EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000037881 (Gene tree)
Gene ID: 108310278
Gene Symbol: SF1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 14710 bases
Position: chrKV389528.1:3763013-3777722
Accession: 108310278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000040184	KH_1	PF00013.29	1.9e-07	1	1
ENSCCAP00000040186	KH_1	PF00013.29	1.9e-07	1	1
ENSCCAP00000040185	KH_1	PF00013.29	3.8e-07	1	1
ENSCCAP00000040177	KH_1	PF00013.29	3.9e-07	1	1
ENSCCAP00000040181	KH_1	PF00013.29	4e-07	1	1
ENSCCAP00000040174	KH_1	PF00013.29	4.2e-07	1	1
ENSCCAP00000040186	zf-CCHC	PF00098.23	0.00017	1	1
ENSCCAP00000040184	zf-CCHC	PF00098.23	0.00017	1	1
ENSCCAP00000040185	zf-CCHC	PF00098.23	0.00025	1	1
ENSCCAP00000040177	zf-CCHC	PF00098.23	0.00026	1	1
ENSCCAP00000040181	zf-CCHC	PF00098.23	0.00027	1	1
ENSCCAP00000040174	zf-CCHC	PF00098.23	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000057989	SF1-202	3170	XM_017537187	ENSCCAP00000040177	638 (aa)	XP_017392676	A0A2K5SIG7
ENSCCAT00000057986	SF1-201	3718	XM_017537193	ENSCCAP00000040174	673 (aa)	XP_017392682	A0A2K5SIG2
ENSCCAT00000057993	SF1-203	1971	-	ENSCCAP00000040181	656 (aa)	-	A0A2K5SIH2
ENSCCAT00000057997	SF1-205	1908	-	ENSCCAP00000040185	635 (aa)	-	A0A2K5SII0
ENSCCAT00000057996	SF1-204	1257	-	ENSCCAP00000040184	418 (aa)	-	A0A2K5SIH4
ENSCCAT00000057999	SF1-207	333	-	ENSCCAP00000040187	110 (aa)	-	A0A2K5SIH6
ENSCCAT00000057998	SF1-206	1275	-	ENSCCAP00000040186	424 (aa)	-	A0A2K5SIH7

Gene Model

Click here to download ENSCCAG00000037881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000037881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000037881	SF1	99	86.091	ENSCCAG00000023781	-	94	85.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000037881	SF1	90	80.928	ENSAPOG00000012341	sf1	61	75.991	Acanthochromis_polyacanthus
ENSCCAG00000037881	SF1	94	99.749	ENSAMEG00000017828	SF1	100	91.756	Ailuropoda_melanoleuca
ENSCCAG00000037881	SF1	89	82.713	ENSACIG00000016514	sf1	63	77.751	Amphilophus_citrinellus
ENSCCAG00000037881	SF1	90	80.412	ENSAOCG00000010934	sf1	61	76.056	Amphiprion_ocellaris
ENSCCAG00000037881	SF1	90	80.412	ENSAPEG00000009498	sf1	61	76.056	Amphiprion_percula
ENSCCAG00000037881	SF1	89	81.579	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSCCAG00000037881	SF1	96	87.255	ENSANAG00000022607	-	99	86.622	Aotus_nancymaae
ENSCCAG00000037881	SF1	100	99.843	ENSANAG00000026664	-	100	99.843	Aotus_nancymaae
ENSCCAG00000037881	SF1	88	84.282	ENSACLG00000007633	sf1	61	82.045	Astatotilapia_calliptera
ENSCCAG00000037881	SF1	88	85.829	ENSAMXG00000003630	sf1	53	80.488	Astyanax_mexicanus
ENSCCAG00000037881	SF1	96	100.000	ENSBTAG00000001035	SF1	94	99.666	Bos_taurus
ENSCCAG00000037881	SF1	100	100.000	ENSCJAG00000002780	SF1	100	100.000	Callithrix_jacchus
ENSCCAG00000037881	SF1	100	100.000	ENSCAFG00000014239	SF1	100	100.000	Canis_familiaris
ENSCCAG00000037881	SF1	100	100.000	ENSCAFG00020014381	SF1	100	100.000	Canis_lupus_dingo
ENSCCAG00000037881	SF1	96	100.000	ENSCHIG00000025867	SF1	98	100.000	Capra_hircus
ENSCCAG00000037881	SF1	82	98.925	ENSTSYG00000033618	SF1	98	98.925	Carlito_syrichta
ENSCCAG00000037881	SF1	93	99.495	ENSCAPG00000010762	SF1	87	98.636	Cavia_aperea
ENSCCAG00000037881	SF1	98	99.522	ENSCPOG00000012290	SF1	100	99.628	Cavia_porcellus
ENSCCAG00000037881	SF1	100	100.000	ENSCATG00000011564	SF1	100	100.000	Cercocebus_atys
ENSCCAG00000037881	SF1	96	100.000	ENSCSAG00000007258	SF1	98	100.000	Chlorocebus_sabaeus
ENSCCAG00000037881	SF1	89	93.122	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSCCAG00000037881	SF1	96	88.480	ENSCPBG00000023763	SF1	66	85.300	Chrysemys_picta_bellii
ENSCCAG00000037881	SF1	86	59.946	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSCCAG00000037881	SF1	86	59.137	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSCCAG00000037881	SF1	100	100.000	ENSCANG00000042201	SF1	100	100.000	Colobus_angolensis_palliatus
ENSCCAG00000037881	SF1	96	99.263	ENSCGRG00001003677	Sf1	100	94.640	Cricetulus_griseus_chok1gshd
ENSCCAG00000037881	SF1	93	99.242	ENSCGRG00000001708	Sf1	99	99.255	Cricetulus_griseus_crigri
ENSCCAG00000037881	SF1	93	78.079	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSCCAG00000037881	SF1	89	84.324	ENSCVAG00000001670	sf1	63	80.846	Cyprinodon_variegatus
ENSCCAG00000037881	SF1	94	81.390	ENSDARG00000008188	sf1	90	80.095	Danio_rerio
ENSCCAG00000037881	SF1	96	99.263	ENSDNOG00000001282	SF1	98	99.442	Dasypus_novemcinctus
ENSCCAG00000037881	SF1	100	99.843	ENSDORG00000016334	Sf1	100	99.843	Dipodomys_ordii
ENSCCAG00000037881	SF1	93	89.394	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSCCAG00000037881	SF1	96	99.509	ENSEASG00005018272	SF1	98	99.628	Equus_asinus_asinus
ENSCCAG00000037881	SF1	96	99.754	ENSECAG00000024544	SF1	98	99.814	Equus_caballus
ENSCCAG00000037881	SF1	83	99.150	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSCCAG00000037881	SF1	88	81.432	ENSELUG00000013225	sf1	54	79.661	Esox_lucius
ENSCCAG00000037881	SF1	100	100.000	ENSFCAG00000012231	SF1	100	100.000	Felis_catus
ENSCCAG00000037881	SF1	93	100.000	ENSFDAG00000009833	SF1	99	92.006	Fukomys_damarensis
ENSCCAG00000037881	SF1	91	80.155	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSCCAG00000037881	SF1	79	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSCCAG00000037881	SF1	91	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSCCAG00000037881	SF1	92	80.000	ENSGACG00000000826	sf1	85	77.778	Gasterosteus_aculeatus
ENSCCAG00000037881	SF1	96	88.235	ENSGAGG00000021691	SF1	72	85.300	Gopherus_agassizii
ENSCCAG00000037881	SF1	89	82.895	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSCCAG00000037881	SF1	100	99.843	ENSHGLG00000009541	SF1	100	99.843	Heterocephalus_glaber_female
ENSCCAG00000037881	SF1	93	100.000	ENSHGLG00100013879	-	93	94.521	Heterocephalus_glaber_male
ENSCCAG00000037881	SF1	90	86.719	ENSHGLG00100008076	-	87	88.498	Heterocephalus_glaber_male
ENSCCAG00000037881	SF1	98	84.828	ENSHGLG00100008255	-	94	86.345	Heterocephalus_glaber_male
ENSCCAG00000037881	SF1	89	81.088	ENSHCOG00000011388	sf1	59	76.699	Hippocampus_comes
ENSCCAG00000037881	SF1	98	99.681	ENSSTOG00000009790	-	100	99.681	Ictidomys_tridecemlineatus
ENSCCAG00000037881	SF1	88	89.544	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSCCAG00000037881	SF1	100	99.687	ENSJJAG00000011788	Sf1	100	99.687	Jaculus_jaculus
ENSCCAG00000037881	SF1	91	81.841	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSCCAG00000037881	SF1	89	82.199	ENSLBEG00000019836	sf1	79	78.398	Labrus_bergylta
ENSCCAG00000037881	SF1	97	77.088	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSCCAG00000037881	SF1	88	85.294	ENSLOCG00000002130	sf1	57	84.946	Lepisosteus_oculatus
ENSCCAG00000037881	SF1	99	95.659	ENSLAFG00000007201	SF1	100	95.659	Loxodonta_africana
ENSCCAG00000037881	SF1	100	100.000	ENSMFAG00000033122	SF1	100	100.000	Macaca_fascicularis
ENSCCAG00000037881	SF1	100	100.000	ENSMMUG00000022606	SF1	100	100.000	Macaca_mulatta
ENSCCAG00000037881	SF1	100	100.000	ENSMNEG00000037901	SF1	100	100.000	Macaca_nemestrina
ENSCCAG00000037881	SF1	100	98.325	ENSMLEG00000040706	SF1	100	98.325	Mandrillus_leucophaeus
ENSCCAG00000037881	SF1	90	80.928	ENSMAMG00000001780	sf1	59	77.913	Mastacembelus_armatus
ENSCCAG00000037881	SF1	89	82.632	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSCCAG00000037881	SF1	100	99.216	ENSMAUG00000014064	Sf1	100	99.216	Mesocricetus_auratus
ENSCCAG00000037881	SF1	100	99.687	ENSMICG00000001202	SF1	100	99.687	Microcebus_murinus
ENSCCAG00000037881	SF1	100	99.216	ENSMOCG00000022038	Sf1	100	99.216	Microtus_ochrogaster
ENSCCAG00000037881	SF1	88	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSCCAG00000037881	SF1	94	98.492	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSCCAG00000037881	SF1	89	82.888	ENSMALG00000020521	sf1	68	78.818	Monopterus_albus
ENSCCAG00000037881	SF1	100	99.216	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSCCAG00000037881	SF1	100	99.216	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSCCAG00000037881	SF1	100	98.903	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSCCAG00000037881	SF1	100	99.216	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSCCAG00000037881	SF1	94	99.749	ENSMPUG00000012684	SF1	92	99.492	Mustela_putorius_furo
ENSCCAG00000037881	SF1	94	99.749	ENSMLUG00000015217	-	92	99.323	Myotis_lucifugus
ENSCCAG00000037881	SF1	96	95.577	ENSMLUG00000029800	-	90	88.113	Myotis_lucifugus
ENSCCAG00000037881	SF1	100	99.687	ENSNGAG00000005550	Sf1	100	99.687	Nannospalax_galili
ENSCCAG00000037881	SF1	88	84.282	ENSNBRG00000017606	sf1	60	81.796	Neolamprologus_brichardi
ENSCCAG00000037881	SF1	100	99.843	ENSNLEG00000005236	-	100	99.843	Nomascus_leucogenys
ENSCCAG00000037881	SF1	92	98.718	ENSMEUG00000013424	SF1	100	98.493	Notamacropus_eugenii
ENSCCAG00000037881	SF1	83	99.433	ENSOPRG00000005008	SF1	100	99.394	Ochotona_princeps
ENSCCAG00000037881	SF1	96	97.297	ENSODEG00000006102	-	100	91.463	Octodon_degus
ENSCCAG00000037881	SF1	89	82.895	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSCCAG00000037881	SF1	80	85.131	ENSOANG00000002909	SF1	99	86.567	Ornithorhynchus_anatinus
ENSCCAG00000037881	SF1	99	99.841	ENSOCUG00000026486	SF1	100	99.841	Oryctolagus_cuniculus
ENSCCAG00000037881	SF1	90	80.307	ENSORLG00000011853	sf1	58	77.805	Oryzias_latipes
ENSCCAG00000037881	SF1	92	79.250	ENSORLG00020011834	sf1	60	76.611	Oryzias_latipes_hni
ENSCCAG00000037881	SF1	89	80.577	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSCCAG00000037881	SF1	91	80.256	ENSOMEG00000005210	sf1	60	77.698	Oryzias_melastigma
ENSCCAG00000037881	SF1	100	99.843	ENSOGAG00000016196	SF1	100	99.843	Otolemur_garnettii
ENSCCAG00000037881	SF1	96	100.000	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSCCAG00000037881	SF1	99	99.272	ENSPPAG00000002799	-	100	99.272	Pan_paniscus
ENSCCAG00000037881	SF1	98	100.000	ENSPPRG00000013566	SF1	98	100.000	Panthera_pardus
ENSCCAG00000037881	SF1	95	99.256	ENSPTIG00000016141	SF1	92	100.000	Panthera_tigris_altaica
ENSCCAG00000037881	SF1	100	100.000	ENSPTRG00000003846	SF1	100	100.000	Pan_troglodytes
ENSCCAG00000037881	SF1	100	100.000	ENSPANG00000020754	SF1	100	100.000	Papio_anubis
ENSCCAG00000037881	SF1	77	79.580	ENSPKIG00000012116	sf1	89	73.775	Paramormyrops_kingsleyae
ENSCCAG00000037881	SF1	71	85.855	ENSPSIG00000003610	SF1	97	74.704	Pelodiscus_sinensis
ENSCCAG00000037881	SF1	100	99.373	ENSPEMG00000010463	Sf1	100	99.373	Peromyscus_maniculatus_bairdii
ENSCCAG00000037881	SF1	80	72.107	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSCCAG00000037881	SF1	100	98.276	ENSPCIG00000018173	SF1	100	98.276	Phascolarctos_cinereus
ENSCCAG00000037881	SF1	91	85.752	ENSPFOG00000013683	sf1	68	82.524	Poecilia_formosa
ENSCCAG00000037881	SF1	88	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSCCAG00000037881	SF1	88	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSCCAG00000037881	SF1	90	82.292	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSCCAG00000037881	SF1	100	99.843	ENSPPYG00000003098	-	100	99.843	Pongo_abelii
ENSCCAG00000037881	SF1	94	99.244	ENSPCAG00000013631	SF1	80	99.257	Procavia_capensis
ENSCCAG00000037881	SF1	100	99.843	ENSPCOG00000027546	SF1	100	99.843	Propithecus_coquereli
ENSCCAG00000037881	SF1	100	96.285	ENSPVAG00000016938	SF1	100	96.285	Pteropus_vampyrus
ENSCCAG00000037881	SF1	89	82.632	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSCCAG00000037881	SF1	89	85.185	ENSPNAG00000013072	sf1	56	81.937	Pygocentrus_nattereri
ENSCCAG00000037881	SF1	96	99.263	ENSRNOG00000021085	Sf1	94	99.362	Rattus_norvegicus
ENSCCAG00000037881	SF1	96	100.000	ENSRBIG00000042818	SF1	100	95.925	Rhinopithecus_bieti
ENSCCAG00000037881	SF1	100	98.086	ENSRROG00000045655	SF1	100	100.000	Rhinopithecus_roxellana
ENSCCAG00000037881	SF1	86	38.575	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSCCAG00000037881	SF1	99	80.815	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSCCAG00000037881	SF1	96	91.951	ENSSHAG00000006841	SF1	77	91.469	Sarcophilus_harrisii
ENSCCAG00000037881	SF1	93	80.451	ENSSFOG00015021978	sf1	85	68.498	Scleropages_formosus
ENSCCAG00000037881	SF1	96	75.708	ENSSMAG00000007549	sf1	63	76.471	Scophthalmus_maximus
ENSCCAG00000037881	SF1	97	76.540	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSCCAG00000037881	SF1	97	76.540	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSCCAG00000037881	SF1	93	94.949	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSCCAG00000037881	SF1	85	92.416	ENSSPUG00000012907	SF1	86	81.382	Sphenodon_punctatus
ENSCCAG00000037881	SF1	90	80.670	ENSSPAG00000019060	sf1	61	76.056	Stegastes_partitus
ENSCCAG00000037881	SF1	100	99.687	ENSSSCG00000013021	SF1	100	99.687	Sus_scrofa
ENSCCAG00000037881	SF1	94	71.921	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSCCAG00000037881	SF1	88	100.000	ENSTBEG00000013133	SF1	83	100.000	Tupaia_belangeri
ENSCCAG00000037881	SF1	93	94.192	ENSTTRG00000008857	SF1	100	95.717	Tursiops_truncatus
ENSCCAG00000037881	SF1	76	96.488	ENSUAMG00000011977	SF1	97	93.849	Ursus_americanus
ENSCCAG00000037881	SF1	96	98.768	ENSUMAG00000007268	SF1	95	98.864	Ursus_maritimus
ENSCCAG00000037881	SF1	71	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSCCAG00000037881	SF1	96	100.000	ENSVVUG00000028585	SF1	98	100.000	Vulpes_vulpes
ENSCCAG00000037881	SF1	98	80.861	ENSXETG00000008434	sf1	66	83.805	Xenopus_tropicalis
ENSCCAG00000037881	SF1	87	84.932	ENSXCOG00000003704	sf1	75	82.368	Xiphophorus_couchianus
ENSCCAG00000037881	SF1	89	83.113	ENSXMAG00000007822	sf1	62	79.376	Xiphophorus_maculatus