EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000037907 (Gene tree)
Gene ID: 108290589
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 14705 bases
Position: chrKV389866.1:53029-67733
Accession: 108290589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000040198	tRNA-synt_1g	PF09334.11	9.8e-15	1	1
ENSCCAP00000040200	tRNA-synt_1g	PF09334.11	1.5e-14	1	1
ENSCCAP00000040202	tRNA-synt_1g	PF09334.11	1.7e-14	1	1
ENSCCAP00000040200	Anticodon_1	PF08264.13	9.7e-31	1	1
ENSCCAP00000040202	Anticodon_1	PF08264.13	1e-30	1	1
ENSCCAP00000040198	Anticodon_1	PF08264.13	2.4e-24	1	1
ENSCCAP00000040198	tRNA-synt_1	PF00133.22	1.8e-183	1	1
ENSCCAP00000040200	tRNA-synt_1	PF00133.22	2.5e-183	1	1
ENSCCAP00000040202	tRNA-synt_1	PF00133.22	2.8e-183	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000058012	VARS2-202	3607	XM_017510440	ENSCCAP00000040200	1063 (aa)	XP_017365929	A0A2K5SIJ8
ENSCCAT00000058010	VARS2-201	7235	XM_017510441	ENSCCAP00000040198	965 (aa)	XP_017365930	A0A2K5SII8
ENSCCAT00000058014	VARS2-203	3282	-	ENSCCAP00000040202	1093 (aa)	-	A0A2K5SII9

Gene Model

Click here to download ENSCCAG00000037907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000037907's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000037907	VARS2	91	52.367	ENSCCAG00000035656	VARS	100	42.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000037907	VARS2	92	51.386	ENSAPOG00000007396	vars2	98	49.907	Acanthochromis_polyacanthus
ENSCCAG00000037907	VARS2	99	86.535	ENSAMEG00000012997	VARS2	97	86.560	Ailuropoda_melanoleuca
ENSCCAG00000037907	VARS2	98	50.471	ENSACIG00000004344	vars2	99	50.377	Amphilophus_citrinellus
ENSCCAG00000037907	VARS2	92	50.940	ENSAOCG00000000476	vars2	98	49.491	Amphiprion_ocellaris
ENSCCAG00000037907	VARS2	92	50.990	ENSAPEG00000008646	vars2	95	49.537	Amphiprion_percula
ENSCCAG00000037907	VARS2	92	52.847	ENSATEG00000012291	vars2	97	51.579	Anabas_testudineus
ENSCCAG00000037907	VARS2	97	58.706	ENSACAG00000022093	VARS2	97	58.516	Anolis_carolinensis
ENSCCAG00000037907	VARS2	100	97.554	ENSANAG00000038018	VARS2	100	97.554	Aotus_nancymaae
ENSCCAG00000037907	VARS2	97	49.673	ENSACLG00000018673	vars2	99	49.673	Astatotilapia_calliptera
ENSCCAG00000037907	VARS2	97	52.264	ENSAMXG00000017773	vars2	96	51.921	Astyanax_mexicanus
ENSCCAG00000037907	VARS2	99	88.235	ENSBTAG00000010698	VARS2	99	88.030	Bos_taurus
ENSCCAG00000037907	VARS2	100	97.178	ENSCJAG00000019826	VARS2	100	97.178	Callithrix_jacchus
ENSCCAG00000037907	VARS2	99	85.311	ENSCAFG00000000454	VARS2	100	85.311	Canis_familiaris
ENSCCAG00000037907	VARS2	95	84.118	ENSCAFG00020019387	VARS2	95	85.899	Canis_lupus_dingo
ENSCCAG00000037907	VARS2	99	88.330	ENSCHIG00000007847	VARS2	99	88.113	Capra_hircus
ENSCCAG00000037907	VARS2	100	89.192	ENSTSYG00000009904	VARS2	100	89.192	Carlito_syrichta
ENSCCAG00000037907	VARS2	88	84.657	ENSCAPG00000017770	VARS2	99	84.657	Cavia_aperea
ENSCCAG00000037907	VARS2	99	84.196	ENSCPOG00000021834	VARS2	99	84.255	Cavia_porcellus
ENSCCAG00000037907	VARS2	100	95.296	ENSCATG00000032554	VARS2	100	95.296	Cercocebus_atys
ENSCCAG00000037907	VARS2	99	84.354	ENSCLAG00000002889	VARS2	99	84.354	Chinchilla_lanigera
ENSCCAG00000037907	VARS2	100	94.732	ENSCSAG00000008327	VARS2	100	94.732	Chlorocebus_sabaeus
ENSCCAG00000037907	VARS2	90	62.539	ENSCPBG00000021502	VARS2	96	62.539	Chrysemys_picta_bellii
ENSCCAG00000037907	VARS2	100	94.826	ENSCANG00000014991	VARS2	100	94.874	Colobus_angolensis_palliatus
ENSCCAG00000037907	VARS2	98	82.854	ENSCGRG00001021535	Vars2	99	82.703	Cricetulus_griseus_chok1gshd
ENSCCAG00000037907	VARS2	98	82.854	ENSCGRG00000014112	Vars2	99	82.703	Cricetulus_griseus_crigri
ENSCCAG00000037907	VARS2	79	69.128	ENSCSEG00000015432	vars2	88	67.333	Cynoglossus_semilaevis
ENSCCAG00000037907	VARS2	61	55.927	ENSCVAG00000017765	vars2	98	51.485	Cyprinodon_variegatus
ENSCCAG00000037907	VARS2	96	51.877	ENSDARG00000056717	vars2	96	51.884	Danio_rerio
ENSCCAG00000037907	VARS2	79	87.262	ENSDORG00000008516	Vars2	93	87.262	Dipodomys_ordii
ENSCCAG00000037907	VARS2	100	75.940	ENSETEG00000014844	VARS2	99	75.940	Echinops_telfairi
ENSCCAG00000037907	VARS2	99	89.130	ENSEASG00005019997	VARS2	97	89.130	Equus_asinus_asinus
ENSCCAG00000037907	VARS2	99	90.368	ENSECAG00000018202	VARS2	99	90.368	Equus_caballus
ENSCCAG00000037907	VARS2	68	86.408	ENSEEUG00000012591	-	68	86.408	Erinaceus_europaeus
ENSCCAG00000037907	VARS2	93	52.182	ENSELUG00000017824	vars2	98	51.115	Esox_lucius
ENSCCAG00000037907	VARS2	99	86.911	ENSFCAG00000010531	VARS2	100	86.911	Felis_catus
ENSCCAG00000037907	VARS2	99	84.972	ENSFDAG00000017216	VARS2	99	84.972	Fukomys_damarensis
ENSCCAG00000037907	VARS2	85	54.212	ENSFHEG00000013932	vars2	91	50.647	Fundulus_heteroclitus
ENSCCAG00000037907	VARS2	87	57.601	ENSGMOG00000018960	vars2	99	55.089	Gadus_morhua
ENSCCAG00000037907	VARS2	84	48.510	ENSGAFG00000004737	vars2	89	48.391	Gambusia_affinis
ENSCCAG00000037907	VARS2	92	52.626	ENSGACG00000001464	vars2	99	52.424	Gasterosteus_aculeatus
ENSCCAG00000037907	VARS2	90	61.515	ENSGAGG00000011652	VARS2	98	61.515	Gopherus_agassizii
ENSCCAG00000037907	VARS2	100	94.356	ENSGGOG00000014587	VARS2	100	94.356	Gorilla_gorilla
ENSCCAG00000037907	VARS2	90	50.806	ENSHBUG00000002448	vars2	95	50.706	Haplochromis_burtoni
ENSCCAG00000037907	VARS2	99	83.695	ENSHGLG00000012886	VARS2	97	83.458	Heterocephalus_glaber_female
ENSCCAG00000037907	VARS2	99	83.600	ENSHGLG00100016535	VARS2	99	83.600	Heterocephalus_glaber_male
ENSCCAG00000037907	VARS2	68	49.059	ENSHCOG00000017907	vars2	94	51.268	Hippocampus_comes
ENSCCAG00000037907	VARS2	91	54.536	ENSIPUG00000015573	Vars2	96	52.783	Ictalurus_punctatus
ENSCCAG00000037907	VARS2	100	88.722	ENSSTOG00000009924	VARS2	100	88.722	Ictidomys_tridecemlineatus
ENSCCAG00000037907	VARS2	99	83.523	ENSJJAG00000011144	Vars2	99	83.523	Jaculus_jaculus
ENSCCAG00000037907	VARS2	93	51.111	ENSKMAG00000001393	vars2	97	50.375	Kryptolebias_marmoratus
ENSCCAG00000037907	VARS2	57	62.523	ENSLBEG00000005480	-	82	62.050	Labrus_bergylta
ENSCCAG00000037907	VARS2	95	50.624	ENSLBEG00000011949	vars2	97	50.237	Labrus_bergylta
ENSCCAG00000037907	VARS2	95	52.372	ENSLACG00000001576	-	99	52.469	Latimeria_chalumnae
ENSCCAG00000037907	VARS2	99	86.256	ENSLAFG00000015183	VARS2	99	86.256	Loxodonta_africana
ENSCCAG00000037907	VARS2	100	94.544	ENSMFAG00000042367	VARS2	100	94.544	Macaca_fascicularis
ENSCCAG00000037907	VARS2	100	94.544	ENSMMUG00000018609	VARS2	100	94.544	Macaca_mulatta
ENSCCAG00000037907	VARS2	100	94.450	ENSMNEG00000043163	VARS2	100	94.450	Macaca_nemestrina
ENSCCAG00000037907	VARS2	100	95.202	ENSMLEG00000041728	VARS2	100	94.876	Mandrillus_leucophaeus
ENSCCAG00000037907	VARS2	96	50.095	ENSMAMG00000020339	vars2	97	49.811	Mastacembelus_armatus
ENSCCAG00000037907	VARS2	97	49.579	ENSMZEG00005017669	vars2	99	49.486	Maylandia_zebra
ENSCCAG00000037907	VARS2	99	82.908	ENSMAUG00000018946	Vars2	99	82.908	Mesocricetus_auratus
ENSCCAG00000037907	VARS2	92	92.152	ENSMICG00000005365	VARS2	100	92.152	Microcebus_murinus
ENSCCAG00000037907	VARS2	93	85.455	ENSMOCG00000014607	Vars2	100	85.455	Microtus_ochrogaster
ENSCCAG00000037907	VARS2	91	51.368	ENSMMOG00000012122	vars2	96	49.613	Mola_mola
ENSCCAG00000037907	VARS2	99	75.306	ENSMODG00000015848	VARS2	99	75.306	Monodelphis_domestica
ENSCCAG00000037907	VARS2	93	51.796	ENSMALG00000009217	vars2	98	51.697	Monopterus_albus
ENSCCAG00000037907	VARS2	99	83.962	MGP_CAROLIEiJ_G0021529	Vars2	99	83.962	Mus_caroli
ENSCCAG00000037907	VARS2	99	83.868	ENSMUSG00000038838	Vars2	99	83.868	Mus_musculus
ENSCCAG00000037907	VARS2	99	84.310	MGP_PahariEiJ_G0020523	Vars2	99	84.310	Mus_pahari
ENSCCAG00000037907	VARS2	99	83.679	MGP_SPRETEiJ_G0022436	Vars2	99	83.679	Mus_spretus
ENSCCAG00000037907	VARS2	99	86.535	ENSMPUG00000011643	VARS2	100	86.535	Mustela_putorius_furo
ENSCCAG00000037907	VARS2	99	83.723	ENSMLUG00000002356	VARS2	97	83.723	Myotis_lucifugus
ENSCCAG00000037907	VARS2	98	77.831	ENSNGAG00000020607	Vars2	99	77.264	Nannospalax_galili
ENSCCAG00000037907	VARS2	61	49.036	ENSNBRG00000001624	vars2	57	50.276	Neolamprologus_brichardi
ENSCCAG00000037907	VARS2	100	90.789	ENSNLEG00000005625	VARS2	100	90.311	Nomascus_leucogenys
ENSCCAG00000037907	VARS2	78	73.833	ENSMEUG00000014475	VARS2	90	73.833	Notamacropus_eugenii
ENSCCAG00000037907	VARS2	90	84.956	ENSOPRG00000000682	VARS2	90	84.956	Ochotona_princeps
ENSCCAG00000037907	VARS2	99	83.113	ENSODEG00000017965	VARS2	99	83.113	Octodon_degus
ENSCCAG00000037907	VARS2	92	37.026	ENSONIG00000004734	vars2	99	37.148	Oreochromis_niloticus
ENSCCAG00000037907	VARS2	75	93.939	ENSOANG00000000398	-	98	93.939	Ornithorhynchus_anatinus
ENSCCAG00000037907	VARS2	99	80.576	ENSOCUG00000021496	VARS2	65	80.627	Oryctolagus_cuniculus
ENSCCAG00000037907	VARS2	92	52.626	ENSORLG00000010632	vars2	94	51.527	Oryzias_latipes
ENSCCAG00000037907	VARS2	92	52.174	ENSORLG00020018584	vars2	96	51.100	Oryzias_latipes_hni
ENSCCAG00000037907	VARS2	92	52.075	ENSORLG00015010408	vars2	96	50.760	Oryzias_latipes_hsok
ENSCCAG00000037907	VARS2	92	52.725	ENSOMEG00000008360	vars2	98	50.838	Oryzias_melastigma
ENSCCAG00000037907	VARS2	100	89.400	ENSOGAG00000006087	VARS2	99	89.074	Otolemur_garnettii
ENSCCAG00000037907	VARS2	99	87.014	ENSOARG00000010844	VARS2	99	86.326	Ovis_aries
ENSCCAG00000037907	VARS2	100	94.450	ENSPPAG00000041141	VARS2	100	94.450	Pan_paniscus
ENSCCAG00000037907	VARS2	99	86.805	ENSPPRG00000006751	VARS2	98	86.704	Panthera_pardus
ENSCCAG00000037907	VARS2	99	86.711	ENSPTIG00000017799	VARS2	98	88.052	Panthera_tigris_altaica
ENSCCAG00000037907	VARS2	100	94.450	ENSPTRG00000034497	VARS2	100	94.450	Pan_troglodytes
ENSCCAG00000037907	VARS2	100	94.826	ENSPANG00000018481	VARS2	100	94.961	Papio_anubis
ENSCCAG00000037907	VARS2	95	54.012	ENSPKIG00000011372	vars2	99	53.008	Paramormyrops_kingsleyae
ENSCCAG00000037907	VARS2	65	66.244	ENSPSIG00000006206	VARS2	92	65.741	Pelodiscus_sinensis
ENSCCAG00000037907	VARS2	98	51.541	ENSPMGG00000000465	vars2	99	50.655	Periophthalmus_magnuspinnatus
ENSCCAG00000037907	VARS2	99	84.295	ENSPEMG00000014691	Vars2	99	84.295	Peromyscus_maniculatus_bairdii
ENSCCAG00000037907	VARS2	99	77.010	ENSPCIG00000015040	VARS2	99	77.010	Phascolarctos_cinereus
ENSCCAG00000037907	VARS2	92	51.984	ENSPFOG00000017616	vars2	95	50.969	Poecilia_formosa
ENSCCAG00000037907	VARS2	92	51.632	ENSPLAG00000019778	vars2	96	50.628	Poecilia_latipinna
ENSCCAG00000037907	VARS2	92	51.731	ENSPMEG00000011123	vars2	96	50.725	Poecilia_mexicana
ENSCCAG00000037907	VARS2	89	47.466	ENSPREG00000014998	vars2	94	46.054	Poecilia_reticulata
ENSCCAG00000037907	VARS2	100	94.638	ENSPPYG00000016424	VARS2	100	94.638	Pongo_abelii
ENSCCAG00000037907	VARS2	84	80.838	ENSPCAG00000006946	VARS2	84	80.838	Procavia_capensis
ENSCCAG00000037907	VARS2	99	89.652	ENSPCOG00000014839	VARS2	98	89.562	Propithecus_coquereli
ENSCCAG00000037907	VARS2	100	87.218	ENSPVAG00000004197	VARS2	99	87.218	Pteropus_vampyrus
ENSCCAG00000037907	VARS2	83	58.602	ENSPNYG00000010314	vars2	97	58.602	Pundamilia_nyererei
ENSCCAG00000037907	VARS2	95	53.128	ENSPNAG00000026793	vars2	96	52.852	Pygocentrus_nattereri
ENSCCAG00000037907	VARS2	99	83.728	ENSRNOG00000000833	Vars2	99	83.728	Rattus_norvegicus
ENSCCAG00000037907	VARS2	100	94.356	ENSRBIG00000032725	VARS2	100	94.356	Rhinopithecus_bieti
ENSCCAG00000037907	VARS2	100	94.450	ENSRROG00000043847	VARS2	100	94.450	Rhinopithecus_roxellana
ENSCCAG00000037907	VARS2	100	95.576	ENSSBOG00000033240	VARS2	100	95.067	Saimiri_boliviensis_boliviensis
ENSCCAG00000037907	VARS2	99	75.213	ENSSHAG00000009307	VARS2	100	75.213	Sarcophilus_harrisii
ENSCCAG00000037907	VARS2	96	52.232	ENSSFOG00015016187	vars2	98	51.354	Scleropages_formosus
ENSCCAG00000037907	VARS2	93	52.616	ENSSMAG00000020842	vars2	97	52.011	Scophthalmus_maximus
ENSCCAG00000037907	VARS2	93	51.471	ENSSDUG00000011598	vars2	99	50.047	Seriola_dumerili
ENSCCAG00000037907	VARS2	90	52.111	ENSSLDG00000015492	vars2	97	50.143	Seriola_lalandi_dorsalis
ENSCCAG00000037907	VARS2	57	92.701	ENSSARG00000003786	-	70	92.701	Sorex_araneus
ENSCCAG00000037907	VARS2	88	59.295	ENSSPUG00000014700	VARS2	94	59.188	Sphenodon_punctatus
ENSCCAG00000037907	VARS2	93	49.751	ENSSPAG00000004654	vars2	98	48.299	Stegastes_partitus
ENSCCAG00000037907	VARS2	99	87.571	ENSSSCG00000001384	VARS2	100	87.571	Sus_scrofa
ENSCCAG00000037907	VARS2	93	52.912	ENSTRUG00000005264	vars2	99	51.576	Takifugu_rubripes
ENSCCAG00000037907	VARS2	99	50.561	ENSTNIG00000005916	vars2	99	50.931	Tetraodon_nigroviridis
ENSCCAG00000037907	VARS2	52	92.537	ENSTBEG00000007976	-	53	92.537	Tupaia_belangeri
ENSCCAG00000037907	VARS2	100	75.940	ENSTTRG00000012243	VARS2	100	75.940	Tursiops_truncatus
ENSCCAG00000037907	VARS2	99	86.265	ENSUAMG00000026124	VARS2	100	87.419	Ursus_americanus
ENSCCAG00000037907	VARS2	99	87.288	ENSUMAG00000019894	VARS2	100	87.288	Ursus_maritimus
ENSCCAG00000037907	VARS2	99	85.593	ENSVVUG00000010754	VARS2	95	85.593	Vulpes_vulpes
ENSCCAG00000037907	VARS2	89	54.621	ENSXETG00000003036	vars2	99	54.621	Xenopus_tropicalis
ENSCCAG00000037907	VARS2	85	57.753	ENSXCOG00000003455	vars2	95	51.811	Xiphophorus_couchianus
ENSCCAG00000037907	VARS2	92	51.437	ENSXMAG00000013523	vars2	96	50.144	Xiphophorus_maculatus