EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000036178 (Gene tree)
Gene ID: 108305448
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 198775 bases
Position: chrKV389489.1:2303944-2502718
Accession: 108305448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000036649	ResIII	PF04851.15	7.6e-06	1	1
ENSCCAP00000036652	BRK	PF07533.16	1e-31	1	2
ENSCCAP00000036652	BRK	PF07533.16	1e-31	2	2
ENSCCAP00000036649	BRK	PF07533.16	1.1e-30	1	2
ENSCCAP00000036649	BRK	PF07533.16	1.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000054438	CHD9-202	2895	-	ENSCCAP00000036652	964 (aa)	-	A0A2K5S8D9
ENSCCAT00000054436	CHD9-201	11554	XM_017530098	ENSCCAP00000036649	2882 (aa)	XP_017385587	A0A2K5S8D3

Gene Model

Click here to download ENSCCAG00000036178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000036178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000036178	CHD9	91	44.872	ENSCCAG00000036828	CHD6	99	71.743
ENSCCAG00000036178	CHD9	85	70.474	ENSCCAG00000025831	CHD7	95	53.881
ENSCCAG00000036178	CHD9	74	56.933	ENSCCAG00000020467	CHD8	81	68.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000036178	CHD9	100	98.535	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSCCAG00000036178	CHD9	93	70.714	ENSAPOG00000023034	chd9	66	75.104	Acanthochromis_polyacanthus
ENSCCAG00000036178	CHD9	100	96.703	ENSAMEG00000016232	CHD9	100	95.627	Ailuropoda_melanoleuca
ENSCCAG00000036178	CHD9	92	71.886	ENSACIG00000004097	chd9	73	61.400	Amphilophus_citrinellus
ENSCCAG00000036178	CHD9	93	70.318	ENSAOCG00000005487	chd9	67	75.164	Amphiprion_ocellaris
ENSCCAG00000036178	CHD9	93	71.071	ENSAPEG00000009859	chd9	99	61.163	Amphiprion_percula
ENSCCAG00000036178	CHD9	91	71.786	ENSATEG00000002748	chd9	99	62.167	Anabas_testudineus
ENSCCAG00000036178	CHD9	98	91.941	ENSAPLG00000002826	CHD9	74	85.641	Anas_platyrhynchos
ENSCCAG00000036178	CHD9	98	89.011	ENSACAG00000016150	CHD9	98	81.622	Anolis_carolinensis
ENSCCAG00000036178	CHD9	100	98.963	ENSANAG00000015630	CHD9	100	98.963	Aotus_nancymaae
ENSCCAG00000036178	CHD9	92	69.825	ENSACLG00000016899	chd9	99	61.726	Astatotilapia_calliptera
ENSCCAG00000036178	CHD9	98	70.175	ENSAMXG00000005652	chd9	68	74.611	Astyanax_mexicanus
ENSCCAG00000036178	CHD9	100	97.802	ENSBTAG00000002287	CHD9	100	95.773	Bos_taurus
ENSCCAG00000036178	CHD9	100	99.267	ENSCJAG00000001573	CHD9	100	99.267	Callithrix_jacchus
ENSCCAG00000036178	CHD9	100	97.436	ENSCAFG00000009699	CHD9	100	95.727	Canis_familiaris
ENSCCAG00000036178	CHD9	100	97.436	ENSCAFG00020002879	CHD9	100	97.436	Canis_lupus_dingo
ENSCCAG00000036178	CHD9	100	97.070	ENSTSYG00000007693	CHD9	100	97.070	Carlito_syrichta
ENSCCAG00000036178	CHD9	82	96.774	ENSCAPG00000011604	CHD9	81	79.933	Cavia_aperea
ENSCCAG00000036178	CHD9	100	96.337	ENSCPOG00000036544	CHD9	100	91.247	Cavia_porcellus
ENSCCAG00000036178	CHD9	100	99.267	ENSCATG00000036753	CHD9	100	99.267	Cercocebus_atys
ENSCCAG00000036178	CHD9	98	97.802	ENSCLAG00000007137	CHD9	99	97.572	Chinchilla_lanigera
ENSCCAG00000036178	CHD9	100	99.267	ENSCSAG00000005311	CHD9	100	97.622	Chlorocebus_sabaeus
ENSCCAG00000036178	CHD9	73	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSCCAG00000036178	CHD9	98	86.813	ENSCPBG00000012459	CHD9	99	91.402	Chrysemys_picta_bellii
ENSCCAG00000036178	CHD9	100	99.267	ENSCANG00000030349	CHD9	100	99.267	Colobus_angolensis_palliatus
ENSCCAG00000036178	CHD9	98	95.604	ENSCGRG00001016150	Chd9	99	91.316	Cricetulus_griseus_chok1gshd
ENSCCAG00000036178	CHD9	98	95.604	ENSCGRG00000012850	Chd9	99	96.416	Cricetulus_griseus_crigri
ENSCCAG00000036178	CHD9	93	68.512	ENSCSEG00000009209	chd9	67	72.305	Cynoglossus_semilaevis
ENSCCAG00000036178	CHD9	91	70.280	ENSCVAG00000016195	chd9	73	62.449	Cyprinodon_variegatus
ENSCCAG00000036178	CHD9	97	69.014	ENSDARG00000074498	chd9	68	73.618	Danio_rerio
ENSCCAG00000036178	CHD9	100	94.505	ENSDNOG00000006045	CHD9	100	94.433	Dasypus_novemcinctus
ENSCCAG00000036178	CHD9	100	94.505	ENSDORG00000008523	-	100	94.650	Dipodomys_ordii
ENSCCAG00000036178	CHD9	92	100.000	ENSETEG00000009565	CHD9	94	96.842	Echinops_telfairi
ENSCCAG00000036178	CHD9	98	97.070	ENSEASG00005014832	CHD9	100	94.935	Equus_asinus_asinus
ENSCCAG00000036178	CHD9	100	97.070	ENSECAG00000011505	CHD9	100	95.419	Equus_caballus
ENSCCAG00000036178	CHD9	83	97.238	ENSEEUG00000014515	CHD9	86	97.238	Erinaceus_europaeus
ENSCCAG00000036178	CHD9	94	72.281	ENSELUG00000006031	chd9	97	67.603	Esox_lucius
ENSCCAG00000036178	CHD9	100	97.070	ENSFCAG00000022534	CHD9	100	97.070	Felis_catus
ENSCCAG00000036178	CHD9	98	91.575	ENSFALG00000013276	CHD9	99	86.756	Ficedula_albicollis
ENSCCAG00000036178	CHD9	100	97.436	ENSFDAG00000021037	CHD9	100	94.590	Fukomys_damarensis
ENSCCAG00000036178	CHD9	91	69.149	ENSFHEG00000006068	chd9	68	74.701	Fundulus_heteroclitus
ENSCCAG00000036178	CHD9	82	69.416	ENSGMOG00000006040	chd9	81	76.934	Gadus_morhua
ENSCCAG00000036178	CHD9	96	84.474	ENSGALG00000039178	CHD9	98	84.449	Gallus_gallus
ENSCCAG00000036178	CHD9	93	69.474	ENSGAFG00000010014	chd9	99	60.138	Gambusia_affinis
ENSCCAG00000036178	CHD9	98	68.182	ENSGACG00000016694	chd9	97	74.334	Gasterosteus_aculeatus
ENSCCAG00000036178	CHD9	98	83.457	ENSGAGG00000001048	-	98	87.179	Gopherus_agassizii
ENSCCAG00000036178	CHD9	100	98.901	ENSGGOG00000014816	CHD9	100	98.901	Gorilla_gorilla
ENSCCAG00000036178	CHD9	92	70.423	ENSHBUG00000023322	chd9	96	70.526	Haplochromis_burtoni
ENSCCAG00000036178	CHD9	100	97.436	ENSHGLG00000014938	CHD9	99	98.035	Heterocephalus_glaber_female
ENSCCAG00000036178	CHD9	100	91.606	ENSHGLG00100007620	-	100	92.674	Heterocephalus_glaber_male
ENSCCAG00000036178	CHD9	91	69.204	ENSHCOG00000000937	chd9	69	73.270	Hippocampus_comes
ENSCCAG00000036178	CHD9	97	73.358	ENSIPUG00000016448	chd9	97	74.453	Ictalurus_punctatus
ENSCCAG00000036178	CHD9	100	96.337	ENSSTOG00000022273	CHD9	99	98.497	Ictidomys_tridecemlineatus
ENSCCAG00000036178	CHD9	100	96.337	ENSJJAG00000015741	-	100	93.744	Jaculus_jaculus
ENSCCAG00000036178	CHD9	92	71.631	ENSKMAG00000016784	chd9	66	74.821	Kryptolebias_marmoratus
ENSCCAG00000036178	CHD9	91	69.965	ENSLBEG00000012077	chd9	66	74.184	Labrus_bergylta
ENSCCAG00000036178	CHD9	98	73.412	ENSLACG00000005557	CHD9	73	71.952	Latimeria_chalumnae
ENSCCAG00000036178	CHD9	98	75.986	ENSLOCG00000007225	chd9	99	73.522	Lepisosteus_oculatus
ENSCCAG00000036178	CHD9	100	95.604	ENSLAFG00000015374	CHD9	100	94.695	Loxodonta_africana
ENSCCAG00000036178	CHD9	100	99.267	ENSMFAG00000041354	CHD9	100	99.267	Macaca_fascicularis
ENSCCAG00000036178	CHD9	100	99.267	ENSMMUG00000016310	CHD9	100	99.267	Macaca_mulatta
ENSCCAG00000036178	CHD9	100	98.901	ENSMNEG00000031494	CHD9	100	97.657	Macaca_nemestrina
ENSCCAG00000036178	CHD9	100	99.267	ENSMLEG00000043219	CHD9	100	99.267	Mandrillus_leucophaeus
ENSCCAG00000036178	CHD9	91	69.965	ENSMAMG00000003909	chd9	73	62.701	Mastacembelus_armatus
ENSCCAG00000036178	CHD9	92	70.423	ENSMZEG00005006581	chd9	67	75.598	Maylandia_zebra
ENSCCAG00000036178	CHD9	98	92.308	ENSMGAG00000004642	CHD9	72	80.605	Meleagris_gallopavo
ENSCCAG00000036178	CHD9	95	91.323	ENSMAUG00000000526	-	98	96.000	Mesocricetus_auratus
ENSCCAG00000036178	CHD9	100	97.020	ENSMICG00000016679	CHD9	100	97.020	Microcebus_murinus
ENSCCAG00000036178	CHD9	98	92.471	ENSMOCG00000010691	-	98	95.238	Microtus_ochrogaster
ENSCCAG00000036178	CHD9	91	71.025	ENSMMOG00000016406	chd9	74	63.182	Mola_mola
ENSCCAG00000036178	CHD9	98	83.916	ENSMODG00000013142	-	99	91.800	Monodelphis_domestica
ENSCCAG00000036178	CHD9	92	64.360	ENSMALG00000013306	chd9	73	62.586	Monopterus_albus
ENSCCAG00000036178	CHD9	98	94.139	MGP_CAROLIEiJ_G0031364	Chd9	99	90.506	Mus_caroli
ENSCCAG00000036178	CHD9	98	93.773	ENSMUSG00000056608	Chd9	99	95.376	Mus_musculus
ENSCCAG00000036178	CHD9	98	94.139	MGP_PahariEiJ_G0022964	Chd9	99	88.459	Mus_pahari
ENSCCAG00000036178	CHD9	98	93.407	MGP_SPRETEiJ_G0032483	Chd9	99	90.154	Mus_spretus
ENSCCAG00000036178	CHD9	100	97.070	ENSMPUG00000003285	CHD9	100	94.555	Mustela_putorius_furo
ENSCCAG00000036178	CHD9	100	97.436	ENSMLUG00000004456	CHD9	100	93.864	Myotis_lucifugus
ENSCCAG00000036178	CHD9	100	91.813	ENSNGAG00000015820	-	100	95.971	Nannospalax_galili
ENSCCAG00000036178	CHD9	92	71.174	ENSNBRG00000009423	chd9	99	60.351	Neolamprologus_brichardi
ENSCCAG00000036178	CHD9	90	97.660	ENSNLEG00000001026	CHD9	100	97.660	Nomascus_leucogenys
ENSCCAG00000036178	CHD9	76	96.078	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSCCAG00000036178	CHD9	87	100.000	ENSOPRG00000011168	CHD9	85	97.143	Ochotona_princeps
ENSCCAG00000036178	CHD9	98	95.985	ENSODEG00000004466	CHD9	99	93.648	Octodon_degus
ENSCCAG00000036178	CHD9	93	70.070	ENSONIG00000002816	chd9	87	63.047	Oreochromis_niloticus
ENSCCAG00000036178	CHD9	100	93.091	ENSOANG00000013401	CHD9	100	86.777	Ornithorhynchus_anatinus
ENSCCAG00000036178	CHD9	100	96.337	ENSOCUG00000001016	CHD9	99	96.523	Oryctolagus_cuniculus
ENSCCAG00000036178	CHD9	92	70.732	ENSORLG00000013810	chd9	94	68.968	Oryzias_latipes
ENSCCAG00000036178	CHD9	92	73.646	ENSORLG00020020665	chd9	75	63.323	Oryzias_latipes_hni
ENSCCAG00000036178	CHD9	92	70.732	ENSORLG00015019126	chd9	96	60.771	Oryzias_latipes_hsok
ENSCCAG00000036178	CHD9	100	96.703	ENSOGAG00000002110	CHD9	100	95.109	Otolemur_garnettii
ENSCCAG00000036178	CHD9	100	96.014	ENSOARG00000017664	CHD9	100	94.184	Ovis_aries
ENSCCAG00000036178	CHD9	100	98.901	ENSPPAG00000039388	-	100	97.012	Pan_paniscus
ENSCCAG00000036178	CHD9	100	96.703	ENSPPRG00000004801	CHD9	100	96.703	Panthera_pardus
ENSCCAG00000036178	CHD9	100	94.245	ENSPTIG00000021854	CHD9	100	93.797	Panthera_tigris_altaica
ENSCCAG00000036178	CHD9	100	98.901	ENSPTRG00000008113	CHD9	100	98.901	Pan_troglodytes
ENSCCAG00000036178	CHD9	100	99.267	ENSPANG00000019307	CHD9	100	99.267	Papio_anubis
ENSCCAG00000036178	CHD9	94	70.714	ENSPKIG00000025401	-	71	62.979	Paramormyrops_kingsleyae
ENSCCAG00000036178	CHD9	90	72.302	ENSPKIG00000021876	chd9	68	76.284	Paramormyrops_kingsleyae
ENSCCAG00000036178	CHD9	64	84.757	ENSPSIG00000008099	CHD9	99	84.703	Pelodiscus_sinensis
ENSCCAG00000036178	CHD9	96	60.759	ENSPMGG00000021802	chd9	98	72.500	Periophthalmus_magnuspinnatus
ENSCCAG00000036178	CHD9	98	90.986	ENSPEMG00000021464	-	98	96.337	Peromyscus_maniculatus_bairdii
ENSCCAG00000036178	CHD9	65	60.806	ENSPMAG00000006035	-	72	67.874	Petromyzon_marinus
ENSCCAG00000036178	CHD9	89	86.957	ENSPCIG00000017215	CHD9	97	89.613	Phascolarctos_cinereus
ENSCCAG00000036178	CHD9	93	69.123	ENSPFOG00000015839	chd9	97	61.048	Poecilia_formosa
ENSCCAG00000036178	CHD9	93	69.858	ENSPLAG00000011118	chd9	97	61.113	Poecilia_latipinna
ENSCCAG00000036178	CHD9	93	70.213	ENSPMEG00000015106	chd9	74	61.779	Poecilia_mexicana
ENSCCAG00000036178	CHD9	93	69.858	ENSPREG00000006473	chd9	95	69.742	Poecilia_reticulata
ENSCCAG00000036178	CHD9	100	98.535	ENSPPYG00000007348	CHD9	100	97.792	Pongo_abelii
ENSCCAG00000036178	CHD9	78	96.507	ENSPCAG00000007564	CHD9	86	96.507	Procavia_capensis
ENSCCAG00000036178	CHD9	100	97.436	ENSPCOG00000028433	CHD9	100	97.436	Propithecus_coquereli
ENSCCAG00000036178	CHD9	90	100.000	ENSPVAG00000015617	CHD9	98	90.842	Pteropus_vampyrus
ENSCCAG00000036178	CHD9	94	70.571	ENSPNYG00000010947	chd9	99	61.593	Pundamilia_nyererei
ENSCCAG00000036178	CHD9	92	71.377	ENSPNAG00000024141	chd9	68	74.940	Pygocentrus_nattereri
ENSCCAG00000036178	CHD9	88	92.090	ENSRNOG00000049302	Chd9	100	89.968	Rattus_norvegicus
ENSCCAG00000036178	CHD9	100	99.267	ENSRBIG00000035553	CHD9	100	99.267	Rhinopithecus_bieti
ENSCCAG00000036178	CHD9	100	99.267	ENSRROG00000033278	CHD9	100	99.267	Rhinopithecus_roxellana
ENSCCAG00000036178	CHD9	100	98.859	ENSSBOG00000030240	CHD9	100	98.859	Saimiri_boliviensis_boliviensis
ENSCCAG00000036178	CHD9	98	90.545	ENSSHAG00000002719	CHD9	100	87.173	Sarcophilus_harrisii
ENSCCAG00000036178	CHD9	93	70.714	ENSSFOG00015001327	chd9	67	75.469	Scleropages_formosus
ENSCCAG00000036178	CHD9	93	71.786	ENSSFOG00015020209	chd9	68	76.606	Scleropages_formosus
ENSCCAG00000036178	CHD9	92	68.421	ENSSMAG00000008953	chd9	99	62.396	Scophthalmus_maximus
ENSCCAG00000036178	CHD9	91	71.025	ENSSDUG00000006139	chd9	99	60.124	Seriola_dumerili
ENSCCAG00000036178	CHD9	92	71.886	ENSSLDG00000017818	chd9	99	61.640	Seriola_lalandi_dorsalis
ENSCCAG00000036178	CHD9	100	95.221	ENSSARG00000010632	CHD9	71	97.346	Sorex_araneus
ENSCCAG00000036178	CHD9	98	85.048	ENSSPUG00000017465	-	98	90.110	Sphenodon_punctatus
ENSCCAG00000036178	CHD9	92	69.965	ENSSPAG00000021649	chd9	67	74.940	Stegastes_partitus
ENSCCAG00000036178	CHD9	90	84.474	ENSTGUG00000007476	CHD9	100	84.512	Taeniopygia_guttata
ENSCCAG00000036178	CHD9	97	72.143	ENSTRUG00000009125	chd9	73	62.796	Takifugu_rubripes
ENSCCAG00000036178	CHD9	75	67.958	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSCCAG00000036178	CHD9	64	95.495	ENSTBEG00000016052	-	78	95.495	Tupaia_belangeri
ENSCCAG00000036178	CHD9	90	93.714	ENSTTRG00000012674	CHD9	90	94.174	Tursiops_truncatus
ENSCCAG00000036178	CHD9	100	97.436	ENSUAMG00000022706	CHD9	100	97.436	Ursus_americanus
ENSCCAG00000036178	CHD9	90	92.513	ENSUMAG00000004043	CHD9	99	98.081	Ursus_maritimus
ENSCCAG00000036178	CHD9	98	95.971	ENSVPAG00000001374	CHD9	97	94.372	Vicugna_pacos
ENSCCAG00000036178	CHD9	100	97.436	ENSVVUG00000019435	CHD9	100	95.796	Vulpes_vulpes
ENSCCAG00000036178	CHD9	98	80.952	ENSXETG00000000349	chd9	96	77.011	Xenopus_tropicalis
ENSCCAG00000036178	CHD9	93	69.858	ENSXCOG00000012997	chd9	67	74.895	Xiphophorus_couchianus
ENSCCAG00000036178	CHD9	93	69.474	ENSXMAG00000016192	chd9	97	61.070	Xiphophorus_maculatus