EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000036822 (Gene tree)
Gene ID: 108305257
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 46531 bases
Position: chrKV389487.1:6405200-6451730
Accession: 108305257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000037968	PRP4	PF08799.11	1.4e-13	1	1
ENSCCAP00000037959	PRP4	PF08799.11	1.4e-13	1	1
ENSCCAP00000037962	PRP4	PF08799.11	1.5e-13	1	1
ENSCCAP00000037959	Prp18	PF02840.15	1.7e-62	1	1
ENSCCAP00000037962	Prp18	PF02840.15	2.1e-62	1	1
ENSCCAP00000037968	Prp18	PF02840.15	6.9e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000055751	-	5262	XM_017529834	ENSCCAP00000037959	342 (aa)	XP_017385323	A0A2K5SC29
ENSCCAT00000055760	-	1011	-	ENSCCAP00000037968	336 (aa)	-	A0A2K5SC83
ENSCCAT00000055754	-	1758	XM_017529833	ENSCCAP00000037962	351 (aa)	XP_017385322	A0A2K5SC53

Gene Model

Click here to download ENSCCAG00000036822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000036822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000036822	-	100	99.415	ENSG00000165630	PRPF18	100	99.415	Homo_sapiens
ENSCCAG00000036822	-	100	85.673	ENSAPOG00000024177	prpf18	100	85.673	Acanthochromis_polyacanthus
ENSCCAG00000036822	-	100	98.830	ENSAMEG00000013591	-	100	98.830	Ailuropoda_melanoleuca
ENSCCAG00000036822	-	100	84.211	ENSACIG00000001186	prpf18	100	84.211	Amphilophus_citrinellus
ENSCCAG00000036822	-	98	85.672	ENSAOCG00000006572	prpf18	94	83.965	Amphiprion_ocellaris
ENSCCAG00000036822	-	100	85.965	ENSAPEG00000004564	prpf18	100	85.965	Amphiprion_percula
ENSCCAG00000036822	-	100	84.503	ENSATEG00000000303	prpf18	100	84.503	Anabas_testudineus
ENSCCAG00000036822	-	99	91.471	ENSAPLG00000003387	-	99	91.471	Anas_platyrhynchos
ENSCCAG00000036822	-	100	91.570	ENSACAG00000000818	-	100	91.570	Anolis_carolinensis
ENSCCAG00000036822	-	100	100.000	ENSANAG00000037445	-	100	100.000	Aotus_nancymaae
ENSCCAG00000036822	-	100	84.795	ENSACLG00000026296	prpf18	100	84.795	Astatotilapia_calliptera
ENSCCAG00000036822	-	100	84.330	ENSAMXG00000012848	prpf18	100	84.330	Astyanax_mexicanus
ENSCCAG00000036822	-	100	98.575	ENSBTAG00000017244	PRPF18	100	98.575	Bos_taurus
ENSCCAG00000036822	-	98	38.395	WBGene00009320	F32B6.3	97	38.395	Caenorhabditis_elegans
ENSCCAG00000036822	-	100	100.000	ENSCJAG00000009432	-	100	100.000	Callithrix_jacchus
ENSCCAG00000036822	-	100	98.830	ENSCAFG00000004735	-	100	98.830	Canis_familiaris
ENSCCAG00000036822	-	100	98.830	ENSCAFG00020007712	-	100	98.830	Canis_lupus_dingo
ENSCCAG00000036822	-	100	98.575	ENSCHIG00000000499	-	100	98.575	Capra_hircus
ENSCCAG00000036822	-	100	98.575	ENSTSYG00000003517	-	100	98.575	Carlito_syrichta
ENSCCAG00000036822	-	100	99.415	ENSCPOG00000021069	-	100	99.415	Cavia_porcellus
ENSCCAG00000036822	-	100	88.304	ENSCATG00000016633	-	100	88.304	Cercocebus_atys
ENSCCAG00000036822	-	100	98.538	ENSCLAG00000011770	-	100	98.538	Chinchilla_lanigera
ENSCCAG00000036822	-	100	99.430	ENSCSAG00000013109	-	100	99.430	Chlorocebus_sabaeus
ENSCCAG00000036822	-	100	89.045	ENSCPBG00000003100	-	100	89.607	Chrysemys_picta_bellii
ENSCCAG00000036822	-	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSCCAG00000036822	-	99	54.335	ENSCSAVG00000010546	-	99	54.179	Ciona_savignyi
ENSCCAG00000036822	-	100	99.715	ENSCANG00000034900	-	100	99.715	Colobus_angolensis_palliatus
ENSCCAG00000036822	-	100	98.830	ENSCGRG00001023665	Prpf18	100	98.830	Cricetulus_griseus_chok1gshd
ENSCCAG00000036822	-	100	98.830	ENSCGRG00000014690	Prpf18	100	98.830	Cricetulus_griseus_crigri
ENSCCAG00000036822	-	100	83.041	ENSCSEG00000005536	prpf18	99	83.041	Cynoglossus_semilaevis
ENSCCAG00000036822	-	100	84.503	ENSCVAG00000012401	prpf18	100	84.503	Cyprinodon_variegatus
ENSCCAG00000036822	-	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSCCAG00000036822	-	100	98.246	ENSDNOG00000035607	-	100	98.246	Dasypus_novemcinctus
ENSCCAG00000036822	-	100	98.538	ENSDORG00000000858	Prpf18	100	98.538	Dipodomys_ordii
ENSCCAG00000036822	-	99	51.622	FBgn0027784	Prp18	98	51.327	Drosophila_melanogaster
ENSCCAG00000036822	-	100	87.135	ENSETEG00000015060	-	100	87.135	Echinops_telfairi
ENSCCAG00000036822	-	100	66.571	ENSEBUG00000016502	prpf18	99	65.706	Eptatretus_burgeri
ENSCCAG00000036822	-	100	99.145	ENSEASG00005019373	-	100	99.145	Equus_asinus_asinus
ENSCCAG00000036822	-	100	99.145	ENSECAG00000006997	PRPF18	100	99.145	Equus_caballus
ENSCCAG00000036822	-	77	100.000	ENSEEUG00000001171	-	100	62.658	Erinaceus_europaeus
ENSCCAG00000036822	-	100	82.216	ENSELUG00000022190	prpf18	100	82.216	Esox_lucius
ENSCCAG00000036822	-	100	98.575	ENSFCAG00000004436	-	100	98.575	Felis_catus
ENSCCAG00000036822	-	97	91.131	ENSFALG00000001912	-	98	91.131	Ficedula_albicollis
ENSCCAG00000036822	-	99	64.348	ENSFDAG00000010713	-	97	64.348	Fukomys_damarensis
ENSCCAG00000036822	-	94	98.750	ENSFDAG00000014026	-	100	98.750	Fukomys_damarensis
ENSCCAG00000036822	-	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSCCAG00000036822	-	99	80.059	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSCCAG00000036822	-	100	92.398	ENSGALG00000043593	-	100	92.398	Gallus_gallus
ENSCCAG00000036822	-	100	83.041	ENSGAFG00000006034	prpf18	100	83.041	Gambusia_affinis
ENSCCAG00000036822	-	100	81.579	ENSGACG00000012232	prpf18	100	81.579	Gasterosteus_aculeatus
ENSCCAG00000036822	-	100	92.398	ENSGAGG00000016878	-	100	92.398	Gopherus_agassizii
ENSCCAG00000036822	-	99	97.305	ENSGGOG00000025188	-	99	97.305	Gorilla_gorilla
ENSCCAG00000036822	-	100	84.795	ENSHBUG00000010264	prpf18	100	84.795	Haplochromis_burtoni
ENSCCAG00000036822	-	100	98.830	ENSHGLG00000018534	PRPF18	100	98.830	Heterocephalus_glaber_female
ENSCCAG00000036822	-	94	99.062	ENSHGLG00100012161	-	98	99.062	Heterocephalus_glaber_male
ENSCCAG00000036822	-	100	84.211	ENSHCOG00000015987	prpf18	100	84.211	Hippocampus_comes
ENSCCAG00000036822	-	100	82.153	ENSIPUG00000007432	prpf18	100	82.436	Ictalurus_punctatus
ENSCCAG00000036822	-	100	97.661	ENSSTOG00000008735	-	100	97.661	Ictidomys_tridecemlineatus
ENSCCAG00000036822	-	100	72.046	ENSJJAG00000015191	-	100	72.046	Jaculus_jaculus
ENSCCAG00000036822	-	100	99.415	ENSJJAG00000024041	-	100	99.415	Jaculus_jaculus
ENSCCAG00000036822	-	100	83.041	ENSKMAG00000012124	prpf18	100	83.041	Kryptolebias_marmoratus
ENSCCAG00000036822	-	99	83.432	ENSLBEG00000028466	prpf18	99	83.432	Labrus_bergylta
ENSCCAG00000036822	-	100	86.257	ENSLACG00000009885	prpf18	100	86.257	Latimeria_chalumnae
ENSCCAG00000036822	-	100	90.643	ENSLOCG00000016736	prpf18	100	90.643	Lepisosteus_oculatus
ENSCCAG00000036822	-	100	99.415	ENSLAFG00000007753	-	100	99.415	Loxodonta_africana
ENSCCAG00000036822	-	100	99.430	ENSMFAG00000000540	-	100	99.430	Macaca_fascicularis
ENSCCAG00000036822	-	100	99.430	ENSMMUG00000015071	PRPF18	100	99.430	Macaca_mulatta
ENSCCAG00000036822	-	100	99.430	ENSMNEG00000024679	-	100	99.430	Macaca_nemestrina
ENSCCAG00000036822	-	100	84.211	ENSMLEG00000031715	-	91	95.620	Mandrillus_leucophaeus
ENSCCAG00000036822	-	100	83.626	ENSMAMG00000006610	prpf18	100	83.626	Mastacembelus_armatus
ENSCCAG00000036822	-	100	84.795	ENSMZEG00005019392	prpf18	100	84.795	Maylandia_zebra
ENSCCAG00000036822	-	100	92.398	ENSMGAG00000005023	-	100	92.398	Meleagris_gallopavo
ENSCCAG00000036822	-	100	99.145	ENSMICG00000006572	-	100	99.145	Microcebus_murinus
ENSCCAG00000036822	-	100	99.415	ENSMOCG00000021468	Prpf18	100	99.415	Microtus_ochrogaster
ENSCCAG00000036822	-	100	83.333	ENSMMOG00000013012	prpf18	100	83.333	Mola_mola
ENSCCAG00000036822	-	97	95.385	ENSMODG00000016902	-	91	95.385	Monodelphis_domestica
ENSCCAG00000036822	-	100	85.088	ENSMODG00000024043	-	100	85.088	Monodelphis_domestica
ENSCCAG00000036822	-	100	78.000	ENSMALG00000005486	prpf18	100	78.286	Monopterus_albus
ENSCCAG00000036822	-	100	98.830	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSCCAG00000036822	-	100	98.538	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSCCAG00000036822	-	100	99.123	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSCCAG00000036822	-	100	98.246	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSCCAG00000036822	-	100	98.538	ENSMPUG00000000938	-	100	98.538	Mustela_putorius_furo
ENSCCAG00000036822	-	100	98.538	ENSMLUG00000009200	-	100	98.538	Myotis_lucifugus
ENSCCAG00000036822	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSCCAG00000036822	-	100	98.830	ENSNGAG00000012500	-	100	98.830	Nannospalax_galili
ENSCCAG00000036822	-	100	84.795	ENSNBRG00000001778	prpf18	100	84.795	Neolamprologus_brichardi
ENSCCAG00000036822	-	100	99.430	ENSNLEG00000012186	-	100	99.430	Nomascus_leucogenys
ENSCCAG00000036822	-	100	65.205	ENSMEUG00000005032	-	100	65.205	Notamacropus_eugenii
ENSCCAG00000036822	-	82	78.467	ENSOPRG00000002153	-	100	81.132	Ochotona_princeps
ENSCCAG00000036822	-	100	98.538	ENSODEG00000003770	-	100	98.538	Octodon_degus
ENSCCAG00000036822	-	98	84.179	ENSONIG00000014854	prpf18	96	84.179	Oreochromis_niloticus
ENSCCAG00000036822	-	100	94.152	ENSOANG00000015404	-	100	94.152	Ornithorhynchus_anatinus
ENSCCAG00000036822	-	100	99.123	ENSOCUG00000027756	-	100	95.029	Oryctolagus_cuniculus
ENSCCAG00000036822	-	100	82.621	ENSORLG00000010293	prpf18	100	82.621	Oryzias_latipes
ENSCCAG00000036822	-	100	84.211	ENSORLG00020001530	prpf18	100	84.211	Oryzias_latipes_hni
ENSCCAG00000036822	-	100	83.918	ENSORLG00015013705	prpf18	100	83.918	Oryzias_latipes_hsok
ENSCCAG00000036822	-	100	85.380	ENSOMEG00000009167	prpf18	100	85.380	Oryzias_melastigma
ENSCCAG00000036822	-	100	98.246	ENSOGAG00000007294	-	100	98.246	Otolemur_garnettii
ENSCCAG00000036822	-	100	98.575	ENSOARG00000006243	-	100	98.575	Ovis_aries
ENSCCAG00000036822	-	100	99.430	ENSPPAG00000041959	-	100	99.430	Pan_paniscus
ENSCCAG00000036822	-	100	98.538	ENSPPRG00000000107	-	100	98.538	Panthera_pardus
ENSCCAG00000036822	-	100	98.246	ENSPTIG00000021094	-	100	98.246	Panthera_tigris_altaica
ENSCCAG00000036822	-	100	99.430	ENSPTRG00000002306	PRPF18	100	99.430	Pan_troglodytes
ENSCCAG00000036822	-	100	99.145	ENSPANG00000023346	-	100	99.145	Papio_anubis
ENSCCAG00000036822	-	90	98.113	ENSPKIG00000014128	prpf18	96	83.476	Paramormyrops_kingsleyae
ENSCCAG00000036822	-	100	92.690	ENSPSIG00000016064	-	100	92.690	Pelodiscus_sinensis
ENSCCAG00000036822	-	100	78.655	ENSPMGG00000016486	prpf18	100	78.655	Periophthalmus_magnuspinnatus
ENSCCAG00000036822	-	100	99.123	ENSPEMG00000013704	Prpf18	100	99.123	Peromyscus_maniculatus_bairdii
ENSCCAG00000036822	-	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSCCAG00000036822	-	97	96.000	ENSPCIG00000012963	-	99	96.203	Phascolarctos_cinereus
ENSCCAG00000036822	-	100	82.051	ENSPFOG00000017611	prpf18	100	82.051	Poecilia_formosa
ENSCCAG00000036822	-	100	83.626	ENSPLAG00000000369	prpf18	100	83.626	Poecilia_latipinna
ENSCCAG00000036822	-	100	83.626	ENSPMEG00000005183	prpf18	100	83.626	Poecilia_mexicana
ENSCCAG00000036822	-	100	83.041	ENSPREG00000015232	prpf18	100	83.041	Poecilia_reticulata
ENSCCAG00000036822	-	100	99.123	ENSPPYG00000002101	PRPF18	100	99.123	Pongo_abelii
ENSCCAG00000036822	-	100	80.409	ENSPCAG00000010833	-	100	80.409	Procavia_capensis
ENSCCAG00000036822	-	100	91.813	ENSPCOG00000013057	-	100	91.813	Propithecus_coquereli
ENSCCAG00000036822	-	100	60.819	ENSPVAG00000002947	-	100	60.819	Pteropus_vampyrus
ENSCCAG00000036822	-	100	84.795	ENSPNYG00000003554	prpf18	100	84.795	Pundamilia_nyererei
ENSCCAG00000036822	-	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSCCAG00000036822	-	100	98.538	ENSRNOG00000018396	Prpf18	100	98.538	Rattus_norvegicus
ENSCCAG00000036822	-	100	99.430	ENSRBIG00000028028	-	100	99.430	Rhinopithecus_bieti
ENSCCAG00000036822	-	100	99.715	ENSRROG00000040695	-	100	99.715	Rhinopithecus_roxellana
ENSCCAG00000036822	-	100	100.000	ENSSBOG00000034482	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000036822	-	100	77.485	ENSSHAG00000009669	-	100	77.485	Sarcophilus_harrisii
ENSCCAG00000036822	-	100	96.199	ENSSHAG00000016463	-	100	96.199	Sarcophilus_harrisii
ENSCCAG00000036822	-	77	44.151	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSCCAG00000036822	-	98	83.188	ENSSFOG00015022118	prpf18	100	77.233	Scleropages_formosus
ENSCCAG00000036822	-	100	83.041	ENSSMAG00000005308	prpf18	100	83.041	Scophthalmus_maximus
ENSCCAG00000036822	-	100	85.088	ENSSDUG00000015428	prpf18	100	85.088	Seriola_dumerili
ENSCCAG00000036822	-	100	85.088	ENSSLDG00000023989	prpf18	100	85.088	Seriola_lalandi_dorsalis
ENSCCAG00000036822	-	100	68.421	ENSSARG00000005307	-	100	68.421	Sorex_araneus
ENSCCAG00000036822	-	100	92.398	ENSSPUG00000002619	-	100	92.398	Sphenodon_punctatus
ENSCCAG00000036822	-	100	84.795	ENSSPAG00000019502	prpf18	100	84.795	Stegastes_partitus
ENSCCAG00000036822	-	100	98.860	ENSSSCG00000026354	-	100	98.860	Sus_scrofa
ENSCCAG00000036822	-	100	92.398	ENSTGUG00000002286	-	100	92.398	Taeniopygia_guttata
ENSCCAG00000036822	-	100	82.164	ENSTRUG00000011278	prpf18	100	82.164	Takifugu_rubripes
ENSCCAG00000036822	-	100	81.871	ENSTNIG00000000911	prpf18	100	81.871	Tetraodon_nigroviridis
ENSCCAG00000036822	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSCCAG00000036822	-	100	99.123	ENSTTRG00000011117	PRPF18	100	99.123	Tursiops_truncatus
ENSCCAG00000036822	-	95	95.692	ENSUAMG00000001815	-	94	95.692	Ursus_americanus
ENSCCAG00000036822	-	100	93.860	ENSUMAG00000012329	-	100	93.860	Ursus_maritimus
ENSCCAG00000036822	-	100	93.275	ENSVPAG00000011486	-	100	93.275	Vicugna_pacos
ENSCCAG00000036822	-	100	98.860	ENSVVUG00000005453	-	100	98.860	Vulpes_vulpes
ENSCCAG00000036822	-	100	80.580	ENSXETG00000024057	prpf18	100	80.580	Xenopus_tropicalis
ENSCCAG00000036822	-	100	82.558	ENSXCOG00000020414	prpf18	100	82.558	Xiphophorus_couchianus
ENSCCAG00000036822	-	100	83.333	ENSXMAG00000004713	prpf18	91	83.333	Xiphophorus_maculatus