EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000036784 (Gene tree)
Gene ID: 108290643
Gene Symbol: TRIM39
Alias: RNF23
Full Name: ribonuclease P/MRP subunit p21
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 20732 bases
Position: chrKV389866.1:696140-716871
Accession: 108290643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000037883	Rpr2	PF04032.16	5.8e-19	1	1
ENSCCAP00000037909	Rpr2	PF04032.16	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000055701	TRIM39-202	1512	-	ENSCCAP00000037909	503 (aa)	-	A0A2K5SBY5
ENSCCAT00000055714	TRIM39-203	3453	XM_017510516	ENSCCAP00000037922	488 (aa)	XP_017366005	A0A2K5SC13
ENSCCAT00000055675	TRIM39-201	1135	XM_017510547	ENSCCAP00000037883	154 (aa)	XP_017366036	A0A2K5SC10
ENSCCAT00000055721	TRIM39-204	1539	-	ENSCCAP00000037929	512 (aa)	-	A0A2K5SC03

Gene Model

Click here to download ENSCCAG00000036784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000036784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000036784	TRIM39	100	99.205	ENSANAG00000032075	TRIM39	100	99.205	Aotus_nancymaae
ENSCCAG00000036784	TRIM39	100	98.807	ENSCJAG00000020681	TRIM39	100	98.807	Callithrix_jacchus
ENSCCAG00000036784	TRIM39	100	98.211	ENSCATG00000044044	TRIM39	100	98.211	Cercocebus_atys
ENSCCAG00000036784	TRIM39	100	97.813	ENSGGOG00000016403	TRIM39	100	97.813	Gorilla_gorilla
ENSCCAG00000036784	TRIM39	100	98.410	ENSMFAG00000046182	TRIM39	100	98.410	Macaca_fascicularis
ENSCCAG00000036784	TRIM39	100	98.410	ENSMMUG00000011682	RPP21	100	98.410	Macaca_mulatta
ENSCCAG00000036784	TRIM39	100	98.211	ENSMNEG00000034999	TRIM39	100	98.211	Macaca_nemestrina
ENSCCAG00000036784	TRIM39	100	98.410	ENSMLEG00000034263	TRIM39	100	98.410	Mandrillus_leucophaeus
ENSCCAG00000036784	TRIM39	100	97.813	ENSNLEG00000005026	TRIM39	100	97.813	Nomascus_leucogenys
ENSCCAG00000036784	TRIM39	100	98.012	ENSPPAG00000040674	TRIM39	100	98.012	Pan_paniscus
ENSCCAG00000036784	TRIM39	100	98.012	ENSPTRG00000017923	TRIM39	100	98.012	Pan_troglodytes
ENSCCAG00000036784	TRIM39	100	98.211	ENSPANG00000000655	TRIM39	100	98.211	Papio_anubis
ENSCCAG00000036784	TRIM39	100	98.410	ENSRBIG00000040889	TRIM39	100	98.410	Rhinopithecus_bieti
ENSCCAG00000036784	TRIM39	100	98.410	ENSRROG00000036496	TRIM39	100	98.410	Rhinopithecus_roxellana