EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000037658 (Gene tree)
Gene ID: 108291335
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 20724 bases
Position: chrKV389875.1:3079127-3099850
Accession: 108291335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000039704	CPSF_A	PF03178.15	1e-91	1	1
ENSCCAP00000039709	CPSF_A	PF03178.15	8.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000057513	CPSF1-201	7295	XM_017511662	ENSCCAP00000039704	1442 (aa)	XP_017367151	A0A2K5SH40
ENSCCAT00000057518	CPSF1-202	618	-	ENSCCAP00000039709	205 (aa)	-	A0A2K5SH46

Gene Model

Click here to download ENSCCAG00000037658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000037658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000037658	CPSF1	100	98.822	ENSG00000071894	CPSF1	100	98.822	Homo_sapiens
ENSCCAG00000037658	CPSF1	100	80.734	ENSAPOG00000019621	cpsf1	100	78.393	Acanthochromis_polyacanthus
ENSCCAG00000037658	CPSF1	97	94.925	ENSAMEG00000005557	CPSF1	100	94.925	Ailuropoda_melanoleuca
ENSCCAG00000037658	CPSF1	100	79.817	ENSACIG00000006112	cpsf1	100	78.478	Amphilophus_citrinellus
ENSCCAG00000037658	CPSF1	100	80.734	ENSAOCG00000007120	cpsf1	100	79.876	Amphiprion_ocellaris
ENSCCAG00000037658	CPSF1	100	80.734	ENSAPEG00000005755	cpsf1	100	80.083	Amphiprion_percula
ENSCCAG00000037658	CPSF1	100	80.275	ENSATEG00000011097	cpsf1	100	78.220	Anabas_testudineus
ENSCCAG00000037658	CPSF1	93	81.696	ENSACAG00000009655	CPSF1	100	81.696	Anolis_carolinensis
ENSCCAG00000037658	CPSF1	100	99.653	ENSANAG00000036514	CPSF1	100	99.653	Aotus_nancymaae
ENSCCAG00000037658	CPSF1	100	79.358	ENSACLG00000012231	cpsf1	99	79.029	Astatotilapia_calliptera
ENSCCAG00000037658	CPSF1	100	79.817	ENSAMXG00000008485	cpsf1	100	74.084	Astyanax_mexicanus
ENSCCAG00000037658	CPSF1	100	94.762	ENSBTAG00000008355	CPSF1	100	94.960	Bos_taurus
ENSCCAG00000037658	CPSF1	100	32.299	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSCCAG00000037658	CPSF1	100	99.584	ENSCJAG00000021421	CPSF1	100	99.584	Callithrix_jacchus
ENSCCAG00000037658	CPSF1	97	96.212	ENSCAFG00000001600	CPSF1	100	96.570	Canis_familiaris
ENSCCAG00000037658	CPSF1	100	96.471	ENSCAFG00020020821	CPSF1	100	96.471	Canis_lupus_dingo
ENSCCAG00000037658	CPSF1	100	91.041	ENSCHIG00000015833	CPSF1	100	91.041	Capra_hircus
ENSCCAG00000037658	CPSF1	100	98.128	ENSTSYG00000028560	CPSF1	99	99.415	Carlito_syrichta
ENSCCAG00000037658	CPSF1	97	95.412	ENSCAPG00000014921	CPSF1	99	95.412	Cavia_aperea
ENSCCAG00000037658	CPSF1	100	95.080	ENSCPOG00000011448	CPSF1	100	95.080	Cavia_porcellus
ENSCCAG00000037658	CPSF1	100	98.890	ENSCATG00000037234	CPSF1	100	98.890	Cercocebus_atys
ENSCCAG00000037658	CPSF1	100	96.741	ENSCLAG00000012166	CPSF1	100	96.741	Chinchilla_lanigera
ENSCCAG00000037658	CPSF1	100	98.890	ENSCSAG00000008502	CPSF1	100	98.890	Chlorocebus_sabaeus
ENSCCAG00000037658	CPSF1	99	87.544	ENSCPBG00000018910	CPSF1	96	87.544	Chrysemys_picta_bellii
ENSCCAG00000037658	CPSF1	96	48.637	ENSCING00000000514	-	100	48.565	Ciona_intestinalis
ENSCCAG00000037658	CPSF1	99	48.008	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSCCAG00000037658	CPSF1	100	96.098	ENSCANG00000032760	CPSF1	100	96.098	Colobus_angolensis_palliatus
ENSCCAG00000037658	CPSF1	100	96.602	ENSCGRG00001016344	Cpsf1	100	96.602	Cricetulus_griseus_chok1gshd
ENSCCAG00000037658	CPSF1	100	94.521	ENSCGRG00000003118	Cpsf1	100	94.521	Cricetulus_griseus_crigri
ENSCCAG00000037658	CPSF1	100	77.701	ENSCSEG00000013464	cpsf1	100	77.839	Cynoglossus_semilaevis
ENSCCAG00000037658	CPSF1	100	80.488	ENSCVAG00000014059	cpsf1	100	80.488	Cyprinodon_variegatus
ENSCCAG00000037658	CPSF1	100	79.752	ENSDARG00000034178	cpsf1	100	79.821	Danio_rerio
ENSCCAG00000037658	CPSF1	57	95.942	ENSDNOG00000043654	CPSF1	94	95.942	Dasypus_novemcinctus
ENSCCAG00000037658	CPSF1	97	95.914	ENSDORG00000006278	Cpsf1	99	95.914	Dipodomys_ordii
ENSCCAG00000037658	CPSF1	100	45.595	FBgn0024698	Cpsf160	100	45.491	Drosophila_melanogaster
ENSCCAG00000037658	CPSF1	80	97.315	ENSETEG00000006022	CPSF1	83	97.315	Echinops_telfairi
ENSCCAG00000037658	CPSF1	90	62.626	ENSEBUG00000006844	-	97	74.541	Eptatretus_burgeri
ENSCCAG00000037658	CPSF1	100	97.024	ENSEASG00005010774	CPSF1	100	97.024	Equus_asinus_asinus
ENSCCAG00000037658	CPSF1	100	97.024	ENSECAG00000022209	CPSF1	100	97.024	Equus_caballus
ENSCCAG00000037658	CPSF1	100	94.948	ENSEEUG00000000471	CPSF1	100	94.948	Erinaceus_europaeus
ENSCCAG00000037658	CPSF1	100	79.817	ENSELUG00000012271	cpsf1	100	78.767	Esox_lucius
ENSCCAG00000037658	CPSF1	100	96.810	ENSFDAG00000016060	CPSF1	100	96.810	Fukomys_damarensis
ENSCCAG00000037658	CPSF1	100	76.860	ENSFHEG00000016801	cpsf1	100	76.928	Fundulus_heteroclitus
ENSCCAG00000037658	CPSF1	100	78.899	ENSGMOG00000000796	cpsf1	100	78.498	Gadus_morhua
ENSCCAG00000037658	CPSF1	95	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSCCAG00000037658	CPSF1	100	79.358	ENSGACG00000008703	cpsf1	100	78.875	Gasterosteus_aculeatus
ENSCCAG00000037658	CPSF1	100	83.817	ENSGAGG00000004276	CPSF1	98	87.500	Gopherus_agassizii
ENSCCAG00000037658	CPSF1	100	99.029	ENSGGOG00000016185	CPSF1	100	99.029	Gorilla_gorilla
ENSCCAG00000037658	CPSF1	100	63.942	ENSGGOG00000040487	-	100	70.833	Gorilla_gorilla
ENSCCAG00000037658	CPSF1	100	79.792	ENSHBUG00000018900	cpsf1	100	80.069	Haplochromis_burtoni
ENSCCAG00000037658	CPSF1	100	96.671	ENSHGLG00000016139	CPSF1	100	96.671	Heterocephalus_glaber_female
ENSCCAG00000037658	CPSF1	100	96.602	ENSHGLG00100009750	CPSF1	100	96.602	Heterocephalus_glaber_male
ENSCCAG00000037658	CPSF1	100	77.982	ENSHCOG00000018509	cpsf1	100	77.001	Hippocampus_comes
ENSCCAG00000037658	CPSF1	100	80.275	ENSIPUG00000011259	cpsf1	100	76.632	Ictalurus_punctatus
ENSCCAG00000037658	CPSF1	97	96.643	ENSSTOG00000009957	CPSF1	99	96.643	Ictidomys_tridecemlineatus
ENSCCAG00000037658	CPSF1	100	96.533	ENSJJAG00000023002	Cpsf1	100	96.533	Jaculus_jaculus
ENSCCAG00000037658	CPSF1	91	85.893	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSCCAG00000037658	CPSF1	100	78.899	ENSLBEG00000003601	cpsf1	100	77.893	Labrus_bergylta
ENSCCAG00000037658	CPSF1	100	81.651	ENSLACG00000000233	CPSF1	92	81.250	Latimeria_chalumnae
ENSCCAG00000037658	CPSF1	100	81.818	ENSLOCG00000008484	cpsf1	100	78.468	Lepisosteus_oculatus
ENSCCAG00000037658	CPSF1	97	95.351	ENSLAFG00000022601	CPSF1	100	95.351	Loxodonta_africana
ENSCCAG00000037658	CPSF1	100	98.890	ENSMFAG00000037013	CPSF1	100	98.890	Macaca_fascicularis
ENSCCAG00000037658	CPSF1	100	98.960	ENSMMUG00000007380	CPSF1	100	98.960	Macaca_mulatta
ENSCCAG00000037658	CPSF1	97	99.067	ENSMNEG00000043564	CPSF1	100	99.067	Macaca_nemestrina
ENSCCAG00000037658	CPSF1	100	98.890	ENSMLEG00000043010	CPSF1	100	98.890	Mandrillus_leucophaeus
ENSCCAG00000037658	CPSF1	100	80.275	ENSMAMG00000003803	cpsf1	100	78.663	Mastacembelus_armatus
ENSCCAG00000037658	CPSF1	100	79.358	ENSMZEG00005001168	cpsf1	100	77.785	Maylandia_zebra
ENSCCAG00000037658	CPSF1	100	96.394	ENSMAUG00000003601	Cpsf1	100	96.394	Mesocricetus_auratus
ENSCCAG00000037658	CPSF1	100	97.642	ENSMICG00000015767	CPSF1	100	97.642	Microcebus_murinus
ENSCCAG00000037658	CPSF1	100	96.602	ENSMOCG00000022758	Cpsf1	100	96.602	Microtus_ochrogaster
ENSCCAG00000037658	CPSF1	100	78.976	ENSMMOG00000021245	cpsf1	100	79.391	Mola_mola
ENSCCAG00000037658	CPSF1	100	93.103	ENSMODG00000010755	CPSF1	100	93.103	Monodelphis_domestica
ENSCCAG00000037658	CPSF1	100	79.358	ENSMALG00000020545	cpsf1	100	77.958	Monopterus_albus
ENSCCAG00000037658	CPSF1	100	96.810	MGP_CAROLIEiJ_G0019936	Cpsf1	100	96.810	Mus_caroli
ENSCCAG00000037658	CPSF1	100	96.741	ENSMUSG00000034022	Cpsf1	100	96.741	Mus_musculus
ENSCCAG00000037658	CPSF1	100	96.671	MGP_PahariEiJ_G0019946	Cpsf1	100	96.671	Mus_pahari
ENSCCAG00000037658	CPSF1	100	96.741	MGP_SPRETEiJ_G0020839	Cpsf1	100	96.741	Mus_spretus
ENSCCAG00000037658	CPSF1	94	95.704	ENSMPUG00000006419	CPSF1	93	95.704	Mustela_putorius_furo
ENSCCAG00000037658	CPSF1	77	97.468	ENSMLUG00000000667	-	100	96.667	Myotis_lucifugus
ENSCCAG00000037658	CPSF1	100	96.463	ENSNGAG00000022460	Cpsf1	100	96.463	Nannospalax_galili
ENSCCAG00000037658	CPSF1	100	79.358	ENSNBRG00000000813	cpsf1	100	74.965	Neolamprologus_brichardi
ENSCCAG00000037658	CPSF1	100	95.610	ENSNLEG00000010633	-	100	95.610	Nomascus_leucogenys
ENSCCAG00000037658	CPSF1	84	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSCCAG00000037658	CPSF1	61	97.449	ENSOPRG00000004693	-	71	97.449	Ochotona_princeps
ENSCCAG00000037658	CPSF1	100	97.018	ENSODEG00000013995	CPSF1	100	97.018	Octodon_degus
ENSCCAG00000037658	CPSF1	100	80.138	ENSONIG00000007676	cpsf1	100	80.346	Oreochromis_niloticus
ENSCCAG00000037658	CPSF1	58	91.429	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSCCAG00000037658	CPSF1	100	77.982	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSCCAG00000037658	CPSF1	100	77.982	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSCCAG00000037658	CPSF1	100	77.982	ENSORLG00015009979	cpsf1	100	77.566	Oryzias_latipes_hsok
ENSCCAG00000037658	CPSF1	100	77.982	ENSOMEG00000011849	cpsf1	100	77.876	Oryzias_melastigma
ENSCCAG00000037658	CPSF1	100	97.781	ENSOGAG00000000315	CPSF1	100	97.781	Otolemur_garnettii
ENSCCAG00000037658	CPSF1	100	99.098	ENSPPAG00000019280	CPSF1	100	99.098	Pan_paniscus
ENSCCAG00000037658	CPSF1	100	99.098	ENSPTRG00000049288	-	100	99.098	Pan_troglodytes
ENSCCAG00000037658	CPSF1	100	62.981	ENSPTRG00000052516	-	100	69.444	Pan_troglodytes
ENSCCAG00000037658	CPSF1	100	97.410	ENSPTRG00000051253	-	100	97.410	Pan_troglodytes
ENSCCAG00000037658	CPSF1	97	98.924	ENSPANG00000015005	CPSF1	100	98.924	Papio_anubis
ENSCCAG00000037658	CPSF1	100	81.651	ENSPKIG00000002582	cpsf1	100	81.653	Paramormyrops_kingsleyae
ENSCCAG00000037658	CPSF1	100	76.147	ENSPMGG00000022177	-	100	84.259	Periophthalmus_magnuspinnatus
ENSCCAG00000037658	CPSF1	100	93.034	ENSPCIG00000009035	CPSF1	100	93.034	Phascolarctos_cinereus
ENSCCAG00000037658	CPSF1	100	76.606	ENSPFOG00000012870	cpsf1	100	76.658	Poecilia_formosa
ENSCCAG00000037658	CPSF1	100	76.335	ENSPREG00000016307	cpsf1	100	76.475	Poecilia_reticulata
ENSCCAG00000037658	CPSF1	100	90.915	ENSPPYG00000018973	CPSF1	100	90.915	Pongo_abelii
ENSCCAG00000037658	CPSF1	91	94.886	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSCCAG00000037658	CPSF1	100	93.832	ENSPCOG00000020001	CPSF1	100	93.832	Propithecus_coquereli
ENSCCAG00000037658	CPSF1	91	98.571	ENSPVAG00000006761	CPSF1	91	98.571	Pteropus_vampyrus
ENSCCAG00000037658	CPSF1	100	79.358	ENSPNYG00000004906	cpsf1	100	79.030	Pundamilia_nyererei
ENSCCAG00000037658	CPSF1	100	75.345	ENSPNAG00000024395	cpsf1	100	75.345	Pygocentrus_nattereri
ENSCCAG00000037658	CPSF1	100	96.741	ENSRNOG00000030705	Cpsf1	100	96.741	Rattus_norvegicus
ENSCCAG00000037658	CPSF1	100	98.821	ENSRBIG00000044907	CPSF1	100	98.821	Rhinopithecus_bieti
ENSCCAG00000037658	CPSF1	100	98.752	ENSRROG00000044861	CPSF1	100	98.752	Rhinopithecus_roxellana
ENSCCAG00000037658	CPSF1	97	99.570	ENSSBOG00000027177	CPSF1	100	99.570	Saimiri_boliviensis_boliviensis
ENSCCAG00000037658	CPSF1	100	92.759	ENSSHAG00000006500	CPSF1	100	92.759	Sarcophilus_harrisii
ENSCCAG00000037658	CPSF1	100	82.110	ENSSFOG00015004606	cpsf1	100	81.600	Scleropages_formosus
ENSCCAG00000037658	CPSF1	100	80.734	ENSSMAG00000020547	cpsf1	100	78.011	Scophthalmus_maximus
ENSCCAG00000037658	CPSF1	100	80.275	ENSSDUG00000001100	cpsf1	100	79.682	Seriola_dumerili
ENSCCAG00000037658	CPSF1	100	80.275	ENSSLDG00000003619	cpsf1	100	79.876	Seriola_lalandi_dorsalis
ENSCCAG00000037658	CPSF1	89	97.917	ENSSARG00000003643	CPSF1	92	97.917	Sorex_araneus
ENSCCAG00000037658	CPSF1	100	88.293	ENSSPUG00000014396	CPSF1	100	88.293	Sphenodon_punctatus
ENSCCAG00000037658	CPSF1	100	80.275	ENSSPAG00000005349	cpsf1	100	78.581	Stegastes_partitus
ENSCCAG00000037658	CPSF1	100	96.055	ENSSSCG00000005906	CPSF1	100	96.055	Sus_scrofa
ENSCCAG00000037658	CPSF1	100	77.064	ENSTRUG00000013134	cpsf1	99	78.252	Takifugu_rubripes
ENSCCAG00000037658	CPSF1	100	78.929	ENSTNIG00000014027	cpsf1	100	78.998	Tetraodon_nigroviridis
ENSCCAG00000037658	CPSF1	77	89.138	ENSTBEG00000001756	CPSF1	91	89.138	Tupaia_belangeri
ENSCCAG00000037658	CPSF1	100	88.532	ENSTTRG00000001937	CPSF1	90	96.718	Tursiops_truncatus
ENSCCAG00000037658	CPSF1	97	96.640	ENSUAMG00000006476	CPSF1	98	96.640	Ursus_americanus
ENSCCAG00000037658	CPSF1	67	52.941	ENSVPAG00000000157	-	50	94.949	Vicugna_pacos
ENSCCAG00000037658	CPSF1	100	94.634	ENSVVUG00000005940	-	100	94.634	Vulpes_vulpes
ENSCCAG00000037658	CPSF1	100	77.663	ENSXCOG00000003608	cpsf1	100	77.939	Xiphophorus_couchianus
ENSCCAG00000037658	CPSF1	100	77.141	ENSXMAG00000005798	cpsf1	100	77.417	Xiphophorus_maculatus