EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000036056 (Gene tree)
Gene ID: 108292310
Gene Symbol: -
Alias: -
Full Name: copine 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 42361 bases
Position: chrKV389444.1:6108333-6150693
Accession: 108292310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000036348	RRM_1	PF00076.22	3.4e-29	1	3
ENSCCAP00000036348	RRM_1	PF00076.22	3.4e-29	2	3
ENSCCAP00000036348	RRM_1	PF00076.22	3.4e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000054135	-	2706	-	ENSCCAP00000036348	901 (aa)	-	A0A2K5S7K4
ENSCCAT00000054128	-	2005	XM_017513138	ENSCCAP00000036341	569 (aa)	XP_017368627	A0A2K5S7G7
ENSCCAT00000054146	-	2034	XM_017513129	ENSCCAP00000036359	542 (aa)	XP_017368618	A0A2K5S7J7
ENSCCAT00000054125	-	1797	-	ENSCCAP00000036338	598 (aa)	-	A0A2K5S7J4
ENSCCAT00000054159	-	2679	-	ENSCCAP00000036372	396 (aa)	-	A0A2K5S7K7

Gene Model

Click here to download ENSCCAG00000036056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000036056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000036056	-	90	98.404	ENSCCAG00000035899	-	95	76.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000036056	-	98	94.731	ENSG00000244462	RBM12	96	94.731	Homo_sapiens
ENSCCAG00000036056	-	98	93.138	ENSAMEG00000019189	RBM12	96	92.688	Ailuropoda_melanoleuca
ENSCCAG00000036056	-	98	75.084	ENSACAG00000006330	RBM12	94	74.860	Anolis_carolinensis
ENSCCAG00000036056	-	98	97.306	ENSANAG00000032596	RBM12	93	97.306	Aotus_nancymaae
ENSCCAG00000036056	-	98	90.153	ENSBTAG00000044015	RBM12	96	89.716	Bos_taurus
ENSCCAG00000036056	-	98	92.913	ENSCAFG00000008256	RBM12	93	92.463	Canis_familiaris
ENSCCAG00000036056	-	98	92.463	ENSCAFG00020005650	RBM12	96	92.351	Canis_lupus_dingo
ENSCCAG00000036056	-	98	92.351	ENSCHIG00000024592	RBM12	96	91.901	Capra_hircus
ENSCCAG00000036056	-	98	92.559	ENSTSYG00000030563	RBM12	93	92.785	Carlito_syrichta
ENSCCAG00000036056	-	85	82.625	ENSCAPG00000006176	RBM12	91	91.831	Cavia_aperea
ENSCCAG00000036056	-	98	76.151	ENSCPOG00000035170	RBM12	96	91.831	Cavia_porcellus
ENSCCAG00000036056	-	98	94.731	ENSCATG00000030934	RBM12	94	94.731	Cercocebus_atys
ENSCCAG00000036056	-	98	92.672	ENSCLAG00000017230	RBM12	96	92.672	Chinchilla_lanigera
ENSCCAG00000036056	-	98	94.843	ENSCANG00000030552	RBM12	94	94.843	Colobus_angolensis_palliatus
ENSCCAG00000036056	-	98	85.474	ENSCGRG00001021144	Rbm12	96	85.474	Cricetulus_griseus_chok1gshd
ENSCCAG00000036056	-	98	85.474	ENSCGRG00000012719	Rbm12	96	85.474	Cricetulus_griseus_crigri
ENSCCAG00000036056	-	98	50.447	ENSDARG00000100636	rbm12	50	72.414	Danio_rerio
ENSCCAG00000036056	-	98	70.988	ENSDORG00000000606	-	96	79.114	Dipodomys_ordii
ENSCCAG00000036056	-	98	90.111	ENSDORG00000028509	-	96	91.489	Dipodomys_ordii
ENSCCAG00000036056	-	98	92.576	ENSECAG00000021997	RBM12	96	92.126	Equus_caballus
ENSCCAG00000036056	-	53	87.671	ENSEEUG00000008858	-	52	87.671	Erinaceus_europaeus
ENSCCAG00000036056	-	98	92.013	ENSFDAG00000014663	RBM12	96	92.463	Fukomys_damarensis
ENSCCAG00000036056	-	98	77.027	ENSGALG00000030253	RBM12	95	77.140	Gallus_gallus
ENSCCAG00000036056	-	98	94.731	ENSGGOG00000028500	RBM12	94	94.731	Gorilla_gorilla
ENSCCAG00000036056	-	98	92.351	ENSHGLG00000013208	RBM12	96	92.801	Heterocephalus_glaber_female
ENSCCAG00000036056	-	87	94.983	ENSHGLG00100019158	RBM12	84	94.983	Heterocephalus_glaber_male
ENSCCAG00000036056	-	98	88.864	ENSSTOG00000019739	RBM12	96	88.313	Ictidomys_tridecemlineatus
ENSCCAG00000036056	-	98	91.901	ENSLAFG00000010341	RBM12	96	92.351	Loxodonta_africana
ENSCCAG00000036056	-	98	94.955	ENSMFAG00000032583	RBM12	94	94.955	Macaca_fascicularis
ENSCCAG00000036056	-	98	94.843	ENSMMUG00000020960	CPNE1	96	94.843	Macaca_mulatta
ENSCCAG00000036056	-	98	94.843	ENSMNEG00000045365	RBM12	94	94.843	Macaca_nemestrina
ENSCCAG00000036056	-	98	94.843	ENSMLEG00000032492	RBM12	94	94.843	Mandrillus_leucophaeus
ENSCCAG00000036056	-	98	76.126	ENSMGAG00000001502	RBM12	95	76.941	Meleagris_gallopavo
ENSCCAG00000036056	-	98	86.211	ENSMAUG00000012800	Rbm12	96	85.684	Mesocricetus_auratus
ENSCCAG00000036056	-	77	85.137	ENSMICG00000029540	-	74	84.783	Microcebus_murinus
ENSCCAG00000036056	-	98	92.446	ENSMICG00000032761	-	93	92.559	Microcebus_murinus
ENSCCAG00000036056	-	98	84.503	ENSMOCG00000012950	Rbm12	96	90.318	Microtus_ochrogaster
ENSCCAG00000036056	-	98	83.540	ENSMODG00000001591	RBM12	93	83.202	Monodelphis_domestica
ENSCCAG00000036056	-	98	75.615	MGP_CAROLIEiJ_G0024551	Rbm12	96	89.717	Mus_caroli
ENSCCAG00000036056	-	98	84.139	ENSMUSG00000089824	Rbm12	96	90.166	Mus_musculus
ENSCCAG00000036056	-	98	76.058	MGP_PahariEiJ_G0025996	Rbm12	96	90.772	Mus_pahari
ENSCCAG00000036056	-	71	92.031	MGP_SPRETEiJ_G0025473	Rbm12	96	89.568	Mus_spretus
ENSCCAG00000036056	-	98	92.463	ENSMPUG00000017789	-	96	92.013	Mustela_putorius_furo
ENSCCAG00000036056	-	98	92.013	ENSMLUG00000011217	RBM12	93	91.564	Myotis_lucifugus
ENSCCAG00000036056	-	98	86.239	ENSNGAG00000015846	Rbm12	96	85.819	Nannospalax_galili
ENSCCAG00000036056	-	98	94.395	ENSNLEG00000010268	RBM12	94	94.395	Nomascus_leucogenys
ENSCCAG00000036056	-	98	82.976	ENSMEUG00000007621	RBM12	73	81.739	Notamacropus_eugenii
ENSCCAG00000036056	-	98	89.878	ENSOPRG00000005687	RBM12	96	90.323	Ochotona_princeps
ENSCCAG00000036056	-	98	86.581	ENSODEG00000013870	RBM12	96	86.368	Octodon_degus
ENSCCAG00000036056	-	98	94.731	ENSPPAG00000040719	RBM12	94	94.731	Pan_paniscus
ENSCCAG00000036056	-	98	94.731	ENSPTRG00000013446	RBM12	94	94.731	Pan_troglodytes
ENSCCAG00000036056	-	98	94.731	ENSPTRG00000040708	-	94	94.731	Pan_troglodytes
ENSCCAG00000036056	-	98	94.843	ENSPANG00000020003	CPNE1	94	94.843	Papio_anubis
ENSCCAG00000036056	-	87	84.262	ENSPSIG00000007369	RBM12	91	84.173	Pelodiscus_sinensis
ENSCCAG00000036056	-	98	77.490	ENSPEMG00000017769	Rbm12	96	79.751	Peromyscus_maniculatus_bairdii
ENSCCAG00000036056	-	57	63.366	ENSPFOG00000023551	rbm12	84	78.873	Poecilia_formosa
ENSCCAG00000036056	-	98	95.749	ENSPPYG00000010960	RBM12	96	95.749	Pongo_abelii
ENSCCAG00000036056	-	98	91.094	ENSPCAG00000008653	RBM12	96	90.192	Procavia_capensis
ENSCCAG00000036056	-	98	93.042	ENSPCOG00000023724	RBM12	93	93.378	Propithecus_coquereli
ENSCCAG00000036056	-	98	91.676	ENSPVAG00000014937	RBM12	96	92.013	Pteropus_vampyrus
ENSCCAG00000036056	-	98	90.469	ENSRNOG00000049913	LOC100910990	93	90.469	Rattus_norvegicus
ENSCCAG00000036056	-	98	90.469	ENSRNOG00000019723	Rbm12	93	90.469	Rattus_norvegicus
ENSCCAG00000036056	-	98	95.067	ENSRBIG00000042965	RBM12	94	95.067	Rhinopithecus_bieti
ENSCCAG00000036056	-	98	95.067	ENSRROG00000037485	RBM12	94	95.067	Rhinopithecus_roxellana
ENSCCAG00000036056	-	98	97.419	ENSSBOG00000027633	RBM12	93	97.419	Saimiri_boliviensis_boliviensis
ENSCCAG00000036056	-	98	83.766	ENSSHAG00000018585	RBM12	95	83.427	Sarcophilus_harrisii
ENSCCAG00000036056	-	98	92.394	ENSSSCG00000036156	RBM12	96	91.946	Sus_scrofa
ENSCCAG00000036056	-	98	77.678	ENSTGUG00000003002	RBM12	95	77.001	Taeniopygia_guttata
ENSCCAG00000036056	-	98	92.463	ENSTTRG00000017035	RBM12	96	92.013	Tursiops_truncatus
ENSCCAG00000036056	-	98	91.226	ENSUAMG00000010430	RBM12	96	92.238	Ursus_americanus
ENSCCAG00000036056	-	89	100.000	ENSVPAG00000003812	RBM12	86	100.000	Vicugna_pacos
ENSCCAG00000036056	-	98	57.714	ENSXETG00000033541	RBM12	72	55.988	Xenopus_tropicalis