EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000035744 (Gene tree)
Gene ID: 108293291
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 31060 bases
Position: chrKV389955.1:502117-533176
Accession: 108293291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000035664	MMR_HSR1	PF01926.23	4.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000053444	LSG1-201	1959	XM_017514623	ENSCCAP00000035664	652 (aa)	XP_017370112	A0A2K5S5L8

Gene Model

Click here to download ENSCCAG00000035744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035744	LSG1	100	92.705	ENSG00000041802	LSG1	98	96.552	Homo_sapiens
ENSCCAG00000035744	LSG1	99	63.636	ENSAPOG00000009694	lsg1	99	64.091	Acanthochromis_polyacanthus
ENSCCAG00000035744	LSG1	99	81.639	ENSAMEG00000009343	LSG1	99	81.639	Ailuropoda_melanoleuca
ENSCCAG00000035744	LSG1	98	64.697	ENSACIG00000012406	lsg1	99	64.590	Amphilophus_citrinellus
ENSCCAG00000035744	LSG1	99	63.182	ENSAOCG00000016066	lsg1	99	63.636	Amphiprion_ocellaris
ENSCCAG00000035744	LSG1	99	63.636	ENSAPEG00000003252	lsg1	99	63.636	Amphiprion_percula
ENSCCAG00000035744	LSG1	98	64.506	ENSATEG00000011794	lsg1	99	64.048	Anabas_testudineus
ENSCCAG00000035744	LSG1	95	64.127	ENSACAG00000004222	LSG1	99	63.911	Anolis_carolinensis
ENSCCAG00000035744	LSG1	100	97.264	ENSANAG00000021153	LSG1	100	97.264	Aotus_nancymaae
ENSCCAG00000035744	LSG1	99	63.664	ENSACLG00000000520	lsg1	99	64.902	Astatotilapia_calliptera
ENSCCAG00000035744	LSG1	99	62.985	ENSAMXG00000008271	lsg1	99	63.142	Astyanax_mexicanus
ENSCCAG00000035744	LSG1	100	83.308	ENSBTAG00000008461	LSG1	100	83.763	Bos_taurus
ENSCCAG00000035744	LSG1	66	50.510	WBGene00016907	C53H9.2	89	56.911	Caenorhabditis_elegans
ENSCCAG00000035744	LSG1	100	96.353	ENSCJAG00000013962	LSG1	100	96.353	Callithrix_jacchus
ENSCCAG00000035744	LSG1	95	83.840	ENSCAFG00000013445	LSG1	99	83.840	Canis_familiaris
ENSCCAG00000035744	LSG1	99	82.300	ENSCAFG00020002216	LSG1	99	83.307	Canis_lupus_dingo
ENSCCAG00000035744	LSG1	99	84.043	ENSCHIG00000015769	LSG1	99	84.043	Capra_hircus
ENSCCAG00000035744	LSG1	100	89.985	ENSTSYG00000001447	LSG1	100	89.985	Carlito_syrichta
ENSCCAG00000035744	LSG1	95	76.274	ENSCAPG00000009856	LSG1	100	75.680	Cavia_aperea
ENSCCAG00000035744	LSG1	100	92.553	ENSCATG00000042060	LSG1	100	91.185	Cercocebus_atys
ENSCCAG00000035744	LSG1	100	92.857	ENSCSAG00000008796	LSG1	92	92.857	Chlorocebus_sabaeus
ENSCCAG00000035744	LSG1	99	70.331	ENSCPBG00000015941	LSG1	83	70.331	Chrysemys_picta_bellii
ENSCCAG00000035744	LSG1	65	62.632	ENSCING00000007079	-	91	62.632	Ciona_intestinalis
ENSCCAG00000035744	LSG1	75	54.733	ENSCSAVG00000002514	-	96	54.733	Ciona_savignyi
ENSCCAG00000035744	LSG1	100	92.705	ENSCANG00000030709	LSG1	100	92.705	Colobus_angolensis_palliatus
ENSCCAG00000035744	LSG1	100	82.424	ENSCGRG00001019846	Lsg1	100	82.576	Cricetulus_griseus_chok1gshd
ENSCCAG00000035744	LSG1	100	82.424	ENSCGRG00000014617	Lsg1	100	82.576	Cricetulus_griseus_crigri
ENSCCAG00000035744	LSG1	98	64.615	ENSCSEG00000008522	lsg1	99	63.650	Cynoglossus_semilaevis
ENSCCAG00000035744	LSG1	97	65.421	ENSCVAG00000002484	lsg1	99	65.502	Cyprinodon_variegatus
ENSCCAG00000035744	LSG1	99	66.565	ENSDARG00000015352	lsg1	99	66.717	Danio_rerio
ENSCCAG00000035744	LSG1	100	83.082	ENSDNOG00000006224	LSG1	100	82.779	Dasypus_novemcinctus
ENSCCAG00000035744	LSG1	82	57.377	FBgn0266284	Ns3	91	55.642	Drosophila_melanogaster
ENSCCAG00000035744	LSG1	88	88.000	ENSETEG00000003888	LSG1	89	88.000	Echinops_telfairi
ENSCCAG00000035744	LSG1	88	56.114	ENSEBUG00000003119	lsg1	85	54.785	Eptatretus_burgeri
ENSCCAG00000035744	LSG1	100	85.584	ENSEASG00005000678	LSG1	100	85.584	Equus_asinus_asinus
ENSCCAG00000035744	LSG1	100	85.888	ENSECAG00000017659	LSG1	100	85.888	Equus_caballus
ENSCCAG00000035744	LSG1	88	83.621	ENSEEUG00000015217	LSG1	87	83.621	Erinaceus_europaeus
ENSCCAG00000035744	LSG1	99	61.246	ENSELUG00000023973	lsg1	99	61.246	Esox_lucius
ENSCCAG00000035744	LSG1	99	85.258	ENSFCAG00000024957	LSG1	99	85.258	Felis_catus
ENSCCAG00000035744	LSG1	92	65.090	ENSFALG00000007210	LSG1	94	64.239	Ficedula_albicollis
ENSCCAG00000035744	LSG1	100	77.376	ENSFDAG00000017373	LSG1	100	77.376	Fukomys_damarensis
ENSCCAG00000035744	LSG1	97	63.608	ENSFHEG00000003680	lsg1	99	64.157	Fundulus_heteroclitus
ENSCCAG00000035744	LSG1	82	71.250	ENSGMOG00000015834	lsg1	88	69.685	Gadus_morhua
ENSCCAG00000035744	LSG1	99	63.994	ENSGALG00000007058	LSG1	87	63.609	Gallus_gallus
ENSCCAG00000035744	LSG1	97	65.984	ENSGAFG00000015831	lsg1	99	65.284	Gambusia_affinis
ENSCCAG00000035744	LSG1	98	62.423	ENSGACG00000009323	lsg1	99	61.527	Gasterosteus_aculeatus
ENSCCAG00000035744	LSG1	100	92.857	ENSGGOG00000000520	LSG1	100	92.857	Gorilla_gorilla
ENSCCAG00000035744	LSG1	99	63.595	ENSHBUG00000005659	lsg1	99	64.840	Haplochromis_burtoni
ENSCCAG00000035744	LSG1	100	76.169	ENSHGLG00000017390	LSG1	100	76.923	Heterocephalus_glaber_female
ENSCCAG00000035744	LSG1	100	76.169	ENSHGLG00100018587	LSG1	100	76.923	Heterocephalus_glaber_male
ENSCCAG00000035744	LSG1	97	64.587	ENSHCOG00000016848	lsg1	99	63.268	Hippocampus_comes
ENSCCAG00000035744	LSG1	99	64.653	ENSIPUG00000008631	lsg1	99	64.955	Ictalurus_punctatus
ENSCCAG00000035744	LSG1	89	82.046	ENSSTOG00000010234	LSG1	100	83.925	Ictidomys_tridecemlineatus
ENSCCAG00000035744	LSG1	100	80.514	ENSJJAG00000015513	Lsg1	100	80.514	Jaculus_jaculus
ENSCCAG00000035744	LSG1	98	63.256	ENSKMAG00000009681	lsg1	99	62.918	Kryptolebias_marmoratus
ENSCCAG00000035744	LSG1	99	65.611	ENSLACG00000013399	LSG1	99	64.889	Latimeria_chalumnae
ENSCCAG00000035744	LSG1	98	65.224	ENSLOCG00000004918	lsg1	99	65.053	Lepisosteus_oculatus
ENSCCAG00000035744	LSG1	100	83.156	ENSLAFG00000012919	-	100	83.156	Loxodonta_africana
ENSCCAG00000035744	LSG1	100	92.705	ENSMFAG00000039903	LSG1	100	91.337	Macaca_fascicularis
ENSCCAG00000035744	LSG1	100	92.857	ENSMMUG00000010708	LSG1	100	92.857	Macaca_mulatta
ENSCCAG00000035744	LSG1	100	92.553	ENSMNEG00000031538	LSG1	100	91.185	Macaca_nemestrina
ENSCCAG00000035744	LSG1	100	92.857	ENSMLEG00000041184	LSG1	100	92.857	Mandrillus_leucophaeus
ENSCCAG00000035744	LSG1	99	63.485	ENSMAMG00000000470	lsg1	99	62.443	Mastacembelus_armatus
ENSCCAG00000035744	LSG1	99	63.746	ENSMZEG00005017865	lsg1	99	64.992	Maylandia_zebra
ENSCCAG00000035744	LSG1	88	65.417	ENSMGAG00000007050	LSG1	99	64.636	Meleagris_gallopavo
ENSCCAG00000035744	LSG1	91	82.747	ENSMAUG00000016976	Lsg1	93	82.747	Mesocricetus_auratus
ENSCCAG00000035744	LSG1	100	86.191	ENSMICG00000049087	LSG1	100	86.191	Microcebus_murinus
ENSCCAG00000035744	LSG1	100	81.860	ENSMOCG00000022136	Lsg1	100	82.470	Microtus_ochrogaster
ENSCCAG00000035744	LSG1	83	73.361	ENSMMOG00000008884	lsg1	99	71.854	Mola_mola
ENSCCAG00000035744	LSG1	99	58.886	ENSMODG00000019828	LSG1	99	58.621	Monodelphis_domestica
ENSCCAG00000035744	LSG1	100	81.459	MGP_CAROLIEiJ_G0020648	Lsg1	100	81.459	Mus_caroli
ENSCCAG00000035744	LSG1	100	82.219	ENSMUSG00000022538	Lsg1	100	82.219	Mus_musculus
ENSCCAG00000035744	LSG1	98	82.099	MGP_PahariEiJ_G0016352	Lsg1	100	82.094	Mus_pahari
ENSCCAG00000035744	LSG1	100	81.915	MGP_SPRETEiJ_G0021544	Lsg1	100	81.915	Mus_spretus
ENSCCAG00000035744	LSG1	99	82.827	ENSMPUG00000003734	LSG1	99	82.827	Mustela_putorius_furo
ENSCCAG00000035744	LSG1	99	85.281	ENSMLUG00000012548	LSG1	99	85.281	Myotis_lucifugus
ENSCCAG00000035744	LSG1	100	83.155	ENSNGAG00000021872	Lsg1	100	81.470	Nannospalax_galili
ENSCCAG00000035744	LSG1	100	92.553	ENSNLEG00000008293	LSG1	100	92.553	Nomascus_leucogenys
ENSCCAG00000035744	LSG1	68	69.072	ENSMEUG00000009041	-	82	69.072	Notamacropus_eugenii
ENSCCAG00000035744	LSG1	99	63.348	ENSONIG00000002635	lsg1	99	64.297	Oreochromis_niloticus
ENSCCAG00000035744	LSG1	95	72.178	ENSOANG00000012742	LSG1	99	71.701	Ornithorhynchus_anatinus
ENSCCAG00000035744	LSG1	100	85.281	ENSOCUG00000004817	LSG1	100	85.281	Oryctolagus_cuniculus
ENSCCAG00000035744	LSG1	98	64.577	ENSORLG00000007695	lsg1	99	64.516	Oryzias_latipes
ENSCCAG00000035744	LSG1	98	64.319	ENSORLG00020016286	lsg1	99	63.872	Oryzias_latipes_hni
ENSCCAG00000035744	LSG1	98	64.734	ENSORLG00015012025	lsg1	99	64.363	Oryzias_latipes_hsok
ENSCCAG00000035744	LSG1	98	62.791	ENSOMEG00000022379	lsg1	99	63.070	Oryzias_melastigma
ENSCCAG00000035744	LSG1	100	85.650	ENSOGAG00000003475	LSG1	100	85.650	Otolemur_garnettii
ENSCCAG00000035744	LSG1	99	82.853	ENSOARG00000020403	LSG1	99	83.308	Ovis_aries
ENSCCAG00000035744	LSG1	100	92.097	ENSPPAG00000029271	LSG1	100	92.097	Pan_paniscus
ENSCCAG00000035744	LSG1	99	84.361	ENSPPRG00000010281	LSG1	99	84.361	Panthera_pardus
ENSCCAG00000035744	LSG1	99	85.106	ENSPTIG00000010789	LSG1	99	85.106	Panthera_tigris_altaica
ENSCCAG00000035744	LSG1	100	92.097	ENSPTRG00000015760	LSG1	100	92.097	Pan_troglodytes
ENSCCAG00000035744	LSG1	100	92.705	ENSPANG00000018249	LSG1	100	91.337	Papio_anubis
ENSCCAG00000035744	LSG1	96	63.793	ENSPKIG00000002895	lsg1	100	62.594	Paramormyrops_kingsleyae
ENSCCAG00000035744	LSG1	96	64.651	ENSPSIG00000009821	LSG1	99	64.031	Pelodiscus_sinensis
ENSCCAG00000035744	LSG1	95	63.854	ENSPMGG00000000931	lsg1	99	62.934	Periophthalmus_magnuspinnatus
ENSCCAG00000035744	LSG1	100	81.873	ENSPEMG00000012082	-	100	81.420	Peromyscus_maniculatus_bairdii
ENSCCAG00000035744	LSG1	99	59.071	ENSPMAG00000007451	lsg1	99	58.978	Petromyzon_marinus
ENSCCAG00000035744	LSG1	99	66.316	ENSPCIG00000013890	LSG1	83	66.316	Phascolarctos_cinereus
ENSCCAG00000035744	LSG1	97	65.224	ENSPFOG00000021882	lsg1	99	64.910	Poecilia_formosa
ENSCCAG00000035744	LSG1	97	65.367	ENSPLAG00000019536	lsg1	99	65.554	Poecilia_latipinna
ENSCCAG00000035744	LSG1	97	64.407	ENSPMEG00000017281	lsg1	99	64.114	Poecilia_mexicana
ENSCCAG00000035744	LSG1	97	56.260	ENSPREG00000006048	lsg1	99	55.922	Poecilia_reticulata
ENSCCAG00000035744	LSG1	92	91.269	ENSPPYG00000014425	LSG1	100	90.445	Pongo_abelii
ENSCCAG00000035744	LSG1	90	88.000	ENSPCAG00000005511	LSG1	90	88.000	Procavia_capensis
ENSCCAG00000035744	LSG1	100	88.668	ENSPCOG00000012360	LSG1	100	88.668	Propithecus_coquereli
ENSCCAG00000035744	LSG1	99	63.514	ENSPNYG00000021994	lsg1	99	64.750	Pundamilia_nyererei
ENSCCAG00000035744	LSG1	99	64.750	ENSPNAG00000015533	lsg1	99	64.787	Pygocentrus_nattereri
ENSCCAG00000035744	LSG1	100	82.353	ENSRNOG00000001727	Lsg1	100	82.353	Rattus_norvegicus
ENSCCAG00000035744	LSG1	100	92.249	ENSRBIG00000029053	LSG1	100	92.249	Rhinopithecus_bieti
ENSCCAG00000035744	LSG1	100	92.249	ENSRROG00000037702	LSG1	100	92.249	Rhinopithecus_roxellana
ENSCCAG00000035744	LSG1	74	45.022	YGL099W	LSG1	74	45.455	Saccharomyces_cerevisiae
ENSCCAG00000035744	LSG1	100	96.657	ENSSBOG00000034938	LSG1	100	96.657	Saimiri_boliviensis_boliviensis
ENSCCAG00000035744	LSG1	78	65.655	ENSSHAG00000003487	LSG1	99	64.906	Sarcophilus_harrisii
ENSCCAG00000035744	LSG1	98	63.256	ENSSFOG00015008955	lsg1	99	62.822	Scleropages_formosus
ENSCCAG00000035744	LSG1	98	63.872	ENSSDUG00000004622	lsg1	99	63.691	Seriola_dumerili
ENSCCAG00000035744	LSG1	98	64.043	ENSSLDG00000010869	lsg1	99	63.775	Seriola_lalandi_dorsalis
ENSCCAG00000035744	LSG1	81	82.596	ENSSARG00000012981	LSG1	81	82.596	Sorex_araneus
ENSCCAG00000035744	LSG1	99	66.966	ENSSPUG00000016347	LSG1	99	66.717	Sphenodon_punctatus
ENSCCAG00000035744	LSG1	99	64.220	ENSSPAG00000005508	lsg1	99	63.664	Stegastes_partitus
ENSCCAG00000035744	LSG1	99	84.347	ENSSSCG00000011827	LSG1	99	83.739	Sus_scrofa
ENSCCAG00000035744	LSG1	89	63.025	ENSTGUG00000009068	LSG1	99	62.604	Taeniopygia_guttata
ENSCCAG00000035744	LSG1	97	62.637	ENSTRUG00000017380	lsg1	99	62.232	Takifugu_rubripes
ENSCCAG00000035744	LSG1	97	63.889	ENSTNIG00000015570	lsg1	99	63.705	Tetraodon_nigroviridis
ENSCCAG00000035744	LSG1	99	77.086	ENSTTRG00000000559	LSG1	99	76.176	Tursiops_truncatus
ENSCCAG00000035744	LSG1	99	82.979	ENSUAMG00000012454	LSG1	99	82.979	Ursus_americanus
ENSCCAG00000035744	LSG1	99	82.979	ENSUMAG00000000855	LSG1	99	82.979	Ursus_maritimus
ENSCCAG00000035744	LSG1	95	79.840	ENSVPAG00000012400	LSG1	99	79.840	Vicugna_pacos
ENSCCAG00000035744	LSG1	95	84.491	ENSVVUG00000008956	LSG1	97	84.491	Vulpes_vulpes
ENSCCAG00000035744	LSG1	99	66.316	ENSXETG00000003451	lsg1	99	66.513	Xenopus_tropicalis
ENSCCAG00000035744	LSG1	97	65.156	ENSXCOG00000003239	lsg1	99	64.643	Xiphophorus_couchianus
ENSCCAG00000035744	LSG1	97	65.252	ENSXMAG00000005536	lsg1	99	64.590	Xiphophorus_maculatus