EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000035711 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: X-ray repair cross-complementing protein 6-like
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 2805 bases
Position: chrKV389475.1:287054-289858
Accession: 108303592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000035657	SAP	PF02037.27	7.6e-10	1	1
ENSCCAP00000035637	SAP	PF02037.27	2.1e-09	1	1
ENSCCAP00000035646	SAP	PF02037.27	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000053426	-	1524	XM_017527503	ENSCCAP00000035646	507 (aa)	XP_017382992	A0A2K5S5J9
ENSCCAT00000053418	-	1365	-	ENSCCAP00000035637	454 (aa)	-	A0A2K5S5G7
ENSCCAT00000053437	-	564	-	ENSCCAP00000035657	187 (aa)	-	A0A2K5S5I3

Gene Model

Click here to download ENSCCAG00000035711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000035711	-	100	64.179	ENSCCAG00000037663	-	88	63.333
ENSCCAG00000035711	-	100	75.534	ENSCCAG00000030041	-	95	75.534
ENSCCAG00000035711	-	94	78.140	ENSCCAG00000030468	-	100	77.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035711	-	100	79.310	ENSG00000196419	XRCC6	100	79.310	Homo_sapiens
ENSCCAG00000035711	-	99	45.888	ENSAPOG00000012704	xrcc6	99	45.724	Acanthochromis_polyacanthus
ENSCCAG00000035711	-	99	46.053	ENSACIG00000021277	xrcc6	99	46.217	Amphilophus_citrinellus
ENSCCAG00000035711	-	99	44.408	ENSAOCG00000021344	xrcc6	99	44.663	Amphiprion_ocellaris
ENSCCAG00000035711	-	99	44.901	ENSAPEG00000020712	xrcc6	99	45.156	Amphiprion_percula
ENSCCAG00000035711	-	99	45.888	ENSATEG00000007119	xrcc6	99	45.888	Anabas_testudineus
ENSCCAG00000035711	-	97	55.249	ENSAPLG00000004469	XRCC6	99	55.072	Anas_platyrhynchos
ENSCCAG00000035711	-	100	74.662	ENSANAG00000020017	-	100	74.324	Aotus_nancymaae
ENSCCAG00000035711	-	100	75.685	ENSANAG00000023445	-	100	75.685	Aotus_nancymaae
ENSCCAG00000035711	-	100	80.296	ENSANAG00000018684	XRCC6	100	80.296	Aotus_nancymaae
ENSCCAG00000035711	-	100	68.801	ENSANAG00000035230	-	100	68.801	Aotus_nancymaae
ENSCCAG00000035711	-	99	45.559	ENSACLG00000018608	xrcc6	99	45.559	Astatotilapia_calliptera
ENSCCAG00000035711	-	99	46.972	ENSAMXG00000007545	xrcc6	99	46.809	Astyanax_mexicanus
ENSCCAG00000035711	-	100	77.533	ENSCJAG00000044926	-	100	77.533	Callithrix_jacchus
ENSCCAG00000035711	-	100	78.855	ENSCJAG00000043192	-	100	78.855	Callithrix_jacchus
ENSCCAG00000035711	-	100	78.855	ENSCJAG00000040177	-	100	78.855	Callithrix_jacchus
ENSCCAG00000035711	-	74	72.067	ENSCJAG00000039518	-	85	72.067	Callithrix_jacchus
ENSCCAG00000035711	-	100	80.460	ENSCJAG00000045512	XRCC6	100	80.460	Callithrix_jacchus
ENSCCAG00000035711	-	99	68.257	ENSTSYG00000011348	XRCC6	99	68.257	Carlito_syrichta
ENSCCAG00000035711	-	100	79.475	ENSCATG00000042366	XRCC6	100	79.475	Cercocebus_atys
ENSCCAG00000035711	-	99	68.040	ENSCLAG00000016669	XRCC6	99	67.545	Chinchilla_lanigera
ENSCCAG00000035711	-	100	79.475	ENSCSAG00000005784	XRCC6	100	79.475	Chlorocebus_sabaeus
ENSCCAG00000035711	-	99	57.800	ENSCPBG00000020535	XRCC6	99	58.128	Chrysemys_picta_bellii
ENSCCAG00000035711	-	92	32.394	ENSCSAVG00000000984	-	99	34.855	Ciona_savignyi
ENSCCAG00000035711	-	100	79.475	ENSCANG00000031032	XRCC6	100	79.475	Colobus_angolensis_palliatus
ENSCCAG00000035711	-	99	59.868	ENSCGRG00001019029	Xrcc6	99	59.868	Cricetulus_griseus_chok1gshd
ENSCCAG00000035711	-	99	67.763	ENSCGRG00000001528	Xrcc6	99	67.763	Cricetulus_griseus_crigri
ENSCCAG00000035711	-	99	45.990	ENSCSEG00000020434	xrcc6	99	45.990	Cynoglossus_semilaevis
ENSCCAG00000035711	-	99	45.140	ENSCVAG00000002189	xrcc6	99	44.481	Cyprinodon_variegatus
ENSCCAG00000035711	-	99	47.697	ENSDARG00000071551	xrcc6	99	47.697	Danio_rerio
ENSCCAG00000035711	-	75	81.696	ENSETEG00000015333	-	64	81.696	Echinops_telfairi
ENSCCAG00000035711	-	99	68.092	ENSEASG00005001514	XRCC6	99	68.586	Equus_asinus_asinus
ENSCCAG00000035711	-	99	67.599	ENSECAG00000017563	XRCC6	99	67.023	Equus_caballus
ENSCCAG00000035711	-	100	43.883	ENSELUG00000020301	xrcc6	100	43.719	Esox_lucius
ENSCCAG00000035711	-	99	55.246	ENSFALG00000011908	XRCC6	97	50.974	Ficedula_albicollis
ENSCCAG00000035711	-	99	45.799	ENSFHEG00000016833	xrcc6	99	45.305	Fundulus_heteroclitus
ENSCCAG00000035711	-	99	38.095	ENSGMOG00000013524	xrcc6	99	38.095	Gadus_morhua
ENSCCAG00000035711	-	99	55.319	ENSGALG00000011932	XRCC6	99	55.155	Gallus_gallus
ENSCCAG00000035711	-	99	44.316	ENSGAFG00000008130	xrcc6	99	43.822	Gambusia_affinis
ENSCCAG00000035711	-	99	44.046	ENSGACG00000004868	xrcc6	99	43.922	Gasterosteus_aculeatus
ENSCCAG00000035711	-	99	57.635	ENSGAGG00000017518	XRCC6	99	57.964	Gopherus_agassizii
ENSCCAG00000035711	-	100	73.684	ENSGGOG00000026303	-	100	73.684	Gorilla_gorilla
ENSCCAG00000035711	-	100	79.310	ENSGGOG00000015885	XRCC6	100	79.310	Gorilla_gorilla
ENSCCAG00000035711	-	98	45.355	ENSHBUG00000023281	xrcc6	99	45.455	Haplochromis_burtoni
ENSCCAG00000035711	-	99	66.557	ENSHGLG00000018078	XRCC6	99	66.063	Heterocephalus_glaber_female
ENSCCAG00000035711	-	99	66.557	ENSHGLG00100011264	XRCC6	99	66.063	Heterocephalus_glaber_male
ENSCCAG00000035711	-	99	43.328	ENSHCOG00000009821	xrcc6	99	43.493	Hippocampus_comes
ENSCCAG00000035711	-	98	45.471	ENSIPUG00000000767	xrcc6	96	46.508	Ictalurus_punctatus
ENSCCAG00000035711	-	99	69.572	ENSSTOG00000009490	XRCC6	99	70.230	Ictidomys_tridecemlineatus
ENSCCAG00000035711	-	99	68.151	ENSJJAG00000017136	Xrcc6	99	68.664	Jaculus_jaculus
ENSCCAG00000035711	-	99	44.975	ENSKMAG00000002141	xrcc6	99	44.975	Kryptolebias_marmoratus
ENSCCAG00000035711	-	99	44.975	ENSLBEG00000002691	xrcc6	98	44.316	Labrus_bergylta
ENSCCAG00000035711	-	99	40.248	ENSLOCG00000011533	xrcc6	99	41.062	Lepisosteus_oculatus
ENSCCAG00000035711	-	100	79.475	ENSMFAG00000003352	XRCC6	100	79.475	Macaca_fascicularis
ENSCCAG00000035711	-	100	79.475	ENSMMUG00000001856	XRCC6	100	79.475	Macaca_mulatta
ENSCCAG00000035711	-	100	79.475	ENSMNEG00000035076	XRCC6	100	79.475	Macaca_nemestrina
ENSCCAG00000035711	-	100	79.475	ENSMLEG00000019869	XRCC6	100	79.475	Mandrillus_leucophaeus
ENSCCAG00000035711	-	97	44.991	ENSMAMG00000003405	xrcc6	96	45.955	Mastacembelus_armatus
ENSCCAG00000035711	-	99	44.901	ENSMAMG00000003368	xrcc6	99	44.901	Mastacembelus_armatus
ENSCCAG00000035711	-	99	45.559	ENSMZEG00005028080	xrcc6	99	45.559	Maylandia_zebra
ENSCCAG00000035711	-	99	55.465	ENSMGAG00000012146	XRCC6	99	55.302	Meleagris_gallopavo
ENSCCAG00000035711	-	99	67.599	ENSMAUG00000017340	Xrcc6	99	67.599	Mesocricetus_auratus
ENSCCAG00000035711	-	99	68.092	ENSMOCG00000015717	Xrcc6	99	67.763	Microtus_ochrogaster
ENSCCAG00000035711	-	99	44.811	ENSMMOG00000003536	xrcc6	99	44.754	Mola_mola
ENSCCAG00000035711	-	99	46.481	ENSMALG00000013912	xrcc6	95	46.481	Monopterus_albus
ENSCCAG00000035711	-	99	68.268	MGP_CAROLIEiJ_G0020067	Xrcc6	99	68.268	Mus_caroli
ENSCCAG00000035711	-	99	66.776	ENSMUSG00000022471	Xrcc6	99	67.816	Mus_musculus
ENSCCAG00000035711	-	99	65.789	MGP_PahariEiJ_G0020069	Xrcc6	99	65.789	Mus_pahari
ENSCCAG00000035711	-	98	65.385	MGP_SPRETEiJ_G0020967	Xrcc6	99	66.781	Mus_spretus
ENSCCAG00000035711	-	99	66.612	ENSNGAG00000013750	Xrcc6	99	66.612	Nannospalax_galili
ENSCCAG00000035711	-	99	46.053	ENSNBRG00000004125	xrcc6	99	46.053	Neolamprologus_brichardi
ENSCCAG00000035711	-	100	75.330	ENSNLEG00000034343	-	100	75.330	Nomascus_leucogenys
ENSCCAG00000035711	-	98	63.486	ENSOPRG00000002386	XRCC6	99	64.828	Ochotona_princeps
ENSCCAG00000035711	-	99	67.731	ENSODEG00000015847	XRCC6	99	67.899	Octodon_degus
ENSCCAG00000035711	-	99	45.915	ENSONIG00000019715	xrcc6	99	46.166	Oreochromis_niloticus
ENSCCAG00000035711	-	94	59.722	ENSOANG00000011328	XRCC6	97	68.905	Ornithorhynchus_anatinus
ENSCCAG00000035711	-	100	68.473	ENSOCUG00000006948	XRCC6	100	68.801	Oryctolagus_cuniculus
ENSCCAG00000035711	-	99	45.890	ENSORLG00020007820	xrcc6	99	45.890	Oryzias_latipes_hni
ENSCCAG00000035711	-	99	44.408	ENSORLG00015006406	xrcc6	99	44.408	Oryzias_latipes_hsok
ENSCCAG00000035711	-	99	45.890	ENSOMEG00000008998	xrcc6	99	45.890	Oryzias_melastigma
ENSCCAG00000035711	-	99	68.750	ENSOGAG00000008821	XRCC6	99	69.408	Otolemur_garnettii
ENSCCAG00000035711	-	100	75.330	ENSPPAG00000043936	-	100	75.330	Pan_paniscus
ENSCCAG00000035711	-	100	78.533	ENSPPAG00000037167	XRCC6	100	78.292	Pan_paniscus
ENSCCAG00000035711	-	100	79.310	ENSPTRG00000045824	XRCC6	100	79.310	Pan_troglodytes
ENSCCAG00000035711	-	100	79.310	ENSPTRG00000022548	XRCC6	100	79.310	Pan_troglodytes
ENSCCAG00000035711	-	100	75.330	ENSPTRG00000043309	-	100	75.330	Pan_troglodytes
ENSCCAG00000035711	-	100	75.330	ENSPTRG00000040111	-	100	75.330	Pan_troglodytes
ENSCCAG00000035711	-	100	79.310	ENSPANG00000001252	XRCC6	100	79.310	Papio_anubis
ENSCCAG00000035711	-	99	49.100	ENSPKIG00000003974	xrcc6	99	49.264	Paramormyrops_kingsleyae
ENSCCAG00000035711	-	94	56.481	ENSPSIG00000016499	-	99	58.268	Pelodiscus_sinensis
ENSCCAG00000035711	-	98	45.092	ENSPMGG00000014220	xrcc6	100	45.258	Periophthalmus_magnuspinnatus
ENSCCAG00000035711	-	99	66.941	ENSPEMG00000023446	Xrcc6	99	66.941	Peromyscus_maniculatus_bairdii
ENSCCAG00000035711	-	100	62.951	ENSPCIG00000026409	XRCC6	99	63.279	Phascolarctos_cinereus
ENSCCAG00000035711	-	99	44.646	ENSPFOG00000017173	xrcc6	99	44.811	Poecilia_formosa
ENSCCAG00000035711	-	99	44.481	ENSPLAG00000000562	xrcc6	99	44.646	Poecilia_latipinna
ENSCCAG00000035711	-	99	44.811	ENSPMEG00000018478	xrcc6	99	44.975	Poecilia_mexicana
ENSCCAG00000035711	-	99	44.828	ENSPREG00000020957	xrcc6	93	44.992	Poecilia_reticulata
ENSCCAG00000035711	-	100	69.294	ENSPPYG00000011876	XRCC6	100	69.294	Pongo_abelii
ENSCCAG00000035711	-	99	67.928	ENSPVAG00000001168	XRCC6	99	67.763	Pteropus_vampyrus
ENSCCAG00000035711	-	99	45.559	ENSPNYG00000003815	xrcc6	99	43.349	Pundamilia_nyererei
ENSCCAG00000035711	-	99	66.118	ENSRNOG00000006392	Xrcc6	99	66.118	Rattus_norvegicus
ENSCCAG00000035711	-	98	77.666	ENSRBIG00000039794	XRCC6	99	78.464	Rhinopithecus_bieti
ENSCCAG00000035711	-	100	79.475	ENSRROG00000030297	XRCC6	100	79.475	Rhinopithecus_roxellana
ENSCCAG00000035711	-	100	74.009	ENSRROG00000037576	-	100	74.009	Rhinopithecus_roxellana
ENSCCAG00000035711	-	100	72.381	ENSSBOG00000025802	-	100	72.381	Saimiri_boliviensis_boliviensis
ENSCCAG00000035711	-	95	77.880	ENSSBOG00000024724	-	99	73.697	Saimiri_boliviensis_boliviensis
ENSCCAG00000035711	-	99	62.562	ENSSHAG00000010790	XRCC6	99	62.726	Sarcophilus_harrisii
ENSCCAG00000035711	-	99	48.940	ENSSFOG00015014409	xrcc6	99	49.425	Scleropages_formosus
ENSCCAG00000035711	-	99	46.382	ENSSMAG00000006496	xrcc6	99	46.546	Scophthalmus_maximus
ENSCCAG00000035711	-	99	46.154	ENSSDUG00000007542	xrcc6	99	46.154	Seriola_dumerili
ENSCCAG00000035711	-	99	45.663	ENSSLDG00000009974	xrcc6	99	45.663	Seriola_lalandi_dorsalis
ENSCCAG00000035711	-	99	58.785	ENSSPUG00000012086	XRCC6	99	59.113	Sphenodon_punctatus
ENSCCAG00000035711	-	99	45.172	ENSSPAG00000015199	xrcc6	99	45.172	Stegastes_partitus
ENSCCAG00000035711	-	98	55.191	ENSTGUG00000009852	-	95	51.278	Taeniopygia_guttata
ENSCCAG00000035711	-	99	44.811	ENSTRUG00000017070	xrcc6	99	44.646	Takifugu_rubripes
ENSCCAG00000035711	-	96	46.112	ENSTNIG00000012947	xrcc6	98	46.599	Tetraodon_nigroviridis
ENSCCAG00000035711	-	98	64.469	ENSTBEG00000011736	XRCC6	99	65.060	Tupaia_belangeri
ENSCCAG00000035711	-	91	70.755	ENSTTRG00000006749	XRCC6	88	70.755	Tursiops_truncatus
ENSCCAG00000035711	-	99	44.811	ENSXMAG00000009691	xrcc6	99	44.975	Xiphophorus_maculatus