EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCCAG00000037306 (Gene tree)
Gene ID
108288857
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Cebus_capucinus
Status
putative
Strand
Plus strand
Length
15376 bases
Position
chrKV389811.1:2075800-2091175
Accession
108288857
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCCAP00000038943PABPPF00658.182.2e-3111
ENSCCAP00000038940PABPPF00658.182.5e-3111
ENSCCAP00000038943RRM_5PF13893.66.2e-0911
ENSCCAP00000038940RRM_5PF13893.67.9e-0911
ENSCCAP00000038943RRM_1PF00076.225.5e-9214
ENSCCAP00000038943RRM_1PF00076.225.5e-9224
ENSCCAP00000038943RRM_1PF00076.225.5e-9234
ENSCCAP00000038943RRM_1PF00076.225.5e-9244
ENSCCAP00000038940RRM_1PF00076.227e-9214
ENSCCAP00000038940RRM_1PF00076.227e-9224
ENSCCAP00000038940RRM_1PF00076.227e-9234
ENSCCAP00000038940RRM_1PF00076.227e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCCAT00000056746PABPC4-2023093XM_017507987ENSCCAP00000038943630 (aa)XP_017363476A0A2K5SEZ1
ENSCCAT00000056743PABPC4-2013191XM_017507984ENSCCAP00000038940659 (aa)XP_017363473A0A2K5SEX8
Gene Model
Click here to download ENSCCAG00000037306's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000037306's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCCAG00000037306PABPC45931.579ENSCCAG00000024508ELAVL28734.940
ENSCCAG00000037306PABPC46034.722ENSCCAG00000034350ELAVL39233.735
ENSCCAG00000037306PABPC45332.353ENSCCAG00000000551-5532.593
ENSCCAG00000037306PABPC46067.135ENSCCAG00000032154PABPC59666.942
ENSCCAG00000037306PABPC45830.961ENSCCAG00000025328ELAVL19431.095
ENSCCAG00000037306PABPC49169.707ENSCCAG00000031750-9768.412
ENSCCAG00000037306PABPC45832.099ENSCCAG00000024797ELAVL48730.921
ENSCCAG00000037306PABPC49971.875ENSCCAG00000037208PABPC39971.900
ENSCCAG00000037306PABPC48574.157ENSCCAG00000028512-10074.157
ENSCCAG00000037306PABPC45732.911ENSCCAG00000036430TIA18332.911
ENSCCAG00000037306PABPC45036.111ENSCCAG00000038019-8340.000
ENSCCAG00000037306PABPC49983.019ENSCCAG00000037733-9983.019
ENSCCAG00000037306PABPC48767.692ENSCCAG00000031444-10067.946
ENSCCAG00000037306PABPC49866.720ENSCCAG00000023338PABPC1L9966.720
ENSCCAG00000037306PABPC46273.784ENSCCAG00000031681PABPC4L8773.784
ENSCCAG00000037306PABPC45834.722ENSCCAG00000028584-7334.722
ENSCCAG00000037306PABPC45837.500ENSCCAG00000020159CELF26137.500
ENSCCAG00000037306PABPC45876.650ENSCCAG00000031524-9976.650
ENSCCAG00000037306PABPC45430.864ENSCCAG00000010302HNRNPA05331.788
ENSCCAG00000037306PABPC45530.675ENSCCAG00000027590-7230.675
ENSCCAG00000037306PABPC49961.295ENSCCAG00000027395-9861.295
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCCAG00000037306PABPC410099.848ENSG00000090621PABPC4100100.000Homo_sapiens
ENSCCAG00000037306PABPC49983.201ENSAPOG00000001161pabpc410082.298Acanthochromis_polyacanthus
ENSCCAG00000037306PABPC49857.395ENSAMEG00000015083-9957.074Ailuropoda_melanoleuca
ENSCCAG00000037306PABPC410098.788ENSAMEG00000011535-10098.788Ailuropoda_melanoleuca
ENSCCAG00000037306PABPC410083.281ENSACIG00000023343pabpc410083.906Amphilophus_citrinellus
ENSCCAG00000037306PABPC49983.360ENSAOCG00000021529pabpc410083.594Amphiprion_ocellaris
ENSCCAG00000037306PABPC49983.360ENSAPEG00000019196pabpc410083.594Amphiprion_percula
ENSCCAG00000037306PABPC49982.622ENSATEG00000007402pabpc410082.426Anabas_testudineus
ENSCCAG00000037306PABPC49991.270ENSAPLG00000009729-10091.270Anas_platyrhynchos
ENSCCAG00000037306PABPC49989.982ENSACAG00000002544PABPC410089.982Anolis_carolinensis
ENSCCAG00000037306PABPC410099.697ENSANAG00000025079PABPC410099.697Aotus_nancymaae
ENSCCAG00000037306PABPC410082.812ENSACLG00000019558pabpc410082.893Astatotilapia_calliptera
ENSCCAG00000037306PABPC49979.206ENSAMXG00000018779pabpc49979.841Astyanax_mexicanus
ENSCCAG00000037306PABPC410096.369ENSBTAG00000017125PABPC410096.369Bos_taurus
ENSCCAG00000037306PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSCCAG00000037306PABPC47890.164ENSCJAG00000045953-9290.123Callithrix_jacchus
ENSCCAG00000037306PABPC410099.545ENSCJAG00000002512-10099.545Callithrix_jacchus
ENSCCAG00000037306PABPC410099.049ENSCAFG00000003081PABPC410099.049Canis_familiaris
ENSCCAG00000037306PABPC410098.939ENSCAFG00020004161PABPC410098.939Canis_lupus_dingo
ENSCCAG00000037306PABPC410076.364ENSCHIG00000023385-10076.364Capra_hircus
ENSCCAG00000037306PABPC410098.788ENSCHIG00000019398-10098.788Capra_hircus
ENSCCAG00000037306PABPC410099.242ENSTSYG00000006532PABPC410099.242Carlito_syrichta
ENSCCAG00000037306PABPC49999.240ENSCAPG00000015984PABPC410099.240Cavia_aperea
ENSCCAG00000037306PABPC410099.242ENSCPOG00000009552PABPC410099.242Cavia_porcellus
ENSCCAG00000037306PABPC410099.697ENSCATG00000042164PABPC410099.697Cercocebus_atys
ENSCCAG00000037306PABPC410098.939ENSCLAG00000011899PABPC410098.939Chinchilla_lanigera
ENSCCAG00000037306PABPC410099.697ENSCSAG00000001135PABPC410099.697Chlorocebus_sabaeus
ENSCCAG00000037306PABPC48697.361ENSCHOG00000005327PABPC48197.361Choloepus_hoffmanni
ENSCCAG00000037306PABPC49991.587ENSCPBG00000001038PABPC410091.587Chrysemys_picta_bellii
ENSCCAG00000037306PABPC49999.539ENSCANG00000034177PABPC410099.539Colobus_angolensis_palliatus
ENSCCAG00000037306PABPC410097.139ENSCGRG00001018166Pabpc410097.139Cricetulus_griseus_chok1gshd
ENSCCAG00000037306PABPC49994.656ENSCGRG00000009777Pabpc410094.656Cricetulus_griseus_crigri
ENSCCAG00000037306PABPC410082.500ENSCSEG00000000130pabpc410082.582Cynoglossus_semilaevis
ENSCCAG00000037306PABPC49983.466ENSCVAG00000019246pabpc410083.703Cyprinodon_variegatus
ENSCCAG00000037306PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSCCAG00000037306PABPC49999.286ENSDNOG00000018444-10099.286Dasypus_novemcinctus
ENSCCAG00000037306PABPC410096.818ENSDORG00000011581Pabpc410096.818Dipodomys_ordii
ENSCCAG00000037306PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSCCAG00000037306PABPC48664.935ENSETEG00000009172-9964.954Echinops_telfairi
ENSCCAG00000037306PABPC49777.023ENSEBUG00000013782pabpc49976.228Eptatretus_burgeri
ENSCCAG00000037306PABPC49976.424ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSCCAG00000037306PABPC410099.394ENSEASG00005014119PABPC410099.394Equus_asinus_asinus
ENSCCAG00000037306PABPC410099.394ENSECAG00000009396PABPC410099.394Equus_caballus
ENSCCAG00000037306PABPC410096.061ENSEEUG00000002962PABPC410096.061Erinaceus_europaeus
ENSCCAG00000037306PABPC49983.439ENSELUG00000003195pabpc49884.019Esox_lucius
ENSCCAG00000037306PABPC410099.091ENSFCAG00000015254-10099.091Felis_catus
ENSCCAG00000037306PABPC49990.794ENSFALG00000000543PABPC410090.794Ficedula_albicollis
ENSCCAG00000037306PABPC49067.010ENSFDAG00000010581-10063.131Fukomys_damarensis
ENSCCAG00000037306PABPC410099.242ENSFDAG00000020016-10099.242Fukomys_damarensis
ENSCCAG00000037306PABPC410083.255ENSFHEG00000007548pabpc49888.362Fundulus_heteroclitus
ENSCCAG00000037306PABPC49982.808ENSGMOG00000019025pabpc49983.438Gadus_morhua
ENSCCAG00000037306PABPC49991.587ENSGALG00000003800PABPC410091.587Gallus_gallus
ENSCCAG00000037306PABPC49990.330ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSCCAG00000037306PABPC410081.435ENSGACG00000007179pabpc410082.059Gasterosteus_aculeatus
ENSCCAG00000037306PABPC49991.429ENSGAGG00000001888PABPC410091.429Gopherus_agassizii
ENSCCAG00000037306PABPC410099.848ENSGGOG00000004002PABPC410099.848Gorilla_gorilla
ENSCCAG00000037306PABPC410082.969ENSHBUG00000020206pabpc410083.048Haplochromis_burtoni
ENSCCAG00000037306PABPC410099.394ENSHGLG00000011162PABPC410099.394Heterocephalus_glaber_female
ENSCCAG00000037306PABPC410099.366ENSHGLG00100001580PABPC410099.366Heterocephalus_glaber_male
ENSCCAG00000037306PABPC410082.160ENSHCOG00000012694pabpc410082.786Hippocampus_comes
ENSCCAG00000037306PABPC49883.146ENSIPUG00000016620pabpc49983.176Ictalurus_punctatus
ENSCCAG00000037306PABPC410096.818ENSSTOG00000010416PABPC410096.818Ictidomys_tridecemlineatus
ENSCCAG00000037306PABPC410094.545ENSJJAG00000007781Pabpc410094.545Jaculus_jaculus
ENSCCAG00000037306PABPC49982.835ENSKMAG00000013597pabpc49982.344Kryptolebias_marmoratus
ENSCCAG00000037306PABPC410082.582ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSCCAG00000037306PABPC49987.697ENSLACG00000011907PABPC410087.697Latimeria_chalumnae
ENSCCAG00000037306PABPC49985.354ENSLOCG00000001877pabpc49986.142Lepisosteus_oculatus
ENSCCAG00000037306PABPC410098.939ENSLAFG00000000151PABPC410098.939Loxodonta_africana
ENSCCAG00000037306PABPC410099.697ENSMFAG00000041481PABPC410099.697Macaca_fascicularis
ENSCCAG00000037306PABPC410099.697ENSMMUG00000007497PABPC410099.697Macaca_mulatta
ENSCCAG00000037306PABPC410099.545ENSMNEG00000043054PABPC410099.545Macaca_nemestrina
ENSCCAG00000037306PABPC410099.697ENSMLEG00000040716PABPC410099.697Mandrillus_leucophaeus
ENSCCAG00000037306PABPC49983.201ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSCCAG00000037306PABPC410082.656ENSMZEG00005006141pabpc49390.583Maylandia_zebra
ENSCCAG00000037306PABPC49987.734ENSMGAG00000005408PABPC410087.734Meleagris_gallopavo
ENSCCAG00000037306PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSCCAG00000037306PABPC476100.000ENSMAUG00000019763-8495.283Mesocricetus_auratus
ENSCCAG00000037306PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCCAG00000037306PABPC48996.263ENSMICG00000016633-10096.263Microcebus_murinus
ENSCCAG00000037306PABPC49984.698ENSMICG00000036729-10085.409Microcebus_murinus
ENSCCAG00000037306PABPC410097.590ENSMOCG00000006763Pabpc410097.590Microtus_ochrogaster
ENSCCAG00000037306PABPC410080.346ENSMMOG00000002363pabpc49979.507Mola_mola
ENSCCAG00000037306PABPC45973.729ENSMODG00000018051-9173.729Monodelphis_domestica
ENSCCAG00000037306PABPC49889.043ENSMODG00000017657-10088.636Monodelphis_domestica
ENSCCAG00000037306PABPC49982.938ENSMALG00000011017pabpc410082.481Monopterus_albus
ENSCCAG00000037306PABPC49983.559MGP_CAROLIEiJ_G0024864-10083.559Mus_caroli
ENSCCAG00000037306PABPC410097.273MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCCAG00000037306PABPC410097.727ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSCCAG00000037306PABPC49997.389MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCCAG00000037306PABPC49978.455MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCCAG00000037306PABPC49553.642ENSMPUG00000006836-10053.477Mustela_putorius_furo
ENSCCAG00000037306PABPC410099.091ENSMPUG00000014414-10099.091Mustela_putorius_furo
ENSCCAG00000037306PABPC410096.513ENSMLUG00000012068PABPC410096.513Myotis_lucifugus
ENSCCAG00000037306PABPC410096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSCCAG00000037306PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSCCAG00000037306PABPC46092.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSCCAG00000037306PABPC410099.683ENSNLEG00000011928PABPC410099.683Nomascus_leucogenys
ENSCCAG00000037306PABPC48598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSCCAG00000037306PABPC49989.117ENSODEG00000017434-10089.002Octodon_degus
ENSCCAG00000037306PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSCCAG00000037306PABPC410098.333ENSODEG00000006592-10098.333Octodon_degus
ENSCCAG00000037306PABPC410082.969ENSONIG00000008176pabpc410083.594Oreochromis_niloticus
ENSCCAG00000037306PABPC49991.111ENSOANG00000010001PABPC410091.111Ornithorhynchus_anatinus
ENSCCAG00000037306PABPC49699.051ENSOCUG00000000562PABPC48899.051Oryctolagus_cuniculus
ENSCCAG00000037306PABPC49990.741ENSORLG00000017479pabpc49990.741Oryzias_latipes
ENSCCAG00000037306PABPC49990.741ENSORLG00020018644pabpc49990.741Oryzias_latipes_hni
ENSCCAG00000037306PABPC49990.741ENSORLG00015015042pabpc49990.741Oryzias_latipes_hsok
ENSCCAG00000037306PABPC49983.043ENSOMEG00000014410pabpc49983.491Oryzias_melastigma
ENSCCAG00000037306PABPC410096.682ENSOGAG00000004067PABPC410096.682Otolemur_garnettii
ENSCCAG00000037306PABPC410098.788ENSOARG00000020060PABPC410098.788Ovis_aries
ENSCCAG00000037306PABPC410099.848ENSPPAG00000043625PABPC410099.848Pan_paniscus
ENSCCAG00000037306PABPC410099.091ENSPPRG00000024727PABPC410099.091Panthera_pardus
ENSCCAG00000037306PABPC410099.091ENSPTIG00000005829PABPC410099.091Panthera_tigris_altaica
ENSCCAG00000037306PABPC410099.848ENSPTRG00000000573PABPC410099.848Pan_troglodytes
ENSCCAG00000037306PABPC410099.545ENSPANG00000009484PABPC410099.545Papio_anubis
ENSCCAG00000037306PABPC49984.494ENSPKIG00000025356pabpc49985.127Paramormyrops_kingsleyae
ENSCCAG00000037306PABPC49991.587ENSPSIG00000016892PABPC410091.587Pelodiscus_sinensis
ENSCCAG00000037306PABPC410081.102ENSPMGG00000009073pabpc49981.162Periophthalmus_magnuspinnatus
ENSCCAG00000037306PABPC410091.061ENSPEMG00000024193-9991.061Peromyscus_maniculatus_bairdii
ENSCCAG00000037306PABPC410097.273ENSPEMG00000023569-9997.273Peromyscus_maniculatus_bairdii
ENSCCAG00000037306PABPC49570.902ENSPMAG00000007885pabpc410069.428Petromyzon_marinus
ENSCCAG00000037306PABPC48973.657ENSPMAG00000002836pabpc410073.368Petromyzon_marinus
ENSCCAG00000037306PABPC49793.795ENSPCIG00000020674PABPC410093.571Phascolarctos_cinereus
ENSCCAG00000037306PABPC410082.786ENSPFOG00000002682pabpc410082.764Poecilia_formosa
ENSCCAG00000037306PABPC410082.629ENSPLAG00000010112pabpc410083.178Poecilia_latipinna
ENSCCAG00000037306PABPC49983.307ENSPMEG00000019739pabpc410082.919Poecilia_mexicana
ENSCCAG00000037306PABPC410083.220ENSPREG00000001589pabpc410083.220Poecilia_reticulata
ENSCCAG00000037306PABPC410099.848ENSPPYG00000001506PABPC410099.848Pongo_abelii
ENSCCAG00000037306PABPC410094.091ENSPCAG00000003341PABPC410094.091Procavia_capensis
ENSCCAG00000037306PABPC49982.483ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSCCAG00000037306PABPC410099.395ENSPCOG00000023725-10099.395Propithecus_coquereli
ENSCCAG00000037306PABPC49998.487ENSPVAG00000002187PABPC410098.487Pteropus_vampyrus
ENSCCAG00000037306PABPC410082.812ENSPNYG00000006134pabpc410082.893Pundamilia_nyererei
ENSCCAG00000037306PABPC410083.412ENSPNAG00000024355pabpc410084.038Pygocentrus_nattereri
ENSCCAG00000037306PABPC410095.455ENSRNOG00000015642Pabpc410095.455Rattus_norvegicus
ENSCCAG00000037306PABPC410093.333ENSRNOG00000028592AABR07035074.110093.333Rattus_norvegicus
ENSCCAG00000037306PABPC410099.697ENSRBIG00000039761PABPC410099.697Rhinopithecus_bieti
ENSCCAG00000037306PABPC410099.697ENSRROG00000033355PABPC410099.697Rhinopithecus_roxellana
ENSCCAG00000037306PABPC410099.848ENSSBOG00000026193PABPC410099.848Saimiri_boliviensis_boliviensis
ENSCCAG00000037306PABPC49892.395ENSSHAG00000018139PABPC410091.905Sarcophilus_harrisii
ENSCCAG00000037306PABPC49985.714ENSSFOG00015023514pabpc49985.714Scleropages_formosus
ENSCCAG00000037306PABPC49982.437ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSCCAG00000037306PABPC49982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSCCAG00000037306PABPC49982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSCCAG00000037306PABPC410091.818ENSSARG00000000310PABPC410091.818Sorex_araneus
ENSCCAG00000037306PABPC49989.841ENSSPUG00000003204PABPC410089.841Sphenodon_punctatus
ENSCCAG00000037306PABPC49990.562ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSCCAG00000037306PABPC48950.253ENSSSCG00000036170-9650.084Sus_scrofa
ENSCCAG00000037306PABPC410098.939ENSSSCG00000003660-10098.939Sus_scrofa
ENSCCAG00000037306PABPC49987.443ENSTGUG00000001266PABPC410087.443Taeniopygia_guttata
ENSCCAG00000037306PABPC410082.075ENSTRUG00000005907pabpc49982.003Takifugu_rubripes
ENSCCAG00000037306PABPC410078.165ENSTNIG00000016902pabpc48790.843Tetraodon_nigroviridis
ENSCCAG00000037306PABPC49988.403ENSTBEG00000009035PABPC410088.403Tupaia_belangeri
ENSCCAG00000037306PABPC49983.333ENSTTRG00000014340PABPC410086.891Tursiops_truncatus
ENSCCAG00000037306PABPC410098.891ENSUAMG00000000303PABPC410098.891Ursus_americanus
ENSCCAG00000037306PABPC410098.788ENSUMAG00000019585PABPC410098.788Ursus_maritimus
ENSCCAG00000037306PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSCCAG00000037306PABPC410099.049ENSVVUG00000005215PABPC410099.049Vulpes_vulpes
ENSCCAG00000037306PABPC49983.175ENSXETG00000010946pabpc410083.175Xenopus_tropicalis
ENSCCAG00000037306PABPC45997.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSCCAG00000037306PABPC49989.091ENSXCOG00000013190pabpc49689.623Xiphophorus_couchianus
ENSCCAG00000037306PABPC410082.786ENSXMAG00000019007pabpc410083.022Xiphophorus_maculatus

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