EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000000078 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: spliceosome RNA helicase DDX39B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 2068 bases
Position: chrJH006658.1:552-2619
Accession: 100762504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000000055	ResIII	PF04851.15	9.4e-07	1	1
ENSCGRP00000000055	DEAD	PF00270.29	2.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000000081	-	1057	XM_003515820	ENSCGRP00000000055	229 (aa)	XP_003515868	G3INP0

Gene Model

Click here to download ENSCGRG00000000078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000000078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000000078	-	70	36.250	ENSCGRG00000001983	-	60	31.875
ENSCGRG00000000078	-	90	99.512	ENSCGRG00000012479	-	64	99.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000000078	-	90	98.537	ENSG00000198563	DDX39B	100	97.600	Homo_sapiens
ENSCGRG00000000078	-	90	98.049	ENSAMEG00000009508	DDX39B	50	91.364	Ailuropoda_melanoleuca
ENSCGRG00000000078	-	90	86.829	ENSTSYG00000029741	-	89	86.829	Carlito_syrichta
ENSCGRG00000000078	-	90	98.537	ENSCANG00000041217	DDX39B	64	98.537	Colobus_angolensis_palliatus
ENSCGRG00000000078	-	90	99.512	ENSCGRG00001017315	-	95	99.512	Cricetulus_griseus_chok1gshd
ENSCGRG00000000078	-	90	98.049	ENSDORG00000004985	Ddx39b	55	98.049	Dipodomys_ordii
ENSCGRG00000000078	-	90	98.537	ENSGGOG00000005989	DDX39B	64	98.537	Gorilla_gorilla
ENSCGRG00000000078	-	90	88.095	ENSHBUG00000022054	-	78	88.095	Haplochromis_burtoni
ENSCGRG00000000078	-	90	84.507	ENSIPUG00000015733	DDX39B	51	84.977	Ictalurus_punctatus
ENSCGRG00000000078	-	90	74.146	ENSLBEG00000017177	-	70	74.146	Labrus_bergylta
ENSCGRG00000000078	-	90	98.537	ENSLAFG00000014202	DDX39B	78	98.537	Loxodonta_africana
ENSCGRG00000000078	-	90	98.537	ENSMFAG00000034233	DDX39B	64	98.537	Macaca_fascicularis
ENSCGRG00000000078	-	90	98.537	ENSMMUG00000008839	DDX39B	64	98.537	Macaca_mulatta
ENSCGRG00000000078	-	90	98.537	ENSMNEG00000041059	DDX39B	64	98.537	Macaca_nemestrina
ENSCGRG00000000078	-	90	98.537	ENSMLEG00000043791	DDX39B	64	98.537	Mandrillus_leucophaeus
ENSCGRG00000000078	-	78	97.207	MGP_CAROLIEiJ_G0021519	-	97	97.207	Mus_caroli
ENSCGRG00000000078	-	90	98.537	ENSMUSG00000019432	Ddx39b	83	98.374	Mus_musculus
ENSCGRG00000000078	-	90	98.537	MGP_PahariEiJ_G0020513	Ddx39b	83	98.374	Mus_pahari
ENSCGRG00000000078	-	90	98.537	MGP_SPRETEiJ_G0022424	Ddx39b	63	98.537	Mus_spretus
ENSCGRG00000000078	-	90	98.537	ENSOANG00000008361	DDX39B	82	98.537	Ornithorhynchus_anatinus
ENSCGRG00000000078	-	90	90.909	ENSOCUG00000024126	DDX39B	50	90.909	Oryctolagus_cuniculus
ENSCGRG00000000078	-	90	98.537	ENSPANG00000018609	DDX39B	64	98.537	Papio_anubis
ENSCGRG00000000078	-	90	98.537	ENSPCOG00000018656	DDX39B	51	98.537	Propithecus_coquereli
ENSCGRG00000000078	-	90	98.537	ENSRNOG00000000841	Ddx39b	51	98.537	Rattus_norvegicus
ENSCGRG00000000078	-	90	98.537	ENSRBIG00000031309	DDX39B	64	98.537	Rhinopithecus_bieti
ENSCGRG00000000078	-	90	98.537	ENSRROG00000039517	DDX39B	64	98.537	Rhinopithecus_roxellana
ENSCGRG00000000078	-	64	95.890	ENSSBOG00000030486	-	97	95.890	Saimiri_boliviensis_boliviensis
ENSCGRG00000000078	-	90	98.537	ENSSBOG00000035513	-	64	98.537	Saimiri_boliviensis_boliviensis
ENSCGRG00000000078	-	90	98.537	ENSSARG00000005245	DDX39B	55	98.537	Sorex_araneus
ENSCGRG00000000078	-	87	87.000	ENSUAMG00000027335	DDX39B	51	87.000	Ursus_americanus
ENSCGRG00000000078	-	90	87.317	ENSUMAG00000015124	DDX39B	94	86.829	Ursus_maritimus