EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000036033 (Gene tree)
Gene ID: 108312895
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 32846 bases
Position: chrKV389434.1:4757055-4789900
Accession: 108312895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000036225	zf-C2H2	PF00096.26	6.4e-19	1	2
ENSCCAP00000036225	zf-C2H2	PF00096.26	6.4e-19	2	2
ENSCCAP00000036225	zf-met	PF12874.7	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000054009	PRDM4-201	4232	XM_017541074	ENSCCAP00000036225	801 (aa)	XP_017396563	A0A2K5S767
ENSCCAT00000054010	PRDM4-202	918	-	ENSCCAP00000036226	305 (aa)	-	A0A2K5S765

Gene Model

Click here to download ENSCCAG00000036033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000036033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000036033	PRDM4	100	99.251	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSCCAG00000036033	PRDM4	99	97.372	ENSAMEG00000016174	PRDM4	99	97.372	Ailuropoda_melanoleuca
ENSCCAG00000036033	PRDM4	99	87.343	ENSAPLG00000009846	PRDM4	99	86.717	Anas_platyrhynchos
ENSCCAG00000036033	PRDM4	100	99.750	ENSANAG00000024800	PRDM4	100	99.750	Aotus_nancymaae
ENSCCAG00000036033	PRDM4	100	97.004	ENSBTAG00000012999	PRDM4	100	97.004	Bos_taurus
ENSCCAG00000036033	PRDM4	100	99.126	ENSCJAG00000015261	PRDM4	100	99.126	Callithrix_jacchus
ENSCCAG00000036033	PRDM4	100	97.378	ENSCAFG00000001788	PRDM4	100	97.378	Canis_familiaris
ENSCCAG00000036033	PRDM4	100	97.378	ENSCAFG00020004916	PRDM4	100	97.378	Canis_lupus_dingo
ENSCCAG00000036033	PRDM4	100	96.879	ENSCHIG00000019409	PRDM4	100	96.879	Capra_hircus
ENSCCAG00000036033	PRDM4	100	98.127	ENSTSYG00000009248	PRDM4	100	98.127	Carlito_syrichta
ENSCCAG00000036033	PRDM4	99	90.989	ENSCAPG00000013937	PRDM4	99	90.864	Cavia_aperea
ENSCCAG00000036033	PRDM4	99	90.435	ENSCPOG00000022385	PRDM4	100	90.311	Cavia_porcellus
ENSCCAG00000036033	PRDM4	100	98.876	ENSCATG00000044797	PRDM4	100	98.876	Cercocebus_atys
ENSCCAG00000036033	PRDM4	99	92.786	ENSCLAG00000007545	PRDM4	100	93.159	Chinchilla_lanigera
ENSCCAG00000036033	PRDM4	100	99.126	ENSCSAG00000002896	PRDM4	100	99.126	Chlorocebus_sabaeus
ENSCCAG00000036033	PRDM4	76	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSCCAG00000036033	PRDM4	99	88.331	ENSCPBG00000023187	PRDM4	100	87.955	Chrysemys_picta_bellii
ENSCCAG00000036033	PRDM4	100	99.001	ENSCANG00000021804	PRDM4	100	99.001	Colobus_angolensis_palliatus
ENSCCAG00000036033	PRDM4	99	93.159	ENSCGRG00001015102	-	100	92.786	Cricetulus_griseus_chok1gshd
ENSCCAG00000036033	PRDM4	96	93.161	ENSCGRG00000004044	-	100	92.774	Cricetulus_griseus_crigri
ENSCCAG00000036033	PRDM4	100	96.504	ENSDNOG00000032478	PRDM4	100	96.562	Dasypus_novemcinctus
ENSCCAG00000036033	PRDM4	99	82.183	ENSDORG00000015081	-	100	81.932	Dipodomys_ordii
ENSCCAG00000036033	PRDM4	93	45.787	ENSEBUG00000003775	prdm4	99	46.122	Eptatretus_burgeri
ENSCCAG00000036033	PRDM4	100	97.378	ENSECAG00000015423	PRDM4	100	97.378	Equus_caballus
ENSCCAG00000036033	PRDM4	94	93.209	ENSEEUG00000006569	PRDM4	99	92.810	Erinaceus_europaeus
ENSCCAG00000036033	PRDM4	99	60.389	ENSELUG00000015265	prdm4	93	62.727	Esox_lucius
ENSCCAG00000036033	PRDM4	100	97.878	ENSFCAG00000022478	PRDM4	100	97.878	Felis_catus
ENSCCAG00000036033	PRDM4	99	87.578	ENSFALG00000013342	PRDM4	100	87.077	Ficedula_albicollis
ENSCCAG00000036033	PRDM4	100	86.924	ENSGALG00000012619	PRDM4	100	86.301	Gallus_gallus
ENSCCAG00000036033	PRDM4	99	87.970	ENSGAGG00000002763	PRDM4	95	87.594	Gopherus_agassizii
ENSCCAG00000036033	PRDM4	99	99.125	ENSGGOG00000001244	PRDM4	99	99.125	Gorilla_gorilla
ENSCCAG00000036033	PRDM4	99	93.852	ENSHGLG00000004590	PRDM4	98	93.601	Heterocephalus_glaber_female
ENSCCAG00000036033	PRDM4	99	92.795	ENSHGLG00100007464	PRDM4	100	92.547	Heterocephalus_glaber_male
ENSCCAG00000036033	PRDM4	95	61.269	ENSIPUG00000024162	prdm4	93	61.619	Ictalurus_punctatus
ENSCCAG00000036033	PRDM4	100	96.754	ENSSTOG00000016168	PRDM4	100	96.754	Ictidomys_tridecemlineatus
ENSCCAG00000036033	PRDM4	82	94.086	ENSJJAG00000022448	-	95	94.086	Jaculus_jaculus
ENSCCAG00000036033	PRDM4	99	72.772	ENSLACG00000007452	PRDM4	99	73.020	Latimeria_chalumnae
ENSCCAG00000036033	PRDM4	78	41.953	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSCCAG00000036033	PRDM4	98	96.827	ENSLAFG00000001483	PRDM4	100	96.827	Loxodonta_africana
ENSCCAG00000036033	PRDM4	100	99.251	ENSMFAG00000041862	PRDM4	100	99.251	Macaca_fascicularis
ENSCCAG00000036033	PRDM4	100	99.251	ENSMMUG00000015550	PRDM4	100	99.251	Macaca_mulatta
ENSCCAG00000036033	PRDM4	100	99.001	ENSMNEG00000032319	PRDM4	100	99.001	Macaca_nemestrina
ENSCCAG00000036033	PRDM4	100	99.126	ENSMLEG00000039607	PRDM4	100	99.126	Mandrillus_leucophaeus
ENSCCAG00000036033	PRDM4	99	79.625	ENSMGAG00000012815	PRDM4	100	79.000	Meleagris_gallopavo
ENSCCAG00000036033	PRDM4	100	96.879	ENSMICG00000007807	PRDM4	100	96.879	Microcebus_murinus
ENSCCAG00000036033	PRDM4	99	93.985	ENSMOCG00000000753	Prdm4	99	93.734	Microtus_ochrogaster
ENSCCAG00000036033	PRDM4	99	94.479	ENSMUSG00000035529	Prdm4	100	94.228	Mus_musculus
ENSCCAG00000036033	PRDM4	99	93.852	MGP_PahariEiJ_G0031398	Prdm4	100	93.901	Mus_pahari
ENSCCAG00000036033	PRDM4	99	95.107	MGP_SPRETEiJ_G0016505	Prdm4	100	95.172	Mus_spretus
ENSCCAG00000036033	PRDM4	99	91.272	ENSMPUG00000012238	PRDM4	99	91.272	Mustela_putorius_furo
ENSCCAG00000036033	PRDM4	99	97.118	ENSMLUG00000000767	PRDM4	99	97.118	Myotis_lucifugus
ENSCCAG00000036033	PRDM4	99	95.734	ENSNGAG00000018627	Prdm4	100	95.734	Nannospalax_galili
ENSCCAG00000036033	PRDM4	100	99.126	ENSNLEG00000006748	PRDM4	100	99.126	Nomascus_leucogenys
ENSCCAG00000036033	PRDM4	89	88.581	ENSMEUG00000004495	PRDM4	89	88.581	Notamacropus_eugenii
ENSCCAG00000036033	PRDM4	88	94.643	ENSOPRG00000010192	PRDM4	89	94.643	Ochotona_princeps
ENSCCAG00000036033	PRDM4	99	90.875	ENSODEG00000014750	PRDM4	99	90.750	Octodon_degus
ENSCCAG00000036033	PRDM4	100	90.762	ENSOANG00000005526	PRDM4	100	90.762	Ornithorhynchus_anatinus
ENSCCAG00000036033	PRDM4	93	96.853	ENSOCUG00000012859	PRDM4	96	96.853	Oryctolagus_cuniculus
ENSCCAG00000036033	PRDM4	99	98.118	ENSOGAG00000011945	PRDM4	100	98.118	Otolemur_garnettii
ENSCCAG00000036033	PRDM4	100	96.629	ENSOARG00000017955	PRDM4	100	96.629	Ovis_aries
ENSCCAG00000036033	PRDM4	100	99.251	ENSPPAG00000038438	PRDM4	100	99.251	Pan_paniscus
ENSCCAG00000036033	PRDM4	100	97.878	ENSPPRG00000004144	PRDM4	100	97.878	Panthera_pardus
ENSCCAG00000036033	PRDM4	100	97.878	ENSPTIG00000005847	PRDM4	100	97.878	Panthera_tigris_altaica
ENSCCAG00000036033	PRDM4	100	99.501	ENSPTRG00000005400	PRDM4	100	99.501	Pan_troglodytes
ENSCCAG00000036033	PRDM4	100	99.251	ENSPANG00000022084	PRDM4	100	99.251	Papio_anubis
ENSCCAG00000036033	PRDM4	99	59.691	ENSPKIG00000000875	prdm4	99	60.404	Paramormyrops_kingsleyae
ENSCCAG00000036033	PRDM4	91	81.559	ENSPSIG00000012066	PRDM4	100	81.559	Pelodiscus_sinensis
ENSCCAG00000036033	PRDM4	99	95.609	ENSPEMG00000014598	Prdm4	100	95.609	Peromyscus_maniculatus_bairdii
ENSCCAG00000036033	PRDM4	100	89.055	ENSPCIG00000009471	PRDM4	100	89.055	Phascolarctos_cinereus
ENSCCAG00000036033	PRDM4	100	99.126	ENSPPYG00000004913	PRDM4	100	99.126	Pongo_abelii
ENSCCAG00000036033	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSCCAG00000036033	PRDM4	100	96.879	ENSPCOG00000021060	PRDM4	100	96.879	Propithecus_coquereli
ENSCCAG00000036033	PRDM4	100	96.883	ENSPVAG00000001596	PRDM4	100	96.883	Pteropus_vampyrus
ENSCCAG00000036033	PRDM4	99	93.985	ENSRNOG00000004962	Prdm4	100	93.734	Rattus_norvegicus
ENSCCAG00000036033	PRDM4	100	99.001	ENSRBIG00000035488	PRDM4	100	99.001	Rhinopithecus_bieti
ENSCCAG00000036033	PRDM4	100	99.126	ENSRROG00000012779	PRDM4	100	99.126	Rhinopithecus_roxellana
ENSCCAG00000036033	PRDM4	100	99.625	ENSSBOG00000000403	PRDM4	100	99.625	Saimiri_boliviensis_boliviensis
ENSCCAG00000036033	PRDM4	99	63.670	ENSSFOG00015023358	prdm4	99	63.670	Scleropages_formosus
ENSCCAG00000036033	PRDM4	100	97.129	ENSSSCG00000000160	PRDM4	100	97.129	Sus_scrofa
ENSCCAG00000036033	PRDM4	99	87.719	ENSTGUG00000010962	-	99	87.218	Taeniopygia_guttata
ENSCCAG00000036033	PRDM4	73	89.932	ENSTBEG00000001732	PRDM4	84	89.932	Tupaia_belangeri
ENSCCAG00000036033	PRDM4	100	96.754	ENSTTRG00000011056	PRDM4	100	96.754	Tursiops_truncatus
ENSCCAG00000036033	PRDM4	100	97.753	ENSUAMG00000022796	PRDM4	100	97.753	Ursus_americanus
ENSCCAG00000036033	PRDM4	100	97.753	ENSUMAG00000017231	PRDM4	100	97.753	Ursus_maritimus
ENSCCAG00000036033	PRDM4	99	97.616	ENSVPAG00000002215	PRDM4	100	97.616	Vicugna_pacos
ENSCCAG00000036033	PRDM4	100	97.378	ENSVVUG00000023397	PRDM4	100	97.378	Vulpes_vulpes