EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000037278 (Gene tree)
Gene ID: 108302823
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 78711 bases
Position: chrKV389468.1:14927911-15006621
Accession: 108302823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000038866	SpoU_methylase	PF00588.19	8.6e-30	1	1
ENSCCAP00000038874	SpoU_methylase	PF00588.19	9.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000056669	TARBP1-201	8989	XM_017526562	ENSCCAP00000038866	1621 (aa)	XP_017382051	A0A2K5SER3
ENSCCAT00000056677	TARBP1-202	8800	-	ENSCCAP00000038874	1558 (aa)	-	A0A2K5SER4

Gene Model

Click here to download ENSCCAG00000037278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000037278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000037278	TARBP1	100	94.818	ENSG00000059588	TARBP1	100	94.818	Homo_sapiens
ENSCCAG00000037278	TARBP1	99	41.880	ENSAPOG00000016419	si:dkey-85a20.4	88	44.384	Acanthochromis_polyacanthus
ENSCCAG00000037278	TARBP1	84	85.318	ENSAMEG00000003359	TARBP1	100	85.318	Ailuropoda_melanoleuca
ENSCCAG00000037278	TARBP1	86	45.550	ENSATEG00000020266	si:dkey-85a20.4	85	45.442	Anabas_testudineus
ENSCCAG00000037278	TARBP1	84	67.371	ENSAPLG00000007666	TARBP1	100	67.225	Anas_platyrhynchos
ENSCCAG00000037278	TARBP1	99	58.328	ENSACAG00000001142	TARBP1	99	58.145	Anolis_carolinensis
ENSCCAG00000037278	TARBP1	93	87.640	ENSANAG00000022031	TARBP1	100	89.019	Aotus_nancymaae
ENSCCAG00000037278	TARBP1	99	83.784	ENSBTAG00000004517	TARBP1	99	83.968	Bos_taurus
ENSCCAG00000037278	TARBP1	100	96.299	ENSCJAG00000018155	TARBP1	100	96.299	Callithrix_jacchus
ENSCCAG00000037278	TARBP1	88	85.366	ENSCAFG00000011533	TARBP1	100	85.664	Canis_familiaris
ENSCCAG00000037278	TARBP1	99	83.988	ENSCAFG00020027141	TARBP1	99	84.601	Canis_lupus_dingo
ENSCCAG00000037278	TARBP1	99	82.512	ENSCHIG00000011437	TARBP1	99	83.128	Capra_hircus
ENSCCAG00000037278	TARBP1	81	88.702	ENSTSYG00000010382	TARBP1	97	88.397	Carlito_syrichta
ENSCCAG00000037278	TARBP1	77	74.958	ENSCAPG00000010831	TARBP1	99	69.375	Cavia_aperea
ENSCCAG00000037278	TARBP1	99	80.541	ENSCPOG00000013995	TARBP1	99	76.096	Cavia_porcellus
ENSCCAG00000037278	TARBP1	100	94.571	ENSCATG00000011754	TARBP1	100	94.571	Cercocebus_atys
ENSCCAG00000037278	TARBP1	83	79.205	ENSCLAG00000003655	TARBP1	99	79.281	Chinchilla_lanigera
ENSCCAG00000037278	TARBP1	79	95.101	ENSCSAG00000010100	TARBP1	100	95.101	Chlorocebus_sabaeus
ENSCCAG00000037278	TARBP1	95	65.613	ENSCPBG00000005587	TARBP1	99	65.357	Chrysemys_picta_bellii
ENSCCAG00000037278	TARBP1	84	95.294	ENSCANG00000034343	TARBP1	100	95.294	Colobus_angolensis_palliatus
ENSCCAG00000037278	TARBP1	99	74.521	ENSCGRG00001016690	Tarbp1	99	74.335	Cricetulus_griseus_chok1gshd
ENSCCAG00000037278	TARBP1	90	76.099	ENSCGRG00000016893	Tarbp1	97	76.762	Cricetulus_griseus_crigri
ENSCCAG00000037278	TARBP1	99	39.733	ENSCSEG00000005255	si:dkey-85a20.4	83	49.004	Cynoglossus_semilaevis
ENSCCAG00000037278	TARBP1	99	41.834	ENSDARG00000079055	si:dkey-85a20.4	99	54.404	Danio_rerio
ENSCCAG00000037278	TARBP1	99	83.092	ENSDNOG00000008637	TARBP1	99	82.971	Dasypus_novemcinctus
ENSCCAG00000037278	TARBP1	80	74.151	ENSDORG00000007984	Tarbp1	100	74.151	Dipodomys_ordii
ENSCCAG00000037278	TARBP1	99	87.131	ENSEASG00005000252	TARBP1	99	87.131	Equus_asinus_asinus
ENSCCAG00000037278	TARBP1	99	87.069	ENSECAG00000023673	TARBP1	99	87.459	Equus_caballus
ENSCCAG00000037278	TARBP1	85	45.364	ENSELUG00000012193	si:dkey-85a20.4	86	45.364	Esox_lucius
ENSCCAG00000037278	TARBP1	99	83.262	ENSFCAG00000014183	TARBP1	99	83.200	Felis_catus
ENSCCAG00000037278	TARBP1	80	68.175	ENSFALG00000013565	TARBP1	99	68.095	Ficedula_albicollis
ENSCCAG00000037278	TARBP1	79	75.859	ENSFDAG00000001308	TARBP1	99	75.783	Fukomys_damarensis
ENSCCAG00000037278	TARBP1	81	54.596	ENSFHEG00000007565	si:dkey-85a20.4	79	54.596	Fundulus_heteroclitus
ENSCCAG00000037278	TARBP1	83	49.763	ENSGMOG00000004549	si:dkey-85a20.4	95	49.921	Gadus_morhua
ENSCCAG00000037278	TARBP1	97	64.300	ENSGALG00000011000	TARBP1	100	64.100	Gallus_gallus
ENSCCAG00000037278	TARBP1	85	54.545	ENSGAFG00000007387	si:dkey-85a20.4	82	54.545	Gambusia_affinis
ENSCCAG00000037278	TARBP1	85	53.257	ENSGACG00000005865	si:dkey-85a20.4	96	53.257	Gasterosteus_aculeatus
ENSCCAG00000037278	TARBP1	99	66.606	ENSGAGG00000012102	TARBP1	99	70.183	Gopherus_agassizii
ENSCCAG00000037278	TARBP1	85	92.213	ENSGGOG00000022879	TARBP1	99	92.213	Gorilla_gorilla
ENSCCAG00000037278	TARBP1	86	46.371	ENSHBUG00000008877	si:dkey-85a20.4	85	46.317	Haplochromis_burtoni
ENSCCAG00000037278	TARBP1	99	77.517	ENSHGLG00000011592	TARBP1	99	77.579	Heterocephalus_glaber_female
ENSCCAG00000037278	TARBP1	94	78.332	ENSHGLG00100015169	TARBP1	99	78.158	Heterocephalus_glaber_male
ENSCCAG00000037278	TARBP1	99	39.988	ENSIPUG00000005249	si:dkey-85a20.4	84	43.500	Ictalurus_punctatus
ENSCCAG00000037278	TARBP1	87	76.506	ENSSTOG00000032291	TARBP1	99	76.357	Ictidomys_tridecemlineatus
ENSCCAG00000037278	TARBP1	93	76.539	ENSJJAG00000017840	Tarbp1	99	72.915	Jaculus_jaculus
ENSCCAG00000037278	TARBP1	71	47.727	ENSKMAG00000017546	si:dkey-85a20.4	71	48.821	Kryptolebias_marmoratus
ENSCCAG00000037278	TARBP1	65	50.798	ENSLBEG00000012132	si:dkey-85a20.4	74	50.798	Labrus_bergylta
ENSCCAG00000037278	TARBP1	99	63.184	ENSLACG00000004337	TARBP1	96	63.184	Latimeria_chalumnae
ENSCCAG00000037278	TARBP1	99	46.727	ENSLOCG00000016214	si:dkey-85a20.4	86	50.739	Lepisosteus_oculatus
ENSCCAG00000037278	TARBP1	96	81.624	ENSLAFG00000011394	TARBP1	99	81.675	Loxodonta_africana
ENSCCAG00000037278	TARBP1	100	90.932	ENSMFAG00000041068	TARBP1	100	90.943	Macaca_fascicularis
ENSCCAG00000037278	TARBP1	100	91.867	ENSMMUG00000021703	TARBP1	100	92.062	Macaca_mulatta
ENSCCAG00000037278	TARBP1	100	94.633	ENSMNEG00000045002	TARBP1	100	94.633	Macaca_nemestrina
ENSCCAG00000037278	TARBP1	84	95.277	ENSMLEG00000044182	TARBP1	100	95.277	Mandrillus_leucophaeus
ENSCCAG00000037278	TARBP1	95	43.606	ENSMAMG00000021760	si:dkey-85a20.4	89	44.759	Mastacembelus_armatus
ENSCCAG00000037278	TARBP1	86	46.300	ENSMZEG00005005751	si:dkey-85a20.4	85	46.246	Maylandia_zebra
ENSCCAG00000037278	TARBP1	99	73.593	ENSMAUG00000020968	Tarbp1	99	73.469	Mesocricetus_auratus
ENSCCAG00000037278	TARBP1	99	79.582	ENSMICG00000015280	TARBP1	99	79.395	Microcebus_murinus
ENSCCAG00000037278	TARBP1	99	73.391	ENSMOCG00000004128	Tarbp1	99	73.391	Microtus_ochrogaster
ENSCCAG00000037278	TARBP1	99	41.208	ENSMMOG00000007795	si:dkey-85a20.4	85	44.145	Mola_mola
ENSCCAG00000037278	TARBP1	99	79.698	ENSMODG00000008504	TARBP1	100	72.135	Monodelphis_domestica
ENSCCAG00000037278	TARBP1	84	54.486	ENSMALG00000002916	si:dkey-85a20.4	82	54.486	Monopterus_albus
ENSCCAG00000037278	TARBP1	99	72.570	MGP_CAROLIEiJ_G0031729	Tarbp1	99	72.384	Mus_caroli
ENSCCAG00000037278	TARBP1	99	72.446	ENSMUSG00000090290	Tarbp1	96	79.564	Mus_musculus
ENSCCAG00000037278	TARBP1	99	79.397	MGP_PahariEiJ_G0023326	Tarbp1	96	79.397	Mus_pahari
ENSCCAG00000037278	TARBP1	99	72.593	MGP_SPRETEiJ_G0032846	Tarbp1	99	72.407	Mus_spretus
ENSCCAG00000037278	TARBP1	77	83.736	ENSMPUG00000002802	TARBP1	99	83.655	Mustela_putorius_furo
ENSCCAG00000037278	TARBP1	84	74.927	ENSMLUG00000002414	TARBP1	99	74.927	Myotis_lucifugus
ENSCCAG00000037278	TARBP1	100	95.188	ENSNLEG00000002518	TARBP1	100	95.188	Nomascus_leucogenys
ENSCCAG00000037278	TARBP1	70	77.331	ENSMEUG00000011370	-	67	77.331	Notamacropus_eugenii
ENSCCAG00000037278	TARBP1	73	86.288	ENSOPRG00000013822	TARBP1	71	86.401	Ochotona_princeps
ENSCCAG00000037278	TARBP1	99	73.626	ENSODEG00000005238	TARBP1	99	73.379	Octodon_degus
ENSCCAG00000037278	TARBP1	86	45.986	ENSONIG00000009789	si:dkey-85a20.4	99	45.986	Oreochromis_niloticus
ENSCCAG00000037278	TARBP1	100	84.914	ENSOCUG00000017418	TARBP1	99	84.791	Oryctolagus_cuniculus
ENSCCAG00000037278	TARBP1	99	40.108	ENSORLG00000010529	si:dkey-85a20.4	85	43.117	Oryzias_latipes
ENSCCAG00000037278	TARBP1	99	39.952	ENSORLG00020019264	si:dkey-85a20.4	88	42.410	Oryzias_latipes_hni
ENSCCAG00000037278	TARBP1	99	40.253	ENSORLG00015003276	si:dkey-85a20.4	85	43.228	Oryzias_latipes_hsok
ENSCCAG00000037278	TARBP1	99	84.084	ENSOGAG00000002379	TARBP1	100	83.837	Otolemur_garnettii
ENSCCAG00000037278	TARBP1	98	83.659	ENSOARG00000003434	TARBP1	99	83.646	Ovis_aries
ENSCCAG00000037278	TARBP1	84	95.965	ENSPPAG00000028097	TARBP1	100	95.965	Pan_paniscus
ENSCCAG00000037278	TARBP1	95	84.524	ENSPPRG00000013561	TARBP1	99	85.802	Panthera_pardus
ENSCCAG00000037278	TARBP1	83	85.938	ENSPTIG00000009281	TARBP1	99	85.938	Panthera_tigris_altaica
ENSCCAG00000037278	TARBP1	100	94.948	ENSPTRG00000002124	TARBP1	100	94.886	Pan_troglodytes
ENSCCAG00000037278	TARBP1	100	94.818	ENSPANG00000021933	TARBP1	100	94.818	Papio_anubis
ENSCCAG00000037278	TARBP1	100	54.414	ENSPKIG00000016716	si:dkey-85a20.4	82	54.414	Paramormyrops_kingsleyae
ENSCCAG00000037278	TARBP1	78	76.073	ENSPSIG00000010699	TARBP1	95	76.073	Pelodiscus_sinensis
ENSCCAG00000037278	TARBP1	97	81.742	ENSPEMG00000006888	Tarbp1	96	81.742	Peromyscus_maniculatus_bairdii
ENSCCAG00000037278	TARBP1	92	82.039	ENSPCIG00000029710	TARBP1	99	82.039	Phascolarctos_cinereus
ENSCCAG00000037278	TARBP1	86	45.236	ENSPFOG00000013020	si:dkey-85a20.4	99	45.300	Poecilia_formosa
ENSCCAG00000037278	TARBP1	86	45.448	ENSPLAG00000006044	si:dkey-85a20.4	85	45.300	Poecilia_latipinna
ENSCCAG00000037278	TARBP1	99	41.906	ENSPMEG00000017857	si:dkey-85a20.4	85	45.230	Poecilia_mexicana
ENSCCAG00000037278	TARBP1	85	55.207	ENSPREG00000022753	si:dkey-85a20.4	82	55.372	Poecilia_reticulata
ENSCCAG00000037278	TARBP1	97	95.672	ENSPPYG00000000102	TARBP1	100	95.672	Pongo_abelii
ENSCCAG00000037278	TARBP1	85	92.000	ENSPCAG00000004808	TARBP1	85	92.000	Procavia_capensis
ENSCCAG00000037278	TARBP1	99	86.058	ENSPCOG00000005666	TARBP1	100	85.441	Propithecus_coquereli
ENSCCAG00000037278	TARBP1	99	67.301	ENSPVAG00000014798	TARBP1	99	67.752	Pteropus_vampyrus
ENSCCAG00000037278	TARBP1	86	45.397	ENSPNYG00000019135	si:dkey-85a20.4	85	45.184	Pundamilia_nyererei
ENSCCAG00000037278	TARBP1	99	69.347	ENSRNOG00000053574	Tarbp1	99	68.314	Rattus_norvegicus
ENSCCAG00000037278	TARBP1	99	88.329	ENSRBIG00000043362	TARBP1	100	88.611	Rhinopithecus_bieti
ENSCCAG00000037278	TARBP1	98	93.583	ENSRROG00000029527	TARBP1	100	93.183	Rhinopithecus_roxellana
ENSCCAG00000037278	TARBP1	87	97.191	ENSSBOG00000034503	TARBP1	100	97.191	Saimiri_boliviensis_boliviensis
ENSCCAG00000037278	TARBP1	83	75.829	ENSSHAG00000000013	TARBP1	100	75.829	Sarcophilus_harrisii
ENSCCAG00000037278	TARBP1	91	44.265	ENSSFOG00015002660	si:dkey-85a20.4	97	47.226	Scleropages_formosus
ENSCCAG00000037278	TARBP1	91	44.219	ENSSMAG00000007081	si:dkey-85a20.4	88	45.161	Scophthalmus_maximus
ENSCCAG00000037278	TARBP1	99	41.570	ENSSDUG00000023566	si:dkey-85a20.4	86	44.507	Seriola_dumerili
ENSCCAG00000037278	TARBP1	99	56.126	ENSSLDG00000020200	si:dkey-85a20.4	82	56.126	Seriola_lalandi_dorsalis
ENSCCAG00000037278	TARBP1	89	84.793	ENSSARG00000012207	TARBP1	89	84.793	Sorex_araneus
ENSCCAG00000037278	TARBP1	99	76.073	ENSSPUG00000015364	TARBP1	96	76.073	Sphenodon_punctatus
ENSCCAG00000037278	TARBP1	91	44.073	ENSSPAG00000007213	si:dkey-85a20.4	89	44.505	Stegastes_partitus
ENSCCAG00000037278	TARBP1	99	85.108	ENSSSCG00000010160	TARBP1	99	85.392	Sus_scrofa
ENSCCAG00000037278	TARBP1	80	68.296	ENSTGUG00000010214	TARBP1	100	68.296	Taeniopygia_guttata
ENSCCAG00000037278	TARBP1	91	51.487	ENSTNIG00000016586	si:dkey-85a20.4	95	54.215	Tetraodon_nigroviridis
ENSCCAG00000037278	TARBP1	91	82.838	ENSTTRG00000008707	TARBP1	95	82.838	Tursiops_truncatus
ENSCCAG00000037278	TARBP1	82	84.864	ENSUMAG00000006730	TARBP1	99	84.864	Ursus_maritimus
ENSCCAG00000037278	TARBP1	80	91.753	ENSVPAG00000007665	TARBP1	85	91.753	Vicugna_pacos
ENSCCAG00000037278	TARBP1	85	85.766	ENSVVUG00000007460	TARBP1	97	85.477	Vulpes_vulpes
ENSCCAG00000037278	TARBP1	84	56.569	ENSXETG00000016224	tarbp1	99	56.496	Xenopus_tropicalis
ENSCCAG00000037278	TARBP1	78	49.116	ENSXCOG00000011779	si:dkey-85a20.4	93	49.116	Xiphophorus_couchianus
ENSCCAG00000037278	TARBP1	63	52.518	ENSXMAG00000009600	si:dkey-85a20.4	94	52.518	Xiphophorus_maculatus