EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000035754 (Gene tree)
Gene ID: 108294642
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 39980 bases
Position: chrKV390020.1:311430-351409
Accession: 108294642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000035721	YTH	PF04146.15	1.1e-39	1	1
ENSCCAP00000035735	YTH	PF04146.15	1.1e-39	1	1
ENSCCAP00000035711	YTH	PF04146.15	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000053501	YTHDC1-202	3256	XM_017516563	ENSCCAP00000035721	708 (aa)	XP_017372052	A0A2K5S5S2
ENSCCAT00000053515	YTHDC1-203	2166	-	ENSCCAP00000035735	721 (aa)	-	A0A2K5S5T0
ENSCCAT00000053491	YTHDC1-201	6643	XM_017516561	ENSCCAP00000035711	726 (aa)	XP_017372050	A0A2K5S5R2

Gene Model

Click here to download ENSCCAG00000035754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035754's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035754	YTHDC1	100	99.450	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSCCAG00000035754	YTHDC1	57	59.759	ENSAPOG00000013997	ythdc1	57	62.768	Acanthochromis_polyacanthus
ENSCCAG00000035754	YTHDC1	100	97.538	ENSAMEG00000005688	YTHDC1	100	97.538	Ailuropoda_melanoleuca
ENSCCAG00000035754	YTHDC1	71	58.513	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSCCAG00000035754	YTHDC1	57	61.468	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSCCAG00000035754	YTHDC1	50	65.840	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSCCAG00000035754	YTHDC1	92	85.219	ENSAPLG00000009921	YTHDC1	92	86.727	Anas_platyrhynchos
ENSCCAG00000035754	YTHDC1	93	83.952	ENSACAG00000009697	YTHDC1	93	83.952	Anolis_carolinensis
ENSCCAG00000035754	YTHDC1	100	99.313	ENSANAG00000001522	YTHDC1	100	99.313	Aotus_nancymaae
ENSCCAG00000035754	YTHDC1	57	59.633	ENSACLG00000019371	ythdc1	59	66.362	Astatotilapia_calliptera
ENSCCAG00000035754	YTHDC1	93	64.595	ENSAMXG00000006978	ythdc1	92	66.087	Astyanax_mexicanus
ENSCCAG00000035754	YTHDC1	100	97.531	ENSBTAG00000015572	YTHDC1	100	97.531	Bos_taurus
ENSCCAG00000035754	YTHDC1	100	99.725	ENSCJAG00000009934	YTHDC1	100	99.725	Callithrix_jacchus
ENSCCAG00000035754	YTHDC1	100	97.538	ENSCAFG00000002821	YTHDC1	100	97.538	Canis_familiaris
ENSCCAG00000035754	YTHDC1	100	97.538	ENSCAFG00020027112	YTHDC1	100	97.538	Canis_lupus_dingo
ENSCCAG00000035754	YTHDC1	91	89.008	ENSCHIG00000004810	YTHDC1	95	94.275	Capra_hircus
ENSCCAG00000035754	YTHDC1	100	99.312	ENSTSYG00000011668	YTHDC1	100	99.312	Carlito_syrichta
ENSCCAG00000035754	YTHDC1	90	70.423	ENSCAPG00000008722	YTHDC1	90	69.969	Cavia_aperea
ENSCCAG00000035754	YTHDC1	100	91.197	ENSCPOG00000010929	YTHDC1	100	91.197	Cavia_porcellus
ENSCCAG00000035754	YTHDC1	100	99.296	ENSCATG00000036320	YTHDC1	100	99.296	Cercocebus_atys
ENSCCAG00000035754	YTHDC1	99	97.994	ENSCLAG00000005482	YTHDC1	99	97.994	Chinchilla_lanigera
ENSCCAG00000035754	YTHDC1	100	99.313	ENSCSAG00000005252	YTHDC1	100	99.313	Chlorocebus_sabaeus
ENSCCAG00000035754	YTHDC1	92	87.349	ENSCPBG00000021965	YTHDC1	94	87.635	Chrysemys_picta_bellii
ENSCCAG00000035754	YTHDC1	100	99.451	ENSCANG00000004769	YTHDC1	100	99.451	Colobus_angolensis_palliatus
ENSCCAG00000035754	YTHDC1	100	97.461	ENSCGRG00001000816	Ythdc1	100	97.461	Cricetulus_griseus_chok1gshd
ENSCCAG00000035754	YTHDC1	99	97.493	ENSCGRG00000009807	Ythdc1	99	97.493	Cricetulus_griseus_crigri
ENSCCAG00000035754	YTHDC1	57	60.352	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSCCAG00000035754	YTHDC1	57	59.424	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSCCAG00000035754	YTHDC1	93	63.743	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSCCAG00000035754	YTHDC1	100	97.387	ENSDNOG00000004949	YTHDC1	100	97.387	Dasypus_novemcinctus
ENSCCAG00000035754	YTHDC1	99	98.331	ENSDORG00000013045	Ythdc1	100	98.331	Dipodomys_ordii
ENSCCAG00000035754	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSCCAG00000035754	YTHDC1	100	98.085	ENSEASG00005018383	YTHDC1	100	98.085	Equus_asinus_asinus
ENSCCAG00000035754	YTHDC1	100	97.674	ENSECAG00000018303	YTHDC1	100	97.674	Equus_caballus
ENSCCAG00000035754	YTHDC1	100	96.433	ENSEEUG00000015466	YTHDC1	100	96.433	Erinaceus_europaeus
ENSCCAG00000035754	YTHDC1	93	61.790	ENSELUG00000014029	ythdc1	95	62.766	Esox_lucius
ENSCCAG00000035754	YTHDC1	100	97.397	ENSFCAG00000026791	YTHDC1	100	97.397	Felis_catus
ENSCCAG00000035754	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	93.917	Ficedula_albicollis
ENSCCAG00000035754	YTHDC1	99	98.184	ENSFDAG00000018560	YTHDC1	100	98.184	Fukomys_damarensis
ENSCCAG00000035754	YTHDC1	65	66.667	ENSFHEG00000001286	ythdc1	60	56.325	Fundulus_heteroclitus
ENSCCAG00000035754	YTHDC1	64	64.184	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSCCAG00000035754	YTHDC1	92	86.425	ENSGALG00000035906	YTHDC1	85	86.425	Gallus_gallus
ENSCCAG00000035754	YTHDC1	51	65.233	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSCCAG00000035754	YTHDC1	57	62.383	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSCCAG00000035754	YTHDC1	93	85.463	ENSGAGG00000007108	YTHDC1	93	85.463	Gopherus_agassizii
ENSCCAG00000035754	YTHDC1	100	99.296	ENSGGOG00000021958	YTHDC1	100	99.296	Gorilla_gorilla
ENSCCAG00000035754	YTHDC1	57	59.633	ENSHBUG00000019288	ythdc1	59	66.362	Haplochromis_burtoni
ENSCCAG00000035754	YTHDC1	94	71.491	ENSHGLG00000003239	-	57	78.708	Heterocephalus_glaber_female
ENSCCAG00000035754	YTHDC1	100	97.740	ENSHGLG00000006319	-	100	97.740	Heterocephalus_glaber_female
ENSCCAG00000035754	YTHDC1	94	70.015	ENSHGLG00100008060	-	57	76.247	Heterocephalus_glaber_male
ENSCCAG00000035754	YTHDC1	100	96.849	ENSHGLG00100001556	-	100	96.849	Heterocephalus_glaber_male
ENSCCAG00000035754	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSCCAG00000035754	YTHDC1	93	67.784	ENSIPUG00000018136	ythdc1	61	83.759	Ictalurus_punctatus
ENSCCAG00000035754	YTHDC1	100	97.826	ENSSTOG00000013652	YTHDC1	100	97.826	Ictidomys_tridecemlineatus
ENSCCAG00000035754	YTHDC1	91	92.081	ENSJJAG00000010268	Ythdc1	93	92.250	Jaculus_jaculus
ENSCCAG00000035754	YTHDC1	57	60.502	ENSKMAG00000006483	ythdc1	85	65.533	Kryptolebias_marmoratus
ENSCCAG00000035754	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSCCAG00000035754	YTHDC1	87	73.071	ENSLACG00000004893	YTHDC1	92	74.138	Latimeria_chalumnae
ENSCCAG00000035754	YTHDC1	93	73.481	ENSLOCG00000003045	ythdc1	92	88.702	Lepisosteus_oculatus
ENSCCAG00000035754	YTHDC1	100	96.322	ENSLAFG00000021592	YTHDC1	100	96.322	Loxodonta_africana
ENSCCAG00000035754	YTHDC1	100	99.437	ENSMFAG00000031927	YTHDC1	100	99.437	Macaca_fascicularis
ENSCCAG00000035754	YTHDC1	100	99.451	ENSMMUG00000002265	YTHDC1	100	99.451	Macaca_mulatta
ENSCCAG00000035754	YTHDC1	100	99.451	ENSMNEG00000033751	YTHDC1	100	99.451	Macaca_nemestrina
ENSCCAG00000035754	YTHDC1	100	99.313	ENSMLEG00000042147	YTHDC1	100	99.313	Mandrillus_leucophaeus
ENSCCAG00000035754	YTHDC1	56	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSCCAG00000035754	YTHDC1	57	59.633	ENSMZEG00005023173	ythdc1	59	66.362	Maylandia_zebra
ENSCCAG00000035754	YTHDC1	93	85.141	ENSMGAG00000010391	YTHDC1	92	86.478	Meleagris_gallopavo
ENSCCAG00000035754	YTHDC1	100	97.179	ENSMAUG00000001286	Ythdc1	100	97.179	Mesocricetus_auratus
ENSCCAG00000035754	YTHDC1	100	97.151	ENSMICG00000034640	YTHDC1	100	97.151	Microcebus_murinus
ENSCCAG00000035754	YTHDC1	100	97.599	ENSMOCG00000020201	Ythdc1	100	97.599	Microtus_ochrogaster
ENSCCAG00000035754	YTHDC1	65	57.872	ENSMODG00000009173	-	88	61.594	Monodelphis_domestica
ENSCCAG00000035754	YTHDC1	93	89.583	ENSMODG00000020754	-	92	88.839	Monodelphis_domestica
ENSCCAG00000035754	YTHDC1	87	69.476	ENSMODG00000014337	-	95	69.830	Monodelphis_domestica
ENSCCAG00000035754	YTHDC1	96	51.271	ENSMODG00000010076	-	60	61.538	Monodelphis_domestica
ENSCCAG00000035754	YTHDC1	50	67.385	ENSMALG00000013412	ythdc1	56	69.054	Monopterus_albus
ENSCCAG00000035754	YTHDC1	100	97.119	MGP_CAROLIEiJ_G0027347	Ythdc1	100	97.119	Mus_caroli
ENSCCAG00000035754	YTHDC1	100	96.982	ENSMUSG00000035851	Ythdc1	100	96.982	Mus_musculus
ENSCCAG00000035754	YTHDC1	100	97.119	MGP_PahariEiJ_G0017126	Ythdc1	100	97.119	Mus_pahari
ENSCCAG00000035754	YTHDC1	100	97.257	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.257	Mus_spretus
ENSCCAG00000035754	YTHDC1	99	97.765	ENSMLUG00000016300	YTHDC1	100	97.765	Myotis_lucifugus
ENSCCAG00000035754	YTHDC1	59	96.437	ENSNGAG00000024000	Ythdc1	93	96.437	Nannospalax_galili
ENSCCAG00000035754	YTHDC1	57	60.422	ENSNBRG00000007663	ythdc1	70	66.589	Neolamprologus_brichardi
ENSCCAG00000035754	YTHDC1	99	97.531	ENSNLEG00000009202	YTHDC1	99	97.531	Nomascus_leucogenys
ENSCCAG00000035754	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSCCAG00000035754	YTHDC1	75	99.150	ENSOPRG00000008986	YTHDC1	74	99.150	Ochotona_princeps
ENSCCAG00000035754	YTHDC1	100	97.521	ENSODEG00000001715	YTHDC1	100	97.521	Octodon_degus
ENSCCAG00000035754	YTHDC1	57	60.780	ENSONIG00000012651	ythdc1	59	66.819	Oreochromis_niloticus
ENSCCAG00000035754	YTHDC1	89	74.887	ENSOANG00000014398	YTHDC1	55	95.443	Ornithorhynchus_anatinus
ENSCCAG00000035754	YTHDC1	93	82.249	ENSOCUG00000015886	YTHDC1	57	95.729	Oryctolagus_cuniculus
ENSCCAG00000035754	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSCCAG00000035754	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSCCAG00000035754	YTHDC1	56	61.520	ENSOMEG00000000551	ythdc1	60	65.526	Oryzias_melastigma
ENSCCAG00000035754	YTHDC1	100	97.937	ENSOGAG00000003362	YTHDC1	100	97.937	Otolemur_garnettii
ENSCCAG00000035754	YTHDC1	100	97.531	ENSOARG00000008633	YTHDC1	100	97.531	Ovis_aries
ENSCCAG00000035754	YTHDC1	100	99.436	ENSPPAG00000041315	YTHDC1	100	99.436	Pan_paniscus
ENSCCAG00000035754	YTHDC1	100	97.472	ENSPPRG00000011979	YTHDC1	100	97.472	Panthera_pardus
ENSCCAG00000035754	YTHDC1	99	97.151	ENSPTIG00000015527	YTHDC1	100	97.151	Panthera_tigris_altaica
ENSCCAG00000035754	YTHDC1	100	99.436	ENSPTRG00000016105	YTHDC1	100	99.436	Pan_troglodytes
ENSCCAG00000035754	YTHDC1	100	99.296	ENSPANG00000021590	YTHDC1	100	99.296	Papio_anubis
ENSCCAG00000035754	YTHDC1	93	69.051	ENSPKIG00000018497	ythdc1	93	68.996	Paramormyrops_kingsleyae
ENSCCAG00000035754	YTHDC1	92	86.747	ENSPSIG00000002782	YTHDC1	92	86.898	Pelodiscus_sinensis
ENSCCAG00000035754	YTHDC1	55	56.667	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSCCAG00000035754	YTHDC1	99	97.768	ENSPEMG00000013850	Ythdc1	100	97.768	Peromyscus_maniculatus_bairdii
ENSCCAG00000035754	YTHDC1	93	89.435	ENSPCIG00000006870	YTHDC1	92	88.690	Phascolarctos_cinereus
ENSCCAG00000035754	YTHDC1	57	59.545	ENSPFOG00000013404	ythdc1	60	65.625	Poecilia_formosa
ENSCCAG00000035754	YTHDC1	57	59.545	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSCCAG00000035754	YTHDC1	57	59.545	ENSPMEG00000009238	ythdc1	60	65.625	Poecilia_mexicana
ENSCCAG00000035754	YTHDC1	71	59.135	ENSPREG00000016973	ythdc1	59	60.050	Poecilia_reticulata
ENSCCAG00000035754	YTHDC1	87	99.209	ENSPPYG00000014726	YTHDC1	100	99.209	Pongo_abelii
ENSCCAG00000035754	YTHDC1	77	94.428	ENSPCAG00000009607	YTHDC1	77	94.428	Procavia_capensis
ENSCCAG00000035754	YTHDC1	100	93.530	ENSPCOG00000019105	YTHDC1	100	93.530	Propithecus_coquereli
ENSCCAG00000035754	YTHDC1	100	95.355	ENSPVAG00000015551	YTHDC1	100	95.355	Pteropus_vampyrus
ENSCCAG00000035754	YTHDC1	57	59.633	ENSPNYG00000011687	ythdc1	59	66.362	Pundamilia_nyererei
ENSCCAG00000035754	YTHDC1	93	69.622	ENSPNAG00000028365	ythdc1	93	69.710	Pygocentrus_nattereri
ENSCCAG00000035754	YTHDC1	100	95.264	ENSRNOG00000001996	Ythdc1	100	95.264	Rattus_norvegicus
ENSCCAG00000035754	YTHDC1	99	97.257	ENSRBIG00000028279	YTHDC1	99	97.257	Rhinopithecus_bieti
ENSCCAG00000035754	YTHDC1	100	99.451	ENSRROG00000035028	YTHDC1	100	99.451	Rhinopithecus_roxellana
ENSCCAG00000035754	YTHDC1	100	99.718	ENSSBOG00000022353	YTHDC1	100	99.718	Saimiri_boliviensis_boliviensis
ENSCCAG00000035754	YTHDC1	93	88.393	ENSSHAG00000002538	YTHDC1	91	88.688	Sarcophilus_harrisii
ENSCCAG00000035754	YTHDC1	93	69.186	ENSSFOG00015003298	ythdc1	60	86.019	Scleropages_formosus
ENSCCAG00000035754	YTHDC1	57	60.314	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSCCAG00000035754	YTHDC1	56	61.017	ENSSDUG00000022008	ythdc1	94	57.752	Seriola_dumerili
ENSCCAG00000035754	YTHDC1	56	61.017	ENSSLDG00000007926	ythdc1	94	57.405	Seriola_lalandi_dorsalis
ENSCCAG00000035754	YTHDC1	79	98.097	ENSSARG00000010960	YTHDC1	100	98.097	Sorex_araneus
ENSCCAG00000035754	YTHDC1	93	82.544	ENSSPUG00000009357	YTHDC1	94	84.098	Sphenodon_punctatus
ENSCCAG00000035754	YTHDC1	57	62.385	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSCCAG00000035754	YTHDC1	99	96.819	ENSSSCG00000035505	YTHDC1	100	95.816	Sus_scrofa
ENSCCAG00000035754	YTHDC1	93	86.330	ENSTGUG00000004452	-	92	86.330	Taeniopygia_guttata
ENSCCAG00000035754	YTHDC1	63	65.909	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSCCAG00000035754	YTHDC1	88	60.606	ENSTNIG00000013243	ythdc1	89	66.279	Tetraodon_nigroviridis
ENSCCAG00000035754	YTHDC1	93	87.351	ENSTBEG00000011546	YTHDC1	92	88.095	Tupaia_belangeri
ENSCCAG00000035754	YTHDC1	100	94.118	ENSTTRG00000005083	YTHDC1	100	96.580	Tursiops_truncatus
ENSCCAG00000035754	YTHDC1	94	97.496	ENSUAMG00000010388	YTHDC1	100	97.496	Ursus_americanus
ENSCCAG00000035754	YTHDC1	99	84.379	ENSUMAG00000013668	YTHDC1	98	84.379	Ursus_maritimus
ENSCCAG00000035754	YTHDC1	100	98.023	ENSVPAG00000009040	YTHDC1	100	98.023	Vicugna_pacos
ENSCCAG00000035754	YTHDC1	99	96.438	ENSVVUG00000005387	YTHDC1	100	97.353	Vulpes_vulpes
ENSCCAG00000035754	YTHDC1	92	74.516	ENSXETG00000017960	ythdc1	91	74.069	Xenopus_tropicalis
ENSCCAG00000035754	YTHDC1	50	52.574	ENSXCOG00000000530	ythdc1	79	56.198	Xiphophorus_couchianus
ENSCCAG00000035754	YTHDC1	57	59.545	ENSXMAG00000005196	ythdc1	61	65.138	Xiphophorus_maculatus