000014855	VARS	100	95.016	Panthera_pardus
ENSCCAG00000035656	VARS	85	94.981	ENSPTIG00000010462	VARS	95	94.963	Panthera_tigris_altaica
ENSCCAG00000035656	VARS	100	98.022	ENSPTRG00000017985	VARS	100	98.022	Pan_troglodytes
ENSCCAG00000035656	VARS	100	97.512	ENSPANG00000014565	VARS	100	95.820	Papio_anubis
ENSCCAG00000035656	VARS	100	63.784	ENSPKIG00000016304	vars	100	63.938	Paramormyrops_kingsleyae
ENSCCAG00000035656	VARS	100	65.563	ENSPMGG00000023909	vars	100	65.642	Periophthalmus_magnuspinnatus
ENSCCAG00000035656	VARS	100	93.781	ENSPEMG00000006639	Vars	100	93.434	Peromyscus_maniculatus_bairdii
ENSCCAG00000035656	VARS	100	86.313	ENSPCIG00000018553	VARS	100	86.313	Phascolarctos_cinereus
ENSCCAG00000035656	VARS	100	65.603	ENSPFOG00000015690	vars	100	65.759	Poecilia_formosa
ENSCCAG00000035656	VARS	100	66.247	ENSPLAG00000009590	vars	100	66.247	Poecilia_latipinna
ENSCCAG00000035656	VARS	100	65.603	ENSPMEG00000004708	vars	100	65.759	Poecilia_mexicana
ENSCCAG00000035656	VARS	100	63.965	ENSPREG00000013264	vars	100	63.636	Poecilia_reticulata
ENSCCAG00000035656	VARS	100	96.282	ENSPPYG00000016460	VARS	100	96.282	Pongo_abelii
ENSCCAG00000035656	VARS	100	92.537	ENSPCAG00000013565	VARS	86	92.639	Procavia_capensis
ENSCCAG00000035656	VARS	100	97.264	ENSPCOG00000010942	VARS	100	95.889	Propithecus_coquereli
ENSCCAG00000035656	VARS	100	92.537	ENSPVAG00000012403	VARS	100	91.218	Pteropus_vampyrus
ENSCCAG00000035656	VARS	100	64.856	ENSPNYG00000022511	vars	100	64.624	Pundamilia_nyererei
ENSCCAG00000035656	VARS	100	64.469	ENSPNAG00000020962	vars	100	64.313	Pygocentrus_nattereri
ENSCCAG00000035656	VARS	100	94.030	ENSRNOG00000000867	Vars	100	93.196	Rattus_norvegicus
ENSCCAG00000035656	VARS	100	97.785	ENSRBIG00000041669	VARS	100	97.785	Rhinopithecus_bieti
ENSCCAG00000035656	VARS	100	97.785	ENSRROG00000045490	VARS	100	97.785	Rhinopithecus_roxellana
ENSCCAG00000035656	VARS	100	98.507	ENSSBOG00000035402	VARS	100	98.497	Saimiri_boliviensis_boliviensis
ENSCCAG00000035656	VARS	100	82.587	ENSSHAG00000006937	VARS	100	81.932	Sarcophilus_harrisii
ENSCCAG00000035656	VARS	100	64.402	ENSSFOG00015014272	vars	100	64.479	Scleropages_formosus
ENSCCAG00000035656	VARS	100	63.333	ENSSMAG00000009596	vars	99	63.538	Scophthalmus_maximus
ENSCCAG00000035656	VARS	100	64.142	ENSSDUG00000014177	vars	100	64.059	Seriola_dumerili
ENSCCAG00000035656	VARS	100	64.065	ENSSLDG00000025316	vars	100	63.981	Seriola_lalandi_dorsalis
ENSCCAG00000035656	VARS	100	64.541	ENSSPAG00000017068	vars	100	64.724	Stegastes_partitus
ENSCCAG00000035656	VARS	100	93.123	ENSSSCG00000038950	VARS	100	93.597	Sus_scrofa
ENSCCAG00000035656	VARS	85	51.906	ENSTRUG00000002238	-	99	52.199	Takifugu_rubripes
ENSCCAG00000035656	VARS	82	64.046	ENSTRUG00000012307	vars	98	64.088	Takifugu_rubripes
ENSCCAG00000035656	VARS	100	64.812	ENSTNIG00000008011	vars	100	64.969	Tetraodon_nigroviridis
ENSCCAG00000035656	VARS	54	97.378	ENSTBEG00000004728	-	60	97.378	Tupaia_belangeri
ENSCCAG00000035656	VARS	100	94.279	ENSTTRG00000014128	VARS	100	86.392	Tursiops_truncatus
ENSCCAG00000035656	VARS	100	94.349	ENSUAMG00000010424	VARS	100	91.588	Ursus_americanus
ENSCCAG00000035656	VARS	93	94.603	ENSUMAG00000013486	VARS	98	94.127	Ursus_maritimus
ENSCCAG00000035656	VARS	100	94.229	ENSVVUG00000021323	VARS	100	93.992	Vulpes_vulpes
ENSCCAG00000035656	VARS	100	59.701	ENSXETG00000024076	vars	98	62.460	Xenopus_tropicalis
ENSCCAG00000035656	VARS	100	65.512	ENSXCOG00000019172	vars	100	65.669	Xiphophorus_couchianus
ENSCCAG00000035656	VARS	100	65.292	ENSXMAG00000010927	vars	100	65.447	Xiphophorus_maculatus