EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000035763 (Gene tree)
Gene ID: 108308407
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 12811 bases
Position: chrKV389511.1:26098-38908
Accession: 108308407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000035749	RRM_1	PF00076.22	2.3e-05	1	1
ENSCCAP00000035745	RRM_1	PF00076.22	3.1e-05	1	1
ENSCCAP00000035747	RRM_1	PF00076.22	5.1e-05	1	1
ENSCCAP00000035743	RRM_1	PF00076.22	5.6e-05	1	1
ENSCCAP00000035741	RRM_1	PF00076.22	6.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000053523	RDM1-202	756	-	ENSCCAP00000035743	251 (aa)	-	A0A2K5S5S6
ENSCCAT00000053521	RDM1-201	1190	XM_017534192	ENSCCAP00000035741	284 (aa)	XP_017389681	A0A2K5S5U1
ENSCCAT00000053527	RDM1-204	708	XM_017534194	ENSCCAP00000035747	235 (aa)	XP_017389683	A0A2K5S5S1
ENSCCAT00000053529	RDM1-205	420	-	ENSCCAP00000035749	139 (aa)	-	A0A2K5S5V8
ENSCCAT00000053525	RDM1-203	501	-	ENSCCAP00000035745	166 (aa)	-	A0A2K5S5T9

Gene Model

Click here to download ENSCCAG00000035763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035763	RDM1	100	92.086	ENSG00000278023	RDM1	100	92.086	Homo_sapiens
ENSCCAG00000035763	RDM1	96	45.185	ENSAPOG00000021886	zgc:103564	84	35.931	Acanthochromis_polyacanthus
ENSCCAG00000035763	RDM1	96	44.444	ENSAPEG00000008929	zgc:103564	92	32.937	Amphiprion_percula
ENSCCAG00000035763	RDM1	86	52.632	ENSAPLG00000004384	RDM1	93	53.086	Anas_platyrhynchos
ENSCCAG00000035763	RDM1	95	56.061	ENSACAG00000012989	-	99	46.763	Anolis_carolinensis
ENSCCAG00000035763	RDM1	100	96.403	ENSANAG00000032752	RDM1	100	96.403	Aotus_nancymaae
ENSCCAG00000035763	RDM1	96	87.218	ENSBTAG00000000030	RDM1	96	76.557	Bos_taurus
ENSCCAG00000035763	RDM1	100	95.683	ENSCJAG00000015031	RDM1	100	95.683	Callithrix_jacchus
ENSCCAG00000035763	RDM1	96	76.471	ENSCAFG00000015160	-	100	74.609	Canis_familiaris
ENSCCAG00000035763	RDM1	96	86.466	ENSCHIG00000020607	RDM1	97	77.289	Capra_hircus
ENSCCAG00000035763	RDM1	96	81.203	ENSCPOG00000001495	-	94	70.956	Cavia_porcellus
ENSCCAG00000035763	RDM1	100	92.086	ENSCATG00000044451	RDM1	100	92.086	Cercocebus_atys
ENSCCAG00000035763	RDM1	94	84.962	ENSCSAG00000006209	RDM1	95	85.039	Chlorocebus_sabaeus
ENSCCAG00000035763	RDM1	73	69.307	ENSCPBG00000009105	RDM1	92	55.328	Chrysemys_picta_bellii
ENSCCAG00000035763	RDM1	100	90.299	ENSCANG00000041322	RDM1	96	88.235	Colobus_angolensis_palliatus
ENSCCAG00000035763	RDM1	96	79.699	ENSCGRG00001015927	Rdm1	96	71.691	Cricetulus_griseus_chok1gshd
ENSCCAG00000035763	RDM1	94	39.850	ENSCVAG00000001956	zgc:103564	96	34.328	Cyprinodon_variegatus
ENSCCAG00000035763	RDM1	89	77.470	ENSDNOG00000045224	-	90	77.178	Dasypus_novemcinctus
ENSCCAG00000035763	RDM1	86	77.561	ENSEASG00005010554	RDM1	73	77.561	Equus_asinus_asinus
ENSCCAG00000035763	RDM1	96	89.474	ENSECAG00000022182	RDM1	91	80.392	Equus_caballus
ENSCCAG00000035763	RDM1	81	81.188	ENSEEUG00000006127	RDM1	95	69.583	Erinaceus_europaeus
ENSCCAG00000035763	RDM1	100	84.173	ENSFCAG00000043429	RDM1	100	84.173	Felis_catus
ENSCCAG00000035763	RDM1	95	62.121	ENSGALG00000000243	RDM1	95	53.818	Gallus_gallus
ENSCCAG00000035763	RDM1	73	68.317	ENSGAGG00000000293	-	76	54.286	Gopherus_agassizii
ENSCCAG00000035763	RDM1	100	92.806	ENSGGOG00000010584	RDM1	100	92.806	Gorilla_gorilla
ENSCCAG00000035763	RDM1	94	42.424	ENSHCOG00000002518	-	89	36.759	Hippocampus_comes
ENSCCAG00000035763	RDM1	100	86.567	ENSSTOG00000022491	RDM1	96	80.515	Ictidomys_tridecemlineatus
ENSCCAG00000035763	RDM1	96	84.962	ENSLAFG00000029300	RDM1	96	75.912	Loxodonta_africana
ENSCCAG00000035763	RDM1	100	92.086	ENSMFAG00000032968	RDM1	100	92.086	Macaca_fascicularis
ENSCCAG00000035763	RDM1	100	91.791	ENSMMUG00000006847	RDM1	96	89.706	Macaca_mulatta
ENSCCAG00000035763	RDM1	100	92.086	ENSMNEG00000039977	RDM1	100	92.086	Macaca_nemestrina
ENSCCAG00000035763	RDM1	100	91.791	ENSMLEG00000041158	RDM1	96	89.338	Mandrillus_leucophaeus
ENSCCAG00000035763	RDM1	82	60.526	ENSMGAG00000008774	RDM1	94	52.675	Meleagris_gallopavo
ENSCCAG00000035763	RDM1	99	79.104	ENSMAUG00000018559	Rdm1	96	71.429	Mesocricetus_auratus
ENSCCAG00000035763	RDM1	96	90.977	ENSMICG00000038651	RDM1	99	84.120	Microcebus_murinus
ENSCCAG00000035763	RDM1	96	77.444	ENSMOCG00000015095	Rdm1	98	69.485	Microtus_ochrogaster
ENSCCAG00000035763	RDM1	95	71.212	ENSMODG00000011101	RDM1	98	60.886	Monodelphis_domestica
ENSCCAG00000035763	RDM1	96	82.707	MGP_CAROLIEiJ_G0017226	Rdm1	96	72.426	Mus_caroli
ENSCCAG00000035763	RDM1	96	81.955	ENSMUSG00000010362	Rdm1	96	72.059	Mus_musculus
ENSCCAG00000035763	RDM1	99	82.836	MGP_PahariEiJ_G0018356	Rdm1	96	72.059	Mus_pahari
ENSCCAG00000035763	RDM1	96	81.203	MGP_SPRETEiJ_G0018069	Rdm1	96	72.059	Mus_spretus
ENSCCAG00000035763	RDM1	96	88.722	ENSMPUG00000008363	RDM1	96	80.657	Mustela_putorius_furo
ENSCCAG00000035763	RDM1	100	94.030	ENSNLEG00000014173	RDM1	96	91.176	Nomascus_leucogenys
ENSCCAG00000035763	RDM1	95	70.455	ENSMEUG00000015826	RDM1	95	66.949	Notamacropus_eugenii
ENSCCAG00000035763	RDM1	96	84.962	ENSOCUG00000022704	RDM1	97	79.051	Oryctolagus_cuniculus
ENSCCAG00000035763	RDM1	100	84.328	ENSOGAG00000011332	RDM1	96	80.882	Otolemur_garnettii
ENSCCAG00000035763	RDM1	100	92.537	ENSPPAG00000029969	RDM1	96	90.441	Pan_paniscus
ENSCCAG00000035763	RDM1	100	93.525	ENSPTRG00000009031	RDM1	100	93.525	Pan_troglodytes
ENSCCAG00000035763	RDM1	100	92.086	ENSPANG00000022933	RDM1	100	92.086	Papio_anubis
ENSCCAG00000035763	RDM1	96	78.947	ENSPEMG00000018985	Rdm1	96	70.956	Peromyscus_maniculatus_bairdii
ENSCCAG00000035763	RDM1	100	92.537	ENSPPYG00000008198	RDM1	96	90.074	Pongo_abelii
ENSCCAG00000035763	RDM1	100	85.075	ENSPCOG00000017995	RDM1	100	84.892	Propithecus_coquereli
ENSCCAG00000035763	RDM1	96	87.218	ENSPVAG00000001116	RDM1	100	80.478	Pteropus_vampyrus
ENSCCAG00000035763	RDM1	96	81.955	ENSRNOG00000020751	Rdm1	96	72.059	Rattus_norvegicus
ENSCCAG00000035763	RDM1	100	91.045	ENSRBIG00000030000	RDM1	100	90.647	Rhinopithecus_bieti
ENSCCAG00000035763	RDM1	100	91.045	ENSRROG00000035242	RDM1	96	89.338	Rhinopithecus_roxellana
ENSCCAG00000035763	RDM1	95	74.242	ENSSHAG00000013584	RDM1	99	65.809	Sarcophilus_harrisii
ENSCCAG00000035763	RDM1	93	60.465	ENSSPUG00000010941	RDM1	94	51.331	Sphenodon_punctatus
ENSCCAG00000035763	RDM1	94	45.455	ENSSPAG00000011690	-	92	36.187	Stegastes_partitus
ENSCCAG00000035763	RDM1	81	78.571	ENSSSCG00000017574	-	93	70.536	Sus_scrofa
ENSCCAG00000035763	RDM1	81	81.373	ENSTBEG00000010030	RDM1	95	58.333	Tupaia_belangeri
ENSCCAG00000035763	RDM1	96	88.722	ENSUAMG00000027279	RDM1	96	81.250	Ursus_americanus
ENSCCAG00000035763	RDM1	96	88.722	ENSUMAG00000015423	RDM1	94	81.250	Ursus_maritimus