EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000037920 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: vigilin pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 3382 bases
Position: chrKV389547.1:5657642-5661023
Accession: 108312137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	1	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	2	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	3	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	4	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	5	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	6	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	7	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	8	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	9	10
ENSCCAP00000040228	KH_1	PF00013.29	1.4e-123	10	10

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000058040	-	2892	-	ENSCCAP00000040228	963 (aa)	-	A0A2K5SIL5

Gene Model

Click here to download ENSCCAG00000037920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000037920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000037920	-	100	72.060	ENSCCAG00000023361	-	92	72.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000037920	-	95	80.782	ENSG00000115677	HDLBP	99	80.782	Homo_sapiens
ENSCCAG00000037920	-	100	56.275	ENSAPOG00000012609	hdlbpa	91	56.500	Acanthochromis_polyacanthus
ENSCCAG00000037920	-	100	70.553	ENSAMEG00000016552	HDLBP	92	70.553	Ailuropoda_melanoleuca
ENSCCAG00000037920	-	98	47.117	ENSACIG00000006015	hdlbpa	91	47.117	Amphilophus_citrinellus
ENSCCAG00000037920	-	100	56.275	ENSAOCG00000000300	hdlbpa	91	56.500	Amphiprion_ocellaris
ENSCCAG00000037920	-	100	56.175	ENSAPEG00000000522	hdlbpa	97	56.175	Amphiprion_percula
ENSCCAG00000037920	-	100	56.400	ENSATEG00000009748	hdlbpa	91	56.400	Anabas_testudineus
ENSCCAG00000037920	-	100	63.179	ENSACAG00000001556	HDLBP	93	62.926	Anolis_carolinensis
ENSCCAG00000037920	-	100	71.759	ENSANAG00000020545	HDLBP	92	71.759	Aotus_nancymaae
ENSCCAG00000037920	-	100	63.780	ENSACLG00000025965	hdlbpa	91	61.756	Astatotilapia_calliptera
ENSCCAG00000037920	-	100	57.086	ENSAMXG00000004221	hdlbpa	99	57.086	Astyanax_mexicanus
ENSCCAG00000037920	-	100	86.053	ENSBTAG00000004315	HDLBP	82	86.053	Bos_taurus
ENSCCAG00000037920	-	100	71.471	ENSCJAG00000006152	HDLBP	92	71.471	Callithrix_jacchus
ENSCCAG00000037920	-	100	70.411	ENSCAFG00000012913	HDLBP	99	70.341	Canis_familiaris
ENSCCAG00000037920	-	100	70.411	ENSCAFG00020025089	HDLBP	92	70.411	Canis_lupus_dingo
ENSCCAG00000037920	-	100	69.618	ENSCHIG00000022364	HDLBP	92	69.548	Capra_hircus
ENSCCAG00000037920	-	100	70.541	ENSTSYG00000002379	HDLBP	92	70.541	Carlito_syrichta
ENSCCAG00000037920	-	100	69.820	ENSCAPG00000008584	HDLBP	94	69.187	Cavia_aperea
ENSCCAG00000037920	-	100	70.121	ENSCPOG00000006297	HDLBP	92	70.121	Cavia_porcellus
ENSCCAG00000037920	-	100	71.558	ENSCATG00000039363	HDLBP	92	71.558	Cercocebus_atys
ENSCCAG00000037920	-	100	70.121	ENSCLAG00000002365	HDLBP	92	69.840	Chinchilla_lanigera
ENSCCAG00000037920	-	100	71.759	ENSCSAG00000005781	HDLBP	90	71.759	Chlorocebus_sabaeus
ENSCCAG00000037920	-	92	41.712	ENSCHOG00000003882	-	92	41.712	Choloepus_hoffmanni
ENSCCAG00000037920	-	98	62.274	ENSCPBG00000002442	HDLBP	92	62.274	Chrysemys_picta_bellii
ENSCCAG00000037920	-	100	71.658	ENSCANG00000033571	HDLBP	92	71.515	Colobus_angolensis_palliatus
ENSCCAG00000037920	-	84	44.304	ENSCGRG00001010570	4921511C20Rik	100	44.304	Cricetulus_griseus_chok1gshd
ENSCCAG00000037920	-	100	70.040	ENSCGRG00001006086	Hdlbp	92	70.040	Cricetulus_griseus_chok1gshd
ENSCCAG00000037920	-	99	44.000	ENSCGRG00000015720	Gm382	75	43.219	Cricetulus_griseus_crigri
ENSCCAG00000037920	-	100	70.040	ENSCGRG00000014444	Hdlbp	92	70.040	Cricetulus_griseus_crigri
ENSCCAG00000037920	-	100	63.452	ENSCSEG00000008853	hdlbpa	92	63.452	Cynoglossus_semilaevis
ENSCCAG00000037920	-	100	55.879	ENSCVAG00000017892	hdlbpa	92	55.879	Cyprinodon_variegatus
ENSCCAG00000037920	-	100	55.894	ENSDARG00000009830	hdlbpa	91	55.894	Danio_rerio
ENSCCAG00000037920	-	100	67.333	ENSDNOG00000006753	HDLBP	92	67.333	Dasypus_novemcinctus
ENSCCAG00000037920	-	100	90.909	ENSETEG00000005416	-	69	90.909	Echinops_telfairi
ENSCCAG00000037920	-	100	70.653	ENSEASG00005008249	HDLBP	92	70.653	Equus_asinus_asinus
ENSCCAG00000037920	-	99	48.851	ENSECAG00000028723	-	88	43.720	Equus_caballus
ENSCCAG00000037920	-	99	50.883	ENSECAG00000030885	-	88	50.883	Equus_caballus
ENSCCAG00000037920	-	100	70.653	ENSECAG00000012829	HDLBP	92	70.653	Equus_caballus
ENSCCAG00000037920	-	98	69.988	ENSEEUG00000014648	HDLBP	99	69.988	Erinaceus_europaeus
ENSCCAG00000037920	-	100	54.908	ENSELUG00000010700	hdlbpa	92	54.908	Esox_lucius
ENSCCAG00000037920	-	100	73.971	ENSFCAG00000010455	HDLBP	92	73.971	Felis_catus
ENSCCAG00000037920	-	100	65.631	ENSFALG00000003437	HDLBP	92	65.020	Ficedula_albicollis
ENSCCAG00000037920	-	100	69.950	ENSFDAG00000000456	HDLBP	92	69.950	Fukomys_damarensis
ENSCCAG00000037920	-	100	55.234	ENSFHEG00000004848	hdlbpa	92	55.455	Fundulus_heteroclitus
ENSCCAG00000037920	-	100	55.589	ENSGMOG00000009932	hdlbpa	92	55.589	Gadus_morhua
ENSCCAG00000037920	-	100	65.895	ENSGALG00000005823	HDLBP	92	64.857	Gallus_gallus
ENSCCAG00000037920	-	100	51.398	ENSGAFG00000016766	hdlbpa	91	51.398	Gambusia_affinis
ENSCCAG00000037920	-	100	55.165	ENSGACG00000004648	hdlbpa	91	55.165	Gasterosteus_aculeatus
ENSCCAG00000037920	-	98	71.964	ENSGAGG00000004256	HDLBP	90	69.709	Gopherus_agassizii
ENSCCAG00000037920	-	100	71.558	ENSGGOG00000004392	HDLBP	92	71.558	Gorilla_gorilla
ENSCCAG00000037920	-	100	56.355	ENSHBUG00000001136	hdlbpa	91	56.355	Haplochromis_burtoni
ENSCCAG00000037920	-	100	69.416	ENSHGLG00000004910	HDLBP	92	69.208	Heterocephalus_glaber_female
ENSCCAG00000037920	-	100	69.416	ENSHGLG00100013326	HDLBP	92	69.208	Heterocephalus_glaber_male
ENSCCAG00000037920	-	100	56.456	ENSHCOG00000014837	hdlbpa	91	56.456	Hippocampus_comes
ENSCCAG00000037920	-	100	58.200	ENSIPUG00000013088	hdlbp	91	58.200	Ictalurus_punctatus
ENSCCAG00000037920	-	73	67.537	ENSIPUG00000013177	-	93	67.537	Ictalurus_punctatus
ENSCCAG00000037920	-	100	69.316	ENSSTOG00000013331	HDLBP	92	69.718	Ictidomys_tridecemlineatus
ENSCCAG00000037920	-	98	38.386	ENSJJAG00000013712	-	89	38.142	Jaculus_jaculus
ENSCCAG00000037920	-	100	70.724	ENSJJAG00000003596	Hdlbp	92	70.724	Jaculus_jaculus
ENSCCAG00000037920	-	100	55.666	ENSKMAG00000007571	hdlbpa	93	55.611	Kryptolebias_marmoratus
ENSCCAG00000037920	-	100	55.865	ENSLBEG00000027461	hdlbpa	91	55.676	Labrus_bergylta
ENSCCAG00000037920	-	100	60.220	ENSLACG00000003592	HDLBP	91	59.684	Latimeria_chalumnae
ENSCCAG00000037920	-	100	58.610	ENSLOCG00000006278	hdlbpa	92	58.610	Lepisosteus_oculatus
ENSCCAG00000037920	-	100	70.020	ENSLAFG00000014826	HDLBP	92	69.739	Loxodonta_africana
ENSCCAG00000037920	-	100	74.468	ENSMFAG00000033641	HDLBP	92	71.558	Macaca_fascicularis
ENSCCAG00000037920	-	100	71.457	ENSMMUG00000004730	HDLBP	92	70.913	Macaca_mulatta
ENSCCAG00000037920	-	100	71.558	ENSMNEG00000024260	HDLBP	92	71.558	Macaca_nemestrina
ENSCCAG00000037920	-	100	71.558	ENSMLEG00000042734	HDLBP	92	71.558	Mandrillus_leucophaeus
ENSCCAG00000037920	-	100	56.526	ENSMAMG00000008611	hdlbpa	91	56.526	Mastacembelus_armatus
ENSCCAG00000037920	-	100	56.355	ENSMZEG00005009513	hdlbpa	91	56.355	Maylandia_zebra
ENSCCAG00000037920	-	99	65.531	ENSMGAG00000003686	HDLBP	99	64.758	Meleagris_gallopavo
ENSCCAG00000037920	-	100	70.341	ENSMAUG00000017743	Hdlbp	92	70.341	Mesocricetus_auratus
ENSCCAG00000037920	-	100	70.251	ENSMICG00000004569	HDLBP	92	70.251	Microcebus_murinus
ENSCCAG00000037920	-	100	70.341	ENSMOCG00000006679	Hdlbp	92	70.341	Microtus_ochrogaster
ENSCCAG00000037920	-	97	60.931	ENSMMOG00000006880	hdlbpa	91	59.077	Mola_mola
ENSCCAG00000037920	-	100	65.243	ENSMODG00000016033	HDLBP	92	65.243	Monodelphis_domestica
ENSCCAG00000037920	-	100	55.964	ENSMALG00000015095	hdlbpa	92	56.188	Monopterus_albus
ENSCCAG00000037920	-	100	70.341	MGP_CAROLIEiJ_G0014456	Hdlbp	92	70.341	Mus_caroli
ENSCCAG00000037920	-	87	43.933	MGP_CAROLIEiJ_G0033374	4921511C20Rik	100	43.933	Mus_caroli
ENSCCAG00000037920	-	99	42.100	MGP_CAROLIEiJ_G0033373	Gm382	75	43.426	Mus_caroli
ENSCCAG00000037920	-	87	43.789	ENSMUSG00000049815	4921511C20Rik	100	43.789	Mus_musculus
ENSCCAG00000037920	-	99	41.799	ENSMUSG00000062791	Gm382	75	43.081	Mus_musculus
ENSCCAG00000037920	-	100	70.341	ENSMUSG00000034088	Hdlbp	92	70.341	Mus_musculus
ENSCCAG00000037920	-	87	43.249	MGP_PahariEiJ_G0031914	4921511C20Rik	100	43.249	Mus_pahari
ENSCCAG00000037920	-	99	43.394	MGP_PahariEiJ_G0031913	Gm382	74	44.525	Mus_pahari
ENSCCAG00000037920	-	100	70.240	MGP_PahariEiJ_G0027692	Hdlbp	92	70.240	Mus_pahari
ENSCCAG00000037920	-	99	41.587	MGP_SPRETEiJ_G0034538	Gm382	75	42.840	Mus_spretus
ENSCCAG00000037920	-	87	43.249	MGP_SPRETEiJ_G0034539	4921511C20Rik	100	43.249	Mus_spretus
ENSCCAG00000037920	-	100	70.341	MGP_SPRETEiJ_G0015260	Hdlbp	92	70.341	Mus_spretus
ENSCCAG00000037920	-	100	69.910	ENSMPUG00000000163	HDLBP	92	69.910	Mustela_putorius_furo
ENSCCAG00000037920	-	100	70.322	ENSMLUG00000005628	HDLBP	92	70.322	Myotis_lucifugus
ENSCCAG00000037920	-	100	70.512	ENSNGAG00000014873	Hdlbp	92	70.441	Nannospalax_galili
ENSCCAG00000037920	-	100	56.690	ENSNBRG00000000051	hdlbpa	93	56.004	Neolamprologus_brichardi
ENSCCAG00000037920	-	100	75.120	ENSNLEG00000013818	HDLBP	92	75.120	Nomascus_leucogenys
ENSCCAG00000037920	-	93	52.396	ENSNLEG00000031018	-	86	52.396	Nomascus_leucogenys
ENSCCAG00000037920	-	99	92.857	ENSMEUG00000008427	HDLBP	71	92.857	Notamacropus_eugenii
ENSCCAG00000037920	-	100	67.917	ENSOPRG00000011965	-	92	67.917	Ochotona_princeps
ENSCCAG00000037920	-	100	66.061	ENSODEG00000017391	-	92	66.061	Octodon_degus
ENSCCAG00000037920	-	100	69.618	ENSODEG00000012313	-	92	69.618	Octodon_degus
ENSCCAG00000037920	-	100	56.158	ENSONIG00000019272	hdlbpa	91	56.158	Oreochromis_niloticus
ENSCCAG00000037920	-	51	76.744	ENSOANG00000021864	-	96	76.744	Ornithorhynchus_anatinus
ENSCCAG00000037920	-	100	66.398	ENSOANG00000011759	-	92	66.132	Ornithorhynchus_anatinus
ENSCCAG00000037920	-	100	68.904	ENSOCUG00000012667	HDLBP	92	68.904	Oryctolagus_cuniculus
ENSCCAG00000037920	-	100	56.052	ENSORLG00000002226	hdlbpa	92	56.052	Oryzias_latipes
ENSCCAG00000037920	-	100	56.250	ENSORLG00020007905	hdlbpa	92	56.250	Oryzias_latipes_hni
ENSCCAG00000037920	-	100	62.826	ENSORLG00015004126	hdlbpa	91	62.826	Oryzias_latipes_hsok
ENSCCAG00000037920	-	100	54.317	ENSOMEG00000000247	hdlbpa	91	54.536	Oryzias_melastigma
ENSCCAG00000037920	-	100	70.423	ENSOGAG00000000738	HDLBP	92	70.211	Otolemur_garnettii
ENSCCAG00000037920	-	100	67.732	ENSOARG00000017870	HDLBP	92	67.732	Ovis_aries
ENSCCAG00000037920	-	100	71.457	ENSPPAG00000023318	HDLBP	92	71.457	Pan_paniscus
ENSCCAG00000037920	-	100	70.311	ENSPPRG00000010215	HDLBP	92	70.240	Panthera_pardus
ENSCCAG00000037920	-	100	81.873	ENSPTIG00000009328	HDLBP	90	81.873	Panthera_tigris_altaica
ENSCCAG00000037920	-	100	71.658	ENSPTRG00000013121	HDLBP	92	71.658	Pan_troglodytes
ENSCCAG00000037920	-	100	71.457	ENSPANG00000011832	HDLBP	92	71.314	Papio_anubis
ENSCCAG00000037920	-	100	55.964	ENSPKIG00000002392	hdlbpa	92	55.964	Paramormyrops_kingsleyae
ENSCCAG00000037920	-	95	62.077	ENSPSIG00000010068	HDLBP	91	62.077	Pelodiscus_sinensis
ENSCCAG00000037920	-	100	56.300	ENSPMGG00000002102	hdlbpa	92	56.300	Periophthalmus_magnuspinnatus
ENSCCAG00000037920	-	100	70.541	ENSPEMG00000017704	Hdlbp	92	70.541	Peromyscus_maniculatus_bairdii
ENSCCAG00000037920	-	99	65.960	ENSPCIG00000015375	HDLBP	86	65.827	Phascolarctos_cinereus
ENSCCAG00000037920	-	100	55.179	ENSPFOG00000000236	hdlbpa	92	55.124	Poecilia_formosa
ENSCCAG00000037920	-	95	54.856	ENSPLAG00000006033	hdlbpa	91	54.797	Poecilia_latipinna
ENSCCAG00000037920	-	100	55.124	ENSPMEG00000006627	hdlbpa	92	55.070	Poecilia_mexicana
ENSCCAG00000037920	-	100	46.218	ENSPREG00000014450	hdlbpa	92	49.950	Poecilia_reticulata
ENSCCAG00000037920	-	100	71.357	ENSPPYG00000013351	HDLBP	92	71.357	Pongo_abelii
ENSCCAG00000037920	-	100	88.304	ENSPCAG00000011136	HDLBP	71	88.304	Procavia_capensis
ENSCCAG00000037920	-	100	68.799	ENSPCOG00000021622	HDLBP	91	68.799	Propithecus_coquereli
ENSCCAG00000037920	-	100	68.813	ENSPVAG00000000555	HDLBP	92	68.813	Pteropus_vampyrus
ENSCCAG00000037920	-	100	56.355	ENSPNYG00000020753	hdlbpa	91	56.355	Pundamilia_nyererei
ENSCCAG00000037920	-	99	57.864	ENSPNAG00000029610	hdlbpa	90	57.864	Pygocentrus_nattereri
ENSCCAG00000037920	-	87	41.337	ENSRNOG00000042823	RGD1561230	97	41.337	Rattus_norvegicus
ENSCCAG00000037920	-	100	70.441	ENSRNOG00000031479	Hdlbp	92	70.441	Rattus_norvegicus
ENSCCAG00000037920	-	99	43.023	ENSRNOG00000031294	RGD1563104	75	43.630	Rattus_norvegicus
ENSCCAG00000037920	-	99	41.136	ENSRNOG00000028847	AABR07040251.1	100	41.136	Rattus_norvegicus
ENSCCAG00000037920	-	100	71.658	ENSRBIG00000041381	HDLBP	92	71.515	Rhinopithecus_bieti
ENSCCAG00000037920	-	100	71.658	ENSRROG00000034263	HDLBP	92	71.515	Rhinopithecus_roxellana
ENSCCAG00000037920	-	100	74.641	ENSSBOG00000033067	-	95	74.641	Saimiri_boliviensis_boliviensis
ENSCCAG00000037920	-	100	71.357	ENSSBOG00000029714	-	89	71.357	Saimiri_boliviensis_boliviensis
ENSCCAG00000037920	-	100	67.139	ENSSHAG00000012422	HDLBP	92	67.071	Sarcophilus_harrisii
ENSCCAG00000037920	-	100	57.685	ENSSFOG00015018627	hdlbp	92	57.685	Scleropages_formosus
ENSCCAG00000037920	-	100	56.517	ENSSMAG00000002382	hdlbpa	91	56.461	Scophthalmus_maximus
ENSCCAG00000037920	-	100	56.287	ENSSDUG00000022258	hdlbpa	91	56.287	Seriola_dumerili
ENSCCAG00000037920	-	100	56.188	ENSSLDG00000004437	hdlbpa	91	56.188	Seriola_lalandi_dorsalis
ENSCCAG00000037920	-	100	74.084	ENSSARG00000012639	HDLBP	89	74.084	Sorex_araneus
ENSCCAG00000037920	-	100	64.729	ENSSPUG00000009182	HDLBP	92	64.130	Sphenodon_punctatus
ENSCCAG00000037920	-	100	55.876	ENSSPAG00000009145	hdlbpa	91	56.100	Stegastes_partitus
ENSCCAG00000037920	-	100	68.707	ENSSSCG00000016379	HDLBP	99	68.707	Sus_scrofa
ENSCCAG00000037920	-	95	60.125	ENSTGUG00000006189	HDLBP	90	59.459	Taeniopygia_guttata
ENSCCAG00000037920	-	100	56.212	ENSTRUG00000012148	hdlbpa	91	56.212	Takifugu_rubripes
ENSCCAG00000037920	-	99	55.918	ENSTNIG00000004185	hdlbpa	91	55.918	Tetraodon_nigroviridis
ENSCCAG00000037920	-	94	53.444	ENSTBEG00000001860	HDLBP	83	53.444	Tupaia_belangeri
ENSCCAG00000037920	-	100	91.184	ENSTTRG00000015251	HDLBP	70	91.184	Tursiops_truncatus
ENSCCAG00000037920	-	100	70.754	ENSUAMG00000018383	HDLBP	92	70.754	Ursus_americanus
ENSCCAG00000037920	-	100	70.512	ENSUMAG00000010539	HDLBP	92	70.512	Ursus_maritimus
ENSCCAG00000037920	-	93	44.809	ENSVPAG00000003112	HDLBP	77	44.809	Vicugna_pacos
ENSCCAG00000037920	-	95	68.683	ENSVVUG00000022797	HDLBP	91	67.416	Vulpes_vulpes
ENSCCAG00000037920	-	100	59.481	ENSXETG00000012164	hdlbp	90	59.481	Xenopus_tropicalis
ENSCCAG00000037920	-	100	55.080	ENSXCOG00000005943	hdlbpa	92	55.025	Xiphophorus_couchianus
ENSCCAG00000037920	-	100	55.224	ENSXMAG00000003787	hdlbpa	91	55.169	Xiphophorus_maculatus