EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000037859 (Gene tree)
Gene ID: 108306933
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 11594 bases
Position: chrKV389501.1:2929126-2940719
Accession: 108306933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000040139	SAP	PF02037.27	3.5e-10	1	1
ENSCCAP00000040136	SAP	PF02037.27	3.7e-10	1	1
ENSCCAP00000040135	SAP	PF02037.27	4e-10	1	1
ENSCCAP00000040132	SAP	PF02037.27	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000057949	-	2172	-	ENSCCAP00000040139	723 (aa)	-	A0A2K5SIC5
ENSCCAT00000057942	-	3952	XM_017532095	ENSCCAP00000040132	825 (aa)	XP_017387584	A0A2K5SIC6
ENSCCAT00000057951	-	1638	-	ENSCCAP00000040141	546 (aa)	-	A0A2K5SID4
ENSCCAT00000057945	-	2385	XM_017532096	ENSCCAP00000040135	794 (aa)	XP_017387585	A0A2K5SIC8
ENSCCAT00000057946	-	2235	-	ENSCCAP00000040136	744 (aa)	-	A0A2K5SID0

Gene Model

Click here to download ENSCCAG00000037859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000037859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000037859	-	77	44.876	ENSCCAG00000037674	-	66	47.421
ENSCCAG00000037859	-	85	50.240	ENSCCAG00000038049	HNRNPUL1	66	54.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000037859	-	100	99.636	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCCAG00000037859	-	79	77.083	ENSAPOG00000017400	hnrnpub	87	77.083	Acanthochromis_polyacanthus
ENSCCAG00000037859	-	99	98.499	ENSAMEG00000009145	HNRNPU	100	94.794	Ailuropoda_melanoleuca
ENSCCAG00000037859	-	98	56.276	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSCCAG00000037859	-	79	75.000	ENSAOCG00000015843	hnrnpub	89	61.538	Amphiprion_ocellaris
ENSCCAG00000037859	-	79	75.000	ENSAPEG00000014679	hnrnpub	89	61.538	Amphiprion_percula
ENSCCAG00000037859	-	98	56.155	ENSATEG00000016178	hnrnpub	92	54.443	Anabas_testudineus
ENSCCAG00000037859	-	80	88.519	ENSACAG00000004511	HNRNPU	79	82.333	Anolis_carolinensis
ENSCCAG00000037859	-	100	99.862	ENSANAG00000033895	-	100	99.862	Aotus_nancymaae
ENSCCAG00000037859	-	78	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSCCAG00000037859	-	100	98.667	ENSBTAG00000007606	HNRNPU	100	98.667	Bos_taurus
ENSCCAG00000037859	-	100	99.585	ENSCJAG00000016914	HNRNPU	100	99.585	Callithrix_jacchus
ENSCCAG00000037859	-	100	96.898	ENSCAFG00020000918	HNRNPU	100	96.898	Canis_lupus_dingo
ENSCCAG00000037859	-	100	97.395	ENSCHIG00000004900	HNRNPU	100	97.395	Capra_hircus
ENSCCAG00000037859	-	100	97.576	ENSCPOG00000011887	HNRNPU	100	97.576	Cavia_porcellus
ENSCCAG00000037859	-	100	99.723	ENSCATG00000035273	HNRNPU	100	99.723	Cercocebus_atys
ENSCCAG00000037859	-	100	97.818	ENSCLAG00000007100	HNRNPU	100	97.818	Chinchilla_lanigera
ENSCCAG00000037859	-	100	98.139	ENSCSAG00000009219	HNRNPU	100	98.139	Chlorocebus_sabaeus
ENSCCAG00000037859	-	84	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSCCAG00000037859	-	97	87.523	ENSCPBG00000009415	HNRNPU	88	91.129	Chrysemys_picta_bellii
ENSCCAG00000037859	-	100	98.349	ENSCANG00000022780	HNRNPU	100	98.349	Colobus_angolensis_palliatus
ENSCCAG00000037859	-	99	98.496	ENSCGRG00001020525	Hnrnpu	100	96.130	Cricetulus_griseus_chok1gshd
ENSCCAG00000037859	-	94	54.278	ENSCSEG00000010804	hnrnpub	89	64.062	Cynoglossus_semilaevis
ENSCCAG00000037859	-	82	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSCCAG00000037859	-	81	62.319	ENSDARG00000015206	hnrnpua	94	59.164	Danio_rerio
ENSCCAG00000037859	-	80	85.714	ENSDARG00000004735	hnrnpub	94	57.511	Danio_rerio
ENSCCAG00000037859	-	81	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSCCAG00000037859	-	100	91.407	ENSDORG00000015491	Hnrnpu	100	91.656	Dipodomys_ordii
ENSCCAG00000037859	-	96	98.308	ENSETEG00000014565	HNRNPU	100	91.935	Echinops_telfairi
ENSCCAG00000037859	-	100	96.898	ENSEASG00005003017	HNRNPU	100	96.898	Equus_asinus_asinus
ENSCCAG00000037859	-	100	96.774	ENSECAG00000007955	HNRNPU	100	96.774	Equus_caballus
ENSCCAG00000037859	-	98	57.629	ENSELUG00000010733	hnrnpub	82	57.162	Esox_lucius
ENSCCAG00000037859	-	99	50.685	ENSELUG00000011966	hnrnpua	67	72.482	Esox_lucius
ENSCCAG00000037859	-	100	98.253	ENSFCAG00000002156	HNRNPU	100	98.253	Felis_catus
ENSCCAG00000037859	-	99	93.825	ENSFDAG00000006026	HNRNPU	100	98.653	Fukomys_damarensis
ENSCCAG00000037859	-	80	69.643	ENSFHEG00000022639	hnrnpub	88	69.643	Fundulus_heteroclitus
ENSCCAG00000037859	-	92	57.246	ENSGMOG00000001755	hnrnpub	77	60.561	Gadus_morhua
ENSCCAG00000037859	-	96	88.715	ENSGALG00000010671	HNRNPU	100	77.476	Gallus_gallus
ENSCCAG00000037859	-	79	78.261	ENSGAFG00000009369	hnrnpub	84	78.261	Gambusia_affinis
ENSCCAG00000037859	-	78	74.000	ENSGACG00000004679	hnrnpub	99	53.398	Gasterosteus_aculeatus
ENSCCAG00000037859	-	100	99.170	ENSGGOG00000004061	HNRNPU	100	99.170	Gorilla_gorilla
ENSCCAG00000037859	-	78	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSCCAG00000037859	-	100	96.638	ENSHGLG00000010594	-	100	96.638	Heterocephalus_glaber_female
ENSCCAG00000037859	-	90	98.992	ENSHGLG00100015093	HNRNPU	100	98.992	Heterocephalus_glaber_male
ENSCCAG00000037859	-	77	83.333	ENSHCOG00000020091	hnrnpub	83	79.545	Hippocampus_comes
ENSCCAG00000037859	-	80	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSCCAG00000037859	-	99	98.684	ENSJJAG00000011371	Hnrnpu	100	96.252	Jaculus_jaculus
ENSCCAG00000037859	-	95	52.934	ENSKMAG00000004532	hnrnpub	88	59.155	Kryptolebias_marmoratus
ENSCCAG00000037859	-	82	58.667	ENSLBEG00000022520	hnrnpub	87	61.194	Labrus_bergylta
ENSCCAG00000037859	-	99	63.197	ENSLACG00000017463	HNRNPU	99	62.687	Latimeria_chalumnae
ENSCCAG00000037859	-	82	80.435	ENSLOCG00000016652	hnrnpua	99	57.459	Lepisosteus_oculatus
ENSCCAG00000037859	-	100	97.576	ENSLAFG00000021377	HNRNPU	100	97.576	Loxodonta_africana
ENSCCAG00000037859	-	100	99.723	ENSMFAG00000037308	HNRNPU	100	99.723	Macaca_fascicularis
ENSCCAG00000037859	-	100	98.999	ENSMMUG00000021098	HNRNPU	100	98.999	Macaca_mulatta
ENSCCAG00000037859	-	100	99.723	ENSMNEG00000043645	HNRNPU	100	99.723	Macaca_nemestrina
ENSCCAG00000037859	-	79	73.077	ENSMAMG00000007196	hnrnpub	86	73.077	Mastacembelus_armatus
ENSCCAG00000037859	-	78	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSCCAG00000037859	-	100	96.130	ENSMAUG00000008842	Hnrnpu	100	96.130	Mesocricetus_auratus
ENSCCAG00000037859	-	100	98.545	ENSMICG00000004616	HNRNPU	100	98.545	Microcebus_murinus
ENSCCAG00000037859	-	99	98.308	ENSMOCG00000015623	Hnrnpu	100	96.005	Microtus_ochrogaster
ENSCCAG00000037859	-	100	90.824	ENSMODG00000006515	HNRNPU	100	92.706	Monodelphis_domestica
ENSCCAG00000037859	-	76	70.588	ENSMALG00000018243	hnrnpub	84	61.149	Monopterus_albus
ENSCCAG00000037859	-	100	96.259	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.259	Mus_caroli
ENSCCAG00000037859	-	100	96.384	ENSMUSG00000039630	Hnrnpu	100	96.384	Mus_musculus
ENSCCAG00000037859	-	99	97.368	MGP_PahariEiJ_G0028193	Hnrnpu	100	95.517	Mus_pahari
ENSCCAG00000037859	-	100	96.384	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.384	Mus_spretus
ENSCCAG00000037859	-	92	96.998	ENSMLUG00000000475	HNRNPU	100	88.243	Myotis_lucifugus
ENSCCAG00000037859	-	100	96.380	ENSNGAG00000019075	Hnrnpu	100	96.380	Nannospalax_galili
ENSCCAG00000037859	-	78	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSCCAG00000037859	-	99	87.923	ENSMEUG00000000541	HNRNPU	100	89.734	Notamacropus_eugenii
ENSCCAG00000037859	-	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSCCAG00000037859	-	78	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSCCAG00000037859	-	98	98.515	ENSOCUG00000014469	HNRNPU	93	98.515	Oryctolagus_cuniculus
ENSCCAG00000037859	-	79	78.261	ENSORLG00000016114	hnrnpub	86	83.333	Oryzias_latipes
ENSCCAG00000037859	-	79	78.261	ENSORLG00020005363	hnrnpub	86	83.333	Oryzias_latipes_hni
ENSCCAG00000037859	-	79	78.261	ENSORLG00015001190	hnrnpub	86	83.333	Oryzias_latipes_hsok
ENSCCAG00000037859	-	79	78.261	ENSOMEG00000014951	hnrnpub	86	83.333	Oryzias_melastigma
ENSCCAG00000037859	-	100	97.022	ENSOGAG00000014024	HNRNPU	100	97.022	Otolemur_garnettii
ENSCCAG00000037859	-	83	100.000	ENSOARG00000004985	HNRNPU	95	98.658	Ovis_aries
ENSCCAG00000037859	-	100	99.723	ENSPPAG00000038652	HNRNPU	100	99.723	Pan_paniscus
ENSCCAG00000037859	-	100	98.424	ENSPPRG00000002662	HNRNPU	100	98.424	Panthera_pardus
ENSCCAG00000037859	-	100	99.723	ENSPTRG00000002182	HNRNPU	100	99.723	Pan_troglodytes
ENSCCAG00000037859	-	100	99.723	ENSPANG00000011643	HNRNPU	100	99.723	Papio_anubis
ENSCCAG00000037859	-	98	60.822	ENSPKIG00000022332	hnrnpub	85	71.698	Paramormyrops_kingsleyae
ENSCCAG00000037859	-	78	80.851	ENSPKIG00000006885	hnrnpua	93	58.855	Paramormyrops_kingsleyae
ENSCCAG00000037859	-	100	93.914	ENSPCIG00000008657	HNRNPU	100	94.033	Phascolarctos_cinereus
ENSCCAG00000037859	-	81	64.062	ENSPFOG00000002908	hnrnpub	89	60.811	Poecilia_formosa
ENSCCAG00000037859	-	81	64.062	ENSPLAG00000004160	hnrnpub	89	60.811	Poecilia_latipinna
ENSCCAG00000037859	-	100	92.432	ENSPCOG00000003883	-	100	92.804	Propithecus_coquereli
ENSCCAG00000037859	-	100	98.667	ENSPCOG00000018655	-	100	98.667	Propithecus_coquereli
ENSCCAG00000037859	-	100	98.182	ENSPVAG00000002581	HNRNPU	100	98.182	Pteropus_vampyrus
ENSCCAG00000037859	-	78	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSCCAG00000037859	-	98	61.351	ENSPNAG00000001055	hnrnpub	86	61.043	Pygocentrus_nattereri
ENSCCAG00000037859	-	100	96.005	ENSRNOG00000033790	Hnrnpu	100	96.005	Rattus_norvegicus
ENSCCAG00000037859	-	100	98.755	ENSRBIG00000031519	HNRNPU	100	98.755	Rhinopithecus_bieti
ENSCCAG00000037859	-	100	98.900	ENSRROG00000041642	HNRNPU	100	98.900	Rhinopithecus_roxellana
ENSCCAG00000037859	-	98	61.622	ENSSFOG00015001124	hnrnpub	78	65.528	Scleropages_formosus
ENSCCAG00000037859	-	98	61.104	ENSSFOG00015019004	hnrnpu	88	62.092	Scleropages_formosus
ENSCCAG00000037859	-	76	61.525	ENSSMAG00000003607	hnrnpub	95	57.515	Scophthalmus_maximus
ENSCCAG00000037859	-	79	70.588	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSCCAG00000037859	-	79	70.588	ENSSLDG00000004899	hnrnpub	85	70.588	Seriola_lalandi_dorsalis
ENSCCAG00000037859	-	97	90.619	ENSSPUG00000011393	HNRNPU	90	90.244	Sphenodon_punctatus
ENSCCAG00000037859	-	73	78.261	ENSSPAG00000011853	hnrnpub	86	78.261	Stegastes_partitus
ENSCCAG00000037859	-	100	98.909	ENSSSCG00000010877	HNRNPU	100	98.909	Sus_scrofa
ENSCCAG00000037859	-	99	55.405	ENSTRUG00000007759	hnrnpub	85	64.706	Takifugu_rubripes
ENSCCAG00000037859	-	99	51.507	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSCCAG00000037859	-	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSCCAG00000037859	-	100	98.667	ENSUAMG00000021120	HNRNPU	100	98.667	Ursus_americanus
ENSCCAG00000037859	-	98	89.510	ENSUMAG00000012322	HNRNPU	98	96.396	Ursus_maritimus
ENSCCAG00000037859	-	86	98.198	ENSVPAG00000010520	HNRNPU	91	98.198	Vicugna_pacos
ENSCCAG00000037859	-	100	96.898	ENSVVUG00000026524	HNRNPU	100	96.898	Vulpes_vulpes
ENSCCAG00000037859	-	99	75.949	ENSXETG00000011386	hnrnpu	99	69.890	Xenopus_tropicalis
ENSCCAG00000037859	-	99	46.282	ENSXMAG00000010356	hnrnpub	97	78.261	Xiphophorus_maculatus