EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000035991 (Gene tree)
Gene ID: 108305186
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 126607 bases
Position: chrKV389487.1:7813080-7939686
Accession: 108305186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000036160	Upf2	PF04050.14	6.7e-33	1	1
ENSCCAP00000036165	Upf2	PF04050.14	1.1e-32	1	1
ENSCCAP00000036165	MIF4G	PF02854.19	7.3e-77	1	3
ENSCCAP00000036165	MIF4G	PF02854.19	7.3e-77	2	3
ENSCCAP00000036165	MIF4G	PF02854.19	7.3e-77	3	3
ENSCCAP00000036160	MIF4G	PF02854.19	4.4e-76	1	3
ENSCCAP00000036160	MIF4G	PF02854.19	4.4e-76	2	3
ENSCCAP00000036160	MIF4G	PF02854.19	4.4e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000053944	UPF2-201	5179	XM_017529743	ENSCCAP00000036160	1209 (aa)	XP_017385232	A0A2K5S700
ENSCCAT00000053949	UPF2-202	3705	-	ENSCCAP00000036165	1234 (aa)	-	A0A2K5S704

Gene Model

Click here to download ENSCCAG00000035991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000035991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000035991	UPF2	100	93.711	ENSG00000151461	UPF2	100	93.711	Homo_sapiens
ENSCCAG00000035991	UPF2	99	74.880	ENSAPOG00000015837	UPF2	100	75.120	Acanthochromis_polyacanthus
ENSCCAG00000035991	UPF2	100	91.424	ENSAMEG00000004586	UPF2	100	91.424	Ailuropoda_melanoleuca
ENSCCAG00000035991	UPF2	99	75.469	ENSACIG00000018078	UPF2	100	75.781	Amphilophus_citrinellus
ENSCCAG00000035991	UPF2	100	75.507	ENSAOCG00000016766	UPF2	100	75.897	Amphiprion_ocellaris
ENSCCAG00000035991	UPF2	100	75.585	ENSAPEG00000019084	UPF2	100	75.975	Amphiprion_percula
ENSCCAG00000035991	UPF2	100	75.661	ENSATEG00000021677	UPF2	99	76.012	Anabas_testudineus
ENSCCAG00000035991	UPF2	100	81.211	ENSAPLG00000010287	UPF2	90	86.063	Anas_platyrhynchos
ENSCCAG00000035991	UPF2	100	84.579	ENSACAG00000009259	UPF2	100	84.579	Anolis_carolinensis
ENSCCAG00000035991	UPF2	99	84.107	ENSANAG00000028451	UPF2	99	80.409	Aotus_nancymaae
ENSCCAG00000035991	UPF2	100	74.922	ENSACLG00000012696	UPF2	100	76.168	Astatotilapia_calliptera
ENSCCAG00000035991	UPF2	99	76.128	ENSAMXG00000013700	UPF2	99	76.369	Astyanax_mexicanus
ENSCCAG00000035991	UPF2	100	91.588	ENSBTAG00000000288	UPF2	100	91.267	Bos_taurus
ENSCCAG00000035991	UPF2	61	33.333	WBGene00004881	smg-3	65	32.418	Caenorhabditis_elegans
ENSCCAG00000035991	UPF2	100	93.942	ENSCJAG00000020685	UPF2	100	93.942	Callithrix_jacchus
ENSCCAG00000035991	UPF2	100	91.424	ENSCAFG00000004839	UPF2	100	91.424	Canis_familiaris
ENSCCAG00000035991	UPF2	99	90.736	ENSCAFG00020005882	UPF2	100	89.936	Canis_lupus_dingo
ENSCCAG00000035991	UPF2	100	91.667	ENSCHIG00000020359	UPF2	100	91.345	Capra_hircus
ENSCCAG00000035991	UPF2	93	100.000	ENSTSYG00000000935	UPF2	97	100.000	Carlito_syrichta
ENSCCAG00000035991	UPF2	91	84.229	ENSCAPG00000016658	UPF2	100	84.033	Cavia_aperea
ENSCCAG00000035991	UPF2	99	89.929	ENSCPOG00000008809	UPF2	99	88.343	Cavia_porcellus
ENSCCAG00000035991	UPF2	100	93.711	ENSCATG00000032679	UPF2	100	93.711	Cercocebus_atys
ENSCCAG00000035991	UPF2	100	91.660	ENSCLAG00000011434	UPF2	100	91.660	Chinchilla_lanigera
ENSCCAG00000035991	UPF2	100	93.789	ENSCSAG00000013372	UPF2	100	93.789	Chlorocebus_sabaeus
ENSCCAG00000035991	UPF2	86	96.911	ENSCHOG00000000422	UPF2	89	95.367	Choloepus_hoffmanni
ENSCCAG00000035991	UPF2	99	85.964	ENSCPBG00000027823	UPF2	100	86.043	Chrysemys_picta_bellii
ENSCCAG00000035991	UPF2	79	45.919	ENSCSAVG00000007772	-	79	46.701	Ciona_savignyi
ENSCCAG00000035991	UPF2	99	89.669	ENSCANG00000040396	UPF2	100	87.826	Colobus_angolensis_palliatus
ENSCCAG00000035991	UPF2	100	90.795	ENSCGRG00001019347	Upf2	100	89.614	Cricetulus_griseus_chok1gshd
ENSCCAG00000035991	UPF2	100	90.795	ENSCGRG00000017993	Upf2	100	89.614	Cricetulus_griseus_crigri
ENSCCAG00000035991	UPF2	90	80.484	ENSCSEG00000003520	UPF2	95	78.306	Cynoglossus_semilaevis
ENSCCAG00000035991	UPF2	99	75.177	ENSCVAG00000006167	UPF2	100	75.491	Cyprinodon_variegatus
ENSCCAG00000035991	UPF2	100	92.138	ENSDNOG00000018160	UPF2	100	92.138	Dasypus_novemcinctus
ENSCCAG00000035991	UPF2	100	90.566	ENSDORG00000002478	Upf2	100	90.480	Dipodomys_ordii
ENSCCAG00000035991	UPF2	89	35.187	FBgn0029992	Upf2	82	43.860	Drosophila_melanogaster
ENSCCAG00000035991	UPF2	76	100.000	ENSETEG00000011583	-	67	100.000	Echinops_telfairi
ENSCCAG00000035991	UPF2	65	72.483	ENSEBUG00000012448	-	86	72.483	Eptatretus_burgeri
ENSCCAG00000035991	UPF2	100	92.368	ENSEASG00005019274	UPF2	100	99.074	Equus_asinus_asinus
ENSCCAG00000035991	UPF2	100	92.447	ENSECAG00000017022	UPF2	100	92.447	Equus_caballus
ENSCCAG00000035991	UPF2	86	94.888	ENSEEUG00000007819	UPF2	82	94.888	Erinaceus_europaeus
ENSCCAG00000035991	UPF2	99	84.886	ENSELUG00000012014	UPF2	96	84.082	Esox_lucius
ENSCCAG00000035991	UPF2	100	99.448	ENSFCAG00000005785	UPF2	93	99.448	Felis_catus
ENSCCAG00000035991	UPF2	100	87.097	ENSFALG00000001889	UPF2	98	85.681	Ficedula_albicollis
ENSCCAG00000035991	UPF2	100	91.188	ENSFDAG00000014348	UPF2	100	91.503	Fukomys_damarensis
ENSCCAG00000035991	UPF2	99	75.334	ENSFHEG00000009826	UPF2	100	75.767	Fundulus_heteroclitus
ENSCCAG00000035991	UPF2	90	78.325	ENSGMOG00000005557	UPF2	100	75.098	Gadus_morhua
ENSCCAG00000035991	UPF2	100	87.264	ENSGALG00000033772	UPF2	100	85.849	Gallus_gallus
ENSCCAG00000035991	UPF2	100	83.573	ENSGAFG00000020867	UPF2	96	82.546	Gambusia_affinis
ENSCCAG00000035991	UPF2	91	77.845	ENSGACG00000001080	UPF2	100	75.859	Gasterosteus_aculeatus
ENSCCAG00000035991	UPF2	100	85.445	ENSGAGG00000002700	UPF2	100	85.445	Gopherus_agassizii
ENSCCAG00000035991	UPF2	100	93.632	ENSGGOG00000001479	UPF2	100	93.632	Gorilla_gorilla
ENSCCAG00000035991	UPF2	100	74.766	ENSHBUG00000004249	UPF2	100	76.131	Haplochromis_burtoni
ENSCCAG00000035991	UPF2	99	81.181	ENSHGLG00000003822	-	99	80.315	Heterocephalus_glaber_female
ENSCCAG00000035991	UPF2	100	91.739	ENSHGLG00000015176	-	100	91.739	Heterocephalus_glaber_female
ENSCCAG00000035991	UPF2	99	88.889	ENSHGLG00100010036	UPF2	100	88.968	Heterocephalus_glaber_male
ENSCCAG00000035991	UPF2	100	74.747	ENSHCOG00000004025	UPF2	99	73.582	Hippocampus_comes
ENSCCAG00000035991	UPF2	100	76.443	ENSIPUG00000015524	UPF2	100	75.644	Ictalurus_punctatus
ENSCCAG00000035991	UPF2	100	90.959	ENSSTOG00000013075	UPF2	100	90.873	Ictidomys_tridecemlineatus
ENSCCAG00000035991	UPF2	100	89.544	ENSJJAG00000004913	Upf2	100	89.378	Jaculus_jaculus
ENSCCAG00000035991	UPF2	99	82.927	ENSKMAG00000001071	UPF2	96	82.822	Kryptolebias_marmoratus
ENSCCAG00000035991	UPF2	79	74.096	ENSLBEG00000000728	-	93	76.667	Labrus_bergylta
ENSCCAG00000035991	UPF2	100	74.747	ENSLBEG00000016394	-	100	78.631	Labrus_bergylta
ENSCCAG00000035991	UPF2	99	80.690	ENSLACG00000015945	UPF2	97	80.328	Latimeria_chalumnae
ENSCCAG00000035991	UPF2	99	79.275	ENSLOCG00000015698	UPF2	100	79.196	Lepisosteus_oculatus
ENSCCAG00000035991	UPF2	100	93.632	ENSMFAG00000043865	UPF2	100	93.632	Macaca_fascicularis
ENSCCAG00000035991	UPF2	100	93.632	ENSMMUG00000008241	UPF2	100	93.632	Macaca_mulatta
ENSCCAG00000035991	UPF2	80	91.805	ENSMNEG00000008062	UPF2	100	91.805	Macaca_nemestrina
ENSCCAG00000035991	UPF2	100	94.312	ENSMLEG00000036120	UPF2	100	94.312	Mandrillus_leucophaeus
ENSCCAG00000035991	UPF2	100	75.117	ENSMAMG00000018276	UPF2	100	75.701	Mastacembelus_armatus
ENSCCAG00000035991	UPF2	100	74.922	ENSMZEG00005021595	UPF2	100	76.168	Maylandia_zebra
ENSCCAG00000035991	UPF2	99	86.625	ENSMGAG00000004573	UPF2	99	85.208	Meleagris_gallopavo
ENSCCAG00000035991	UPF2	100	88.434	ENSMAUG00000016512	Upf2	100	87.893	Mesocricetus_auratus
ENSCCAG00000035991	UPF2	95	99.490	ENSMICG00000001716	UPF2	99	99.482	Microcebus_murinus
ENSCCAG00000035991	UPF2	100	90.795	ENSMOCG00000008263	Upf2	100	91.109	Microtus_ochrogaster
ENSCCAG00000035991	UPF2	99	74.219	ENSMMOG00000006528	UPF2	100	74.488	Mola_mola
ENSCCAG00000035991	UPF2	100	87.884	ENSMODG00000016794	UPF2	100	87.884	Monodelphis_domestica
ENSCCAG00000035991	UPF2	99	75.215	ENSMALG00000002663	UPF2	100	75.489	Monopterus_albus
ENSCCAG00000035991	UPF2	100	90.401	MGP_CAROLIEiJ_G0023157	Upf2	100	91.965	Mus_caroli
ENSCCAG00000035991	UPF2	100	90.480	ENSMUSG00000043241	Upf2	100	91.431	Mus_musculus
ENSCCAG00000035991	UPF2	100	90.165	MGP_PahariEiJ_G0019217	Upf2	100	91.038	Mus_pahari
ENSCCAG00000035991	UPF2	100	91.745	MGP_SPRETEiJ_G0024075	Upf2	100	91.745	Mus_spretus
ENSCCAG00000035991	UPF2	100	91.424	ENSMPUG00000001064	UPF2	100	91.424	Mustela_putorius_furo
ENSCCAG00000035991	UPF2	99	90.659	ENSMLUG00000000228	UPF2	100	90.259	Myotis_lucifugus
ENSCCAG00000035991	UPF2	100	74.922	ENSNBRG00000013629	UPF2	100	76.168	Neolamprologus_brichardi
ENSCCAG00000035991	UPF2	100	93.632	ENSNLEG00000012058	UPF2	100	93.632	Nomascus_leucogenys
ENSCCAG00000035991	UPF2	56	96.923	ENSMEUG00000002180	-	53	96.923	Notamacropus_eugenii
ENSCCAG00000035991	UPF2	75	100.000	ENSOPRG00000006801	-	76	97.817	Ochotona_princeps
ENSCCAG00000035991	UPF2	100	91.109	ENSODEG00000001290	UPF2	100	91.109	Octodon_degus
ENSCCAG00000035991	UPF2	100	75.000	ENSONIG00000017991	UPF2	100	76.246	Oreochromis_niloticus
ENSCCAG00000035991	UPF2	99	90.752	ENSOCUG00000006230	UPF2	100	90.909	Oryctolagus_cuniculus
ENSCCAG00000035991	UPF2	100	74.883	ENSORLG00000017189	UPF2	100	75.195	Oryzias_latipes
ENSCCAG00000035991	UPF2	100	74.961	ENSORLG00020005969	UPF2	100	75.273	Oryzias_latipes_hni
ENSCCAG00000035991	UPF2	100	74.883	ENSORLG00015005713	UPF2	100	75.195	Oryzias_latipes_hsok
ENSCCAG00000035991	UPF2	99	71.941	ENSOMEG00000023420	UPF2	98	72.244	Oryzias_melastigma
ENSCCAG00000035991	UPF2	100	92.767	ENSOGAG00000005796	UPF2	100	92.767	Otolemur_garnettii
ENSCCAG00000035991	UPF2	100	91.523	ENSOARG00000014587	UPF2	100	91.202	Ovis_aries
ENSCCAG00000035991	UPF2	99	92.265	ENSPPAG00000037953	UPF2	100	90.427	Pan_paniscus
ENSCCAG00000035991	UPF2	100	91.345	ENSPPRG00000000690	UPF2	100	91.345	Panthera_pardus
ENSCCAG00000035991	UPF2	100	91.345	ENSPTIG00000008867	UPF2	100	91.345	Panthera_tigris_altaica
ENSCCAG00000035991	UPF2	100	93.632	ENSPTRG00000002291	UPF2	100	93.632	Pan_troglodytes
ENSCCAG00000035991	UPF2	100	93.632	ENSPANG00000023399	UPF2	100	93.632	Papio_anubis
ENSCCAG00000035991	UPF2	100	75.351	ENSPKIG00000025502	UPF2	100	75.507	Paramormyrops_kingsleyae
ENSCCAG00000035991	UPF2	61	89.510	ENSPSIG00000015158	UPF2	93	89.510	Pelodiscus_sinensis
ENSCCAG00000035991	UPF2	99	72.506	ENSPMGG00000005259	UPF2	100	73.998	Periophthalmus_magnuspinnatus
ENSCCAG00000035991	UPF2	92	91.860	ENSPEMG00000015731	Upf2	99	90.379	Peromyscus_maniculatus_bairdii
ENSCCAG00000035991	UPF2	100	87.569	ENSPCIG00000006656	UPF2	100	87.569	Phascolarctos_cinereus
ENSCCAG00000035991	UPF2	100	73.947	ENSPFOG00000017118	UPF2	100	75.741	Poecilia_formosa
ENSCCAG00000035991	UPF2	100	73.947	ENSPLAG00000005094	UPF2	100	75.741	Poecilia_latipinna
ENSCCAG00000035991	UPF2	100	73.947	ENSPMEG00000017009	UPF2	100	75.741	Poecilia_mexicana
ENSCCAG00000035991	UPF2	99	73.688	ENSPREG00000021880	UPF2	100	75.881	Poecilia_reticulata
ENSCCAG00000035991	UPF2	64	91.507	ENSPPYG00000002089	-	100	91.507	Pongo_abelii
ENSCCAG00000035991	UPF2	89	95.851	ENSPCAG00000000684	UPF2	85	95.851	Procavia_capensis
ENSCCAG00000035991	UPF2	99	89.818	ENSPCOG00000021656	UPF2	100	87.728	Propithecus_coquereli
ENSCCAG00000035991	UPF2	97	98.755	ENSPVAG00000017286	UPF2	92	98.755	Pteropus_vampyrus
ENSCCAG00000035991	UPF2	99	72.465	ENSPNYG00000017096	UPF2	100	73.832	Pundamilia_nyererei
ENSCCAG00000035991	UPF2	100	76.287	ENSPNAG00000009357	UPF2	100	76.755	Pygocentrus_nattereri
ENSCCAG00000035991	UPF2	99	84.537	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSCCAG00000035991	UPF2	99	92.520	ENSRBIG00000037780	UPF2	100	92.520	Rhinopithecus_bieti
ENSCCAG00000035991	UPF2	100	93.553	ENSRROG00000043547	UPF2	100	93.553	Rhinopithecus_roxellana
ENSCCAG00000035991	UPF2	100	93.942	ENSSBOG00000020012	UPF2	100	93.942	Saimiri_boliviensis_boliviensis
ENSCCAG00000035991	UPF2	100	75.292	ENSSFOG00015023788	upf2	100	76.617	Scleropages_formosus
ENSCCAG00000035991	UPF2	90	83.752	ENSSMAG00000007637	UPF2	100	75.214	Scophthalmus_maximus
ENSCCAG00000035991	UPF2	100	75.507	ENSSDUG00000017244	UPF2	100	75.374	Seriola_dumerili
ENSCCAG00000035991	UPF2	99	73.767	ENSSLDG00000016866	UPF2	100	74.393	Seriola_lalandi_dorsalis
ENSCCAG00000035991	UPF2	100	88.758	ENSSARG00000008615	UPF2	100	87.805	Sorex_araneus
ENSCCAG00000035991	UPF2	99	82.677	ENSSPUG00000014544	UPF2	99	82.677	Sphenodon_punctatus
ENSCCAG00000035991	UPF2	67	90.909	ENSSSCG00000011117	-	100	90.909	Sus_scrofa
ENSCCAG00000035991	UPF2	99	87.066	ENSTGUG00000002163	-	100	85.647	Taeniopygia_guttata
ENSCCAG00000035991	UPF2	100	75.000	ENSTRUG00000007519	UPF2	99	75.585	Takifugu_rubripes
ENSCCAG00000035991	UPF2	100	73.795	ENSTNIG00000004453	UPF2	100	73.676	Tetraodon_nigroviridis
ENSCCAG00000035991	UPF2	93	84.687	ENSTBEG00000012679	UPF2	93	84.687	Tupaia_belangeri
ENSCCAG00000035991	UPF2	100	91.975	ENSTTRG00000016388	UPF2	100	91.975	Tursiops_truncatus
ENSCCAG00000035991	UPF2	92	100.000	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSCCAG00000035991	UPF2	100	91.660	ENSUMAG00000012953	UPF2	95	91.660	Ursus_maritimus
ENSCCAG00000035991	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSCCAG00000035991	UPF2	100	91.345	ENSVVUG00000006166	UPF2	100	91.345	Vulpes_vulpes
ENSCCAG00000035991	UPF2	99	78.180	ENSXETG00000033103	UPF2	99	78.103	Xenopus_tropicalis
ENSCCAG00000035991	UPF2	99	83.299	ENSXCOG00000011604	UPF2	96	82.268	Xiphophorus_couchianus
ENSCCAG00000035991	UPF2	100	83.368	ENSXMAG00000017209	UPF2	96	82.341	Xiphophorus_maculatus