EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000000197 (Gene tree)
Gene ID: -
Gene Symbol: Lsm11
Alias: 2210404M20Rik
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 22056 bases
Position: chrJH000335.1:234149-256204
Accession: 100763675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000000191	LSM	PF01423.22	5.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000000218	-	5838	XM_007621365	ENSCGRP00000000191	222 (aa)	XP_007619555	-

Gene Model

Click here to download ENSCGRG00000000197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000000197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000000197	Lsm11	95	98.095	ENSCAPG00000009739	LSM11	100	98.095	Cavia_aperea
ENSCGRG00000000197	Lsm11	96	96.714	ENSCPOG00000000906	LSM11	100	96.714	Cavia_porcellus
ENSCGRG00000000197	Lsm11	97	97.674	ENSCLAG00000017067	LSM11	92	97.674	Chinchilla_lanigera
ENSCGRG00000000197	Lsm11	95	94.762	ENSCHOG00000010946	LSM11	100	94.762	Choloepus_hoffmanni
ENSCGRG00000000197	Lsm11	95	98.095	ENSCANG00000040781	LSM11	100	98.095	Colobus_angolensis_palliatus
ENSCGRG00000000197	Lsm11	98	38.565	ENSCSEG00000019951	lsm11	56	38.565	Cynoglossus_semilaevis
ENSCGRG00000000197	Lsm11	95	97.143	ENSEEUG00000010814	LSM11	100	97.143	Erinaceus_europaeus
ENSCGRG00000000197	Lsm11	95	98.571	ENSMLEG00000027420	LSM11	100	98.571	Mandrillus_leucophaeus
ENSCGRG00000000197	Lsm11	95	40.284	ENSMMOG00000009365	lsm11	51	39.810	Mola_mola
ENSCGRG00000000197	Lsm11	97	73.953	ENSMLUG00000015930	LSM11	98	73.953	Myotis_lucifugus
ENSCGRG00000000197	Lsm11	95	97.156	ENSOGAG00000009059	LSM11	100	97.156	Otolemur_garnettii
ENSCGRG00000000197	Lsm11	95	61.927	ENSPSIG00000005234	LSM11	100	61.927	Pelodiscus_sinensis
ENSCGRG00000000197	Lsm11	94	40.670	ENSPMGG00000020709	lsm11	50	40.670	Periophthalmus_magnuspinnatus
ENSCGRG00000000197	Lsm11	95	40.000	ENSPFOG00000000512	lsm11	50	40.000	Poecilia_formosa
ENSCGRG00000000197	Lsm11	95	40.000	ENSPLAG00000019434	lsm11	51	40.000	Poecilia_latipinna
ENSCGRG00000000197	Lsm11	96	92.488	ENSPCAG00000016360	LSM11	100	92.488	Procavia_capensis
ENSCGRG00000000197	Lsm11	95	98.095	ENSTBEG00000000992	LSM11	100	98.095	Tupaia_belangeri
ENSCGRG00000000197	Lsm11	95	40.952	ENSXMAG00000008238	lsm11	52	40.952	Xiphophorus_maculatus