EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCCAG00000036730 (Gene tree)
Gene ID
108301875
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Cebus_capucinus
Status
putative
Strand
Plus strand
Length
49241 bases
Position
chrKV389427.1:1237831-1287071
Accession
108301875
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCCAP00000037873CPSF73-100_CPF11718.81.4e-5411
ENSCCAP00000037860CPSF73-100_CPF11718.81.5e-5411
ENSCCAP00000037873Beta-CaspPF10996.86.9e-3411
ENSCCAP00000037860Beta-CaspPF10996.87e-3411
ENSCCAP00000037873Lactamase_BPF00753.271.6e-1811
ENSCCAP00000037860Lactamase_BPF00753.271.6e-1811
ENSCCAP00000037873RMMBLPF07521.121.8e-2111
ENSCCAP00000037860RMMBLPF07521.121.9e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCCAT00000055665CPSF3-2022028-ENSCCAP00000037873675 (aa)-A0A2K5SC00
ENSCCAT00000055652CPSF3-2012498XM_017525199ENSCCAP00000037860684 (aa)XP_017380688A0A2K5SBU7
Gene Model
Click here to download ENSCCAG00000036730's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000036730's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCCAG00000036730CPSF36540.312ENSCCAG00000026348INTS116561.290
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCCAG00000036730CPSF310099.561ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCCAG00000036730CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSCCAG00000036730CPSF39985.272ENSAPOG00000022087cpsf39885.272Acanthochromis_polyacanthus
ENSCCAG00000036730CPSF310099.269ENSAMEG00000008493CPSF310099.269Ailuropoda_melanoleuca
ENSCCAG00000036730CPSF39382.643ENSACIG00000009846cpsf39982.643Amphilophus_citrinellus
ENSCCAG00000036730CPSF39386.349ENSACIG00000023663CPSF39986.349Amphilophus_citrinellus
ENSCCAG00000036730CPSF39985.272ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSCCAG00000036730CPSF39987.794ENSAOCG00000010077CPSF39887.794Amphiprion_ocellaris
ENSCCAG00000036730CPSF39987.794ENSAPEG00000021167CPSF39887.794Amphiprion_percula
ENSCCAG00000036730CPSF39985.420ENSAPEG00000019526cpsf39786.574Amphiprion_percula
ENSCCAG00000036730CPSF39985.272ENSATEG00000003959cpsf39885.272Anabas_testudineus
ENSCCAG00000036730CPSF39983.088ENSATEG00000014525CPSF39883.088Anabas_testudineus
ENSCCAG00000036730CPSF39995.652ENSAPLG00000006941CPSF39895.652Anas_platyrhynchos
ENSCCAG00000036730CPSF39492.913ENSACAG00000001759CPSF39992.913Anolis_carolinensis
ENSCCAG00000036730CPSF310093.185ENSANAG00000031254CPSF310093.185Aotus_nancymaae
ENSCCAG00000036730CPSF39985.457ENSACLG00000014484cpsf39985.564Astatotilapia_calliptera
ENSCCAG00000036730CPSF39386.190ENSACLG00000018846CPSF39986.190Astatotilapia_calliptera
ENSCCAG00000036730CPSF39988.088ENSAMXG00000004786cpsf39888.088Astyanax_mexicanus
ENSCCAG00000036730CPSF310099.415ENSBTAG00000019735CPSF310099.415Bos_taurus
ENSCCAG00000036730CPSF39159.213WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSCCAG00000036730CPSF310099.854ENSCJAG00000006276CPSF310099.854Callithrix_jacchus
ENSCCAG00000036730CPSF310099.269ENSCAFG00000003375CPSF39599.269Canis_familiaris
ENSCCAG00000036730CPSF390100.000ENSCAFG00020026799CPSF3100100.000Canis_lupus_dingo
ENSCCAG00000036730CPSF310099.415ENSCHIG00000013973CPSF310099.415Capra_hircus
ENSCCAG00000036730CPSF310099.561ENSTSYG00000002967CPSF310099.561Carlito_syrichta
ENSCCAG00000036730CPSF39997.601ENSCAPG00000013851CPSF310097.601Cavia_aperea
ENSCCAG00000036730CPSF310097.661ENSCPOG00000011299CPSF310097.661Cavia_porcellus
ENSCCAG00000036730CPSF310097.226ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSCCAG00000036730CPSF310097.222ENSCLAG00000002727CPSF310097.222Chinchilla_lanigera
ENSCCAG00000036730CPSF310092.105ENSCSAG00000007125CPSF310092.105Chlorocebus_sabaeus
ENSCCAG00000036730CPSF388100.000ENSCHOG00000000180CPSF38572.281Choloepus_hoffmanni
ENSCCAG00000036730CPSF39995.652ENSCPBG00000014074CPSF39995.455Chrysemys_picta_bellii
ENSCCAG00000036730CPSF39968.351ENSCING00000007214-9867.883Ciona_intestinalis
ENSCCAG00000036730CPSF310086.404ENSCANG00000034435CPSF310086.404Colobus_angolensis_palliatus
ENSCCAG00000036730CPSF310098.684ENSCGRG00001013134Cpsf310098.684Cricetulus_griseus_chok1gshd
ENSCCAG00000036730CPSF310098.684ENSCGRG00000018319Cpsf310098.684Cricetulus_griseus_crigri
ENSCCAG00000036730CPSF39986.826ENSCSEG00000002021CPSF39986.399Cynoglossus_semilaevis
ENSCCAG00000036730CPSF39988.088ENSCVAG00000015067CPSF39888.088Cyprinodon_variegatus
ENSCCAG00000036730CPSF39988.824ENSDARG00000027649cpsf39888.824Danio_rerio
ENSCCAG00000036730CPSF310097.518ENSDNOG00000008940CPSF39597.518Dasypus_novemcinctus
ENSCCAG00000036730CPSF39599.078ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSCCAG00000036730CPSF39967.158FBgn0261065Cpsf739867.158Drosophila_melanogaster
ENSCCAG00000036730CPSF39585.714ENSETEG00000003893CPSF310085.714Echinops_telfairi
ENSCCAG00000036730CPSF39978.653ENSEBUG00000009018cpsf39878.797Eptatretus_burgeri
ENSCCAG00000036730CPSF310099.269ENSEASG00005003970CPSF310099.269Equus_asinus_asinus
ENSCCAG00000036730CPSF310099.269ENSECAG00000019911CPSF310099.269Equus_caballus
ENSCCAG00000036730CPSF310083.772ENSEEUG00000015422CPSF310083.772Erinaceus_europaeus
ENSCCAG00000036730CPSF39987.988ENSELUG00000013775cpsf39887.941Esox_lucius
ENSCCAG00000036730CPSF310099.415ENSFCAG00000007852CPSF310099.415Felis_catus
ENSCCAG00000036730CPSF39695.209ENSFALG00000006572CPSF310095.209Ficedula_albicollis
ENSCCAG00000036730CPSF39997.067ENSFDAG00000006317CPSF39997.067Fukomys_damarensis
ENSCCAG00000036730CPSF36068.537ENSFHEG00000012186CPSF39968.537Fundulus_heteroclitus
ENSCCAG00000036730CPSF39984.978ENSFHEG00000014774cpsf39884.978Fundulus_heteroclitus
ENSCCAG00000036730CPSF39986.471ENSGMOG00000003157cpsf39886.471Gadus_morhua
ENSCCAG00000036730CPSF39995.007ENSGALG00000016424CPSF39995.007Gallus_gallus
ENSCCAG00000036730CPSF39987.923ENSGAFG00000008016CPSF39887.923Gambusia_affinis
ENSCCAG00000036730CPSF39382.671ENSGAFG00000019449cpsf39982.671Gambusia_affinis
ENSCCAG00000036730CPSF36993.362ENSGAGG00000025583CPSF39393.362Gopherus_agassizii
ENSCCAG00000036730CPSF310097.282ENSGGOG00000001757CPSF310099.685Gorilla_gorilla
ENSCCAG00000036730CPSF36081.235ENSHBUG00000014332CPSF39981.235Haplochromis_burtoni
ENSCCAG00000036730CPSF39985.586ENSHBUG00000001188cpsf39985.463Haplochromis_burtoni
ENSCCAG00000036730CPSF310096.784ENSHGLG00000000666CPSF39996.784Heterocephalus_glaber_female
ENSCCAG00000036730CPSF310096.784ENSHGLG00100007765CPSF39996.784Heterocephalus_glaber_male
ENSCCAG00000036730CPSF39984.751ENSHCOG00000007251cpsf39984.751Hippocampus_comes
ENSCCAG00000036730CPSF39986.357ENSHCOG00000015957CPSF39786.324Hippocampus_comes
ENSCCAG00000036730CPSF39986.912ENSIPUG00000023488cpsf39886.912Ictalurus_punctatus
ENSCCAG00000036730CPSF310098.684ENSSTOG00000004476CPSF310098.684Ictidomys_tridecemlineatus
ENSCCAG00000036730CPSF310097.515ENSJJAG00000023415Cpsf310097.515Jaculus_jaculus
ENSCCAG00000036730CPSF39987.500ENSKMAG00000007317CPSF39887.500Kryptolebias_marmoratus
ENSCCAG00000036730CPSF39984.683ENSKMAG00000002806cpsf39884.683Kryptolebias_marmoratus
ENSCCAG00000036730CPSF39588.889ENSLBEG00000013492CPSF39888.889Labrus_bergylta
ENSCCAG00000036730CPSF39978.971ENSLBEG00000020569cpsf39478.971Labrus_bergylta
ENSCCAG00000036730CPSF35579.357ENSLBEG00000015018-9979.357Labrus_bergylta
ENSCCAG00000036730CPSF39983.947ENSLACG00000008308CPSF39883.947Latimeria_chalumnae
ENSCCAG00000036730CPSF39988.987ENSLOCG00000016823cpsf39888.987Lepisosteus_oculatus
ENSCCAG00000036730CPSF39998.801ENSLAFG00000009467CPSF310097.500Loxodonta_africana
ENSCCAG00000036730CPSF310099.854ENSMFAG00000001339CPSF310099.854Macaca_fascicularis
ENSCCAG00000036730CPSF39699.845ENSMMUG00000018038CPSF310099.845Macaca_mulatta
ENSCCAG00000036730CPSF310087.135ENSMNEG00000039447CPSF310087.135Macaca_nemestrina
ENSCCAG00000036730CPSF310099.708ENSMLEG00000026825CPSF310099.708Mandrillus_leucophaeus
ENSCCAG00000036730CPSF39985.567ENSMAMG00000003076cpsf39885.567Mastacembelus_armatus
ENSCCAG00000036730CPSF39385.127ENSMAMG00000008835CPSF39985.127Mastacembelus_armatus
ENSCCAG00000036730CPSF39985.586ENSMZEG00005014358cpsf39985.463Maylandia_zebra
ENSCCAG00000036730CPSF39988.382ENSMZEG00005006258CPSF39888.382Maylandia_zebra
ENSCCAG00000036730CPSF39995.052ENSMGAG00000013995CPSF310095.052Meleagris_gallopavo
ENSCCAG00000036730CPSF35696.809ENSMAUG00000000166Cpsf310096.809Mesocricetus_auratus
ENSCCAG00000036730CPSF310093.713ENSMICG00000002363CPSF310093.713Microcebus_murinus
ENSCCAG00000036730CPSF310094.298ENSMOCG00000020067Cpsf310094.298Microtus_ochrogaster
ENSCCAG00000036730CPSF39682.171ENSMMOG00000018212CPSF39882.171Mola_mola
ENSCCAG00000036730CPSF37477.857ENSMMOG00000011923CPSF38477.857Mola_mola
ENSCCAG00000036730CPSF310095.803ENSMODG00000014703CPSF310095.803Monodelphis_domestica
ENSCCAG00000036730CPSF39986.036ENSMALG00000016416cpsf39985.903Monopterus_albus
ENSCCAG00000036730CPSF39483.438ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSCCAG00000036730CPSF310098.392MGP_CAROLIEiJ_G0017640Cpsf310098.392Mus_caroli
ENSCCAG00000036730CPSF310098.392ENSMUSG00000054309Cpsf310098.392Mus_musculus
ENSCCAG00000036730CPSF310098.246MGP_PahariEiJ_G0029397Cpsf310098.246Mus_pahari
ENSCCAG00000036730CPSF310098.392MGP_SPRETEiJ_G0018481Cpsf310098.392Mus_spretus
ENSCCAG00000036730CPSF310098.538ENSMPUG00000013213CPSF310098.538Mustela_putorius_furo
ENSCCAG00000036730CPSF310098.248ENSMLUG00000010636CPSF310098.248Myotis_lucifugus
ENSCCAG00000036730CPSF310098.538ENSNGAG00000019836Cpsf310098.538Nannospalax_galili
ENSCCAG00000036730CPSF39386.190ENSNBRG00000010525CPSF39986.190Neolamprologus_brichardi
ENSCCAG00000036730CPSF39985.135ENSNBRG00000004770cpsf39985.022Neolamprologus_brichardi
ENSCCAG00000036730CPSF310099.854ENSNLEG00000013359CPSF310099.854Nomascus_leucogenys
ENSCCAG00000036730CPSF310065.497ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSCCAG00000036730CPSF310089.474ENSOPRG00000008902CPSF310089.474Ochotona_princeps
ENSCCAG00000036730CPSF310096.930ENSODEG00000003129CPSF310096.930Octodon_degus
ENSCCAG00000036730CPSF39985.736ENSONIG00000018812cpsf39985.609Oreochromis_niloticus
ENSCCAG00000036730CPSF38496.277ENSOANG00000008577CPSF310096.277Ornithorhynchus_anatinus
ENSCCAG00000036730CPSF310098.830ENSOCUG00000003728CPSF310098.830Oryctolagus_cuniculus
ENSCCAG00000036730CPSF39983.483ENSORLG00000018854cpsf39983.407Oryzias_latipes
ENSCCAG00000036730CPSF39983.483ENSORLG00020013331cpsf39983.407Oryzias_latipes_hni
ENSCCAG00000036730CPSF39983.483ENSORLG00015011017cpsf39983.407Oryzias_latipes_hsok
ENSCCAG00000036730CPSF39983.784ENSOMEG00000010647cpsf39483.700Oryzias_melastigma
ENSCCAG00000036730CPSF310089.474ENSOGAG00000001680CPSF310089.474Otolemur_garnettii
ENSCCAG00000036730CPSF310099.415ENSOARG00000015073CPSF310099.415Ovis_aries
ENSCCAG00000036730CPSF310099.708ENSPPAG00000042457CPSF310099.708Pan_paniscus
ENSCCAG00000036730CPSF310099.123ENSPPRG00000016790CPSF310099.123Panthera_pardus
ENSCCAG00000036730CPSF39999.118ENSPTIG00000003920CPSF310099.055Panthera_tigris_altaica
ENSCCAG00000036730CPSF310099.708ENSPTRG00000011638CPSF310099.708Pan_troglodytes
ENSCCAG00000036730CPSF310099.708ENSPANG00000016798CPSF310099.708Papio_anubis
ENSCCAG00000036730CPSF39989.489ENSPKIG00000023646cpsf39989.147Paramormyrops_kingsleyae
ENSCCAG00000036730CPSF39994.603ENSPSIG00000016144CPSF310093.704Pelodiscus_sinensis
ENSCCAG00000036730CPSF38485.340ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSCCAG00000036730CPSF36079.012ENSPMGG00000015311CPSF39979.012Periophthalmus_magnuspinnatus
ENSCCAG00000036730CPSF310098.099ENSPEMG00000017668Cpsf310098.099Peromyscus_maniculatus_bairdii
ENSCCAG00000036730CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSCCAG00000036730CPSF39997.301ENSPCIG00000009823CPSF39897.393Phascolarctos_cinereus
ENSCCAG00000036730CPSF39987.629ENSPFOG00000010418-9887.629Poecilia_formosa
ENSCCAG00000036730CPSF39984.708ENSPFOG00000015922cpsf39984.604Poecilia_formosa
ENSCCAG00000036730CPSF36080.446ENSPLAG00000021300-9980.446Poecilia_latipinna
ENSCCAG00000036730CPSF39984.708ENSPLAG00000000882cpsf39984.604Poecilia_latipinna
ENSCCAG00000036730CPSF39984.858ENSPMEG00000018309cpsf39984.751Poecilia_mexicana
ENSCCAG00000036730CPSF39382.512ENSPREG00000014875cpsf39982.512Poecilia_reticulata
ENSCCAG00000036730CPSF39982.327ENSPREG00000004482CPSF39882.327Poecilia_reticulata
ENSCCAG00000036730CPSF310095.468ENSPPYG00000012666CPSF310095.468Pongo_abelii
ENSCCAG00000036730CPSF39563.594ENSPCAG00000015042CPSF310063.594Procavia_capensis
ENSCCAG00000036730CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSCCAG00000036730CPSF39999.267ENSPVAG00000005324CPSF39999.267Pteropus_vampyrus
ENSCCAG00000036730CPSF38091.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSCCAG00000036730CPSF39985.586ENSPNYG00000004405cpsf39985.463Pundamilia_nyererei
ENSCCAG00000036730CPSF39987.500ENSPNAG00000023060cpsf39887.500Pygocentrus_nattereri
ENSCCAG00000036730CPSF39998.387ENSRNOG00000052418Cpsf39998.387Rattus_norvegicus
ENSCCAG00000036730CPSF310093.713ENSRBIG00000041615CPSF39995.054Rhinopithecus_bieti
ENSCCAG00000036730CPSF310099.708ENSRROG00000033792CPSF310099.708Rhinopithecus_roxellana
ENSCCAG00000036730CPSF39540.805YLR277CYSH19540.805Saccharomyces_cerevisiae
ENSCCAG00000036730CPSF39995.380ENSSBOG00000027263CPSF310093.623Saimiri_boliviensis_boliviensis
ENSCCAG00000036730CPSF310097.515ENSSHAG00000007024CPSF310097.515Sarcophilus_harrisii
ENSCCAG00000036730CPSF39989.640ENSSFOG00015002108cpsf39989.427Scleropages_formosus
ENSCCAG00000036730CPSF39587.500ENSSMAG00000020534CPSF39587.500Scophthalmus_maximus
ENSCCAG00000036730CPSF39987.941ENSSDUG00000018498CPSF39887.941Seriola_dumerili
ENSCCAG00000036730CPSF39985.586ENSSDUG00000002828cpsf39685.463Seriola_dumerili
ENSCCAG00000036730CPSF39987.941ENSSLDG00000005234CPSF39887.941Seriola_lalandi_dorsalis
ENSCCAG00000036730CPSF39985.586ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSCCAG00000036730CPSF310081.140ENSSARG00000005186CPSF310081.140Sorex_araneus
ENSCCAG00000036730CPSF39992.250ENSSPUG00000015525CPSF39792.250Sphenodon_punctatus
ENSCCAG00000036730CPSF39985.420ENSSPAG00000018579cpsf39885.420Stegastes_partitus
ENSCCAG00000036730CPSF39987.647ENSSPAG00000002906CPSF39887.647Stegastes_partitus
ENSCCAG00000036730CPSF39999.122ENSSSCG00000020799CPSF39999.122Sus_scrofa
ENSCCAG00000036730CPSF39995.301ENSTGUG00000013016CPSF39995.301Taeniopygia_guttata
ENSCCAG00000036730CPSF36072.973ENSTRUG00000013905CPSF39972.973Takifugu_rubripes
ENSCCAG00000036730CPSF39984.706ENSTRUG00000007030cpsf39784.706Takifugu_rubripes
ENSCCAG00000036730CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSCCAG00000036730CPSF38897.849ENSTTRG00000000861CPSF38897.849Tursiops_truncatus
ENSCCAG00000036730CPSF39996.188ENSUAMG00000007535CPSF39896.188Ursus_americanus
ENSCCAG00000036730CPSF39699.227ENSUMAG00000003676CPSF310099.227Ursus_maritimus
ENSCCAG00000036730CPSF39495.584ENSVPAG00000008041CPSF310095.584Vicugna_pacos
ENSCCAG00000036730CPSF310099.269ENSVVUG00000002194CPSF310099.269Vulpes_vulpes
ENSCCAG00000036730CPSF39990.015ENSXETG00000008263cpsf39890.015Xenopus_tropicalis
ENSCCAG00000036730CPSF39985.007ENSXCOG00000019695cpsf39984.897Xiphophorus_couchianus
ENSCCAG00000036730CPSF35578.976ENSXCOG00000000957-8778.976Xiphophorus_couchianus
ENSCCAG00000036730CPSF39984.708ENSXMAG00000009784cpsf39984.604Xiphophorus_maculatus
ENSCCAG00000036730CPSF39987.776ENSXMAG00000027291CPSF39887.776Xiphophorus_maculatus

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