EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000000257 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(A) polymerase alpha-like
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 2232 bases
Position: chrJH003695.1:60883-63114
Accession: 100759677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000000266	PAP_RNA-bind	PF04926.15	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000000294	-	2010	XM_016963798	ENSCGRP00000000266	669 (aa)	XP_016819287	-

Gene Model

Click here to download ENSCGRG00000000257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000000257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000000257	-	97	74.965	ENSCGRG00000001888	-	96	75.070
ENSCGRG00000000257	-	99	52.297	ENSCGRG00000005552	-	100	52.681
ENSCGRG00000000257	-	99	86.344	ENSCGRG00000003664	-	100	86.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000000257	-	100	82.735	ENSG00000090060	PAPOLA	100	82.735	Homo_sapiens
ENSCGRG00000000257	-	99	81.436	ENSAMEG00000014142	PAPOLA	99	81.436	Ailuropoda_melanoleuca
ENSCGRG00000000257	-	99	78.503	ENSAPLG00000006645	PAPOLA	99	78.503	Anas_platyrhynchos
ENSCGRG00000000257	-	99	79.161	ENSACAG00000013474	PAPOLA	99	83.763	Anolis_carolinensis
ENSCGRG00000000257	-	99	83.665	ENSANAG00000018274	PAPOLA	99	85.294	Aotus_nancymaae
ENSCGRG00000000257	-	74	77.903	ENSANAG00000027941	-	98	77.903	Aotus_nancymaae
ENSCGRG00000000257	-	100	64.448	ENSAMXG00000018141	papola	99	73.732	Astyanax_mexicanus
ENSCGRG00000000257	-	100	84.278	ENSBTAG00000004054	PAPOLA	100	84.278	Bos_taurus
ENSCGRG00000000257	-	100	83.708	ENSCJAG00000006512	PAPOLA	99	85.294	Callithrix_jacchus
ENSCGRG00000000257	-	100	81.208	ENSCAFG00000017783	PAPOLA	100	81.208	Canis_familiaris
ENSCGRG00000000257	-	100	83.124	ENSCAFG00020011550	PAPOLA	100	83.124	Canis_lupus_dingo
ENSCGRG00000000257	-	100	81.461	ENSCHIG00000025004	-	98	85.185	Capra_hircus
ENSCGRG00000000257	-	99	83.215	ENSTSYG00000012384	PAPOLA	99	83.215	Carlito_syrichta
ENSCGRG00000000257	-	100	80.737	ENSCPOG00000002648	PAPOLA	100	80.737	Cavia_porcellus
ENSCGRG00000000257	-	100	82.735	ENSCCAG00000025120	PAPOLA	100	82.735	Cebus_capucinus
ENSCGRG00000000257	-	100	82.735	ENSCATG00000018815	PAPOLA	99	85.475	Cercocebus_atys
ENSCGRG00000000257	-	100	84.278	ENSCLAG00000016342	PAPOLA	100	84.278	Chinchilla_lanigera
ENSCGRG00000000257	-	100	81.477	ENSCSAG00000010516	PAPOLA	100	81.477	Chlorocebus_sabaeus
ENSCGRG00000000257	-	74	70.027	ENSCHOG00000001115	PAPOLA	72	70.027	Choloepus_hoffmanni
ENSCGRG00000000257	-	100	79.595	ENSCPBG00000024125	PAPOLA	100	79.595	Chrysemys_picta_bellii
ENSCGRG00000000257	-	99	83.381	ENSCANG00000000159	PAPOLA	100	83.381	Colobus_angolensis_palliatus
ENSCGRG00000000257	-	100	86.402	ENSCGRG00001022693	-	100	86.402	Cricetulus_griseus_chok1gshd
ENSCGRG00000000257	-	99	73.984	ENSCGRG00001002732	-	98	76.138	Cricetulus_griseus_chok1gshd
ENSCGRG00000000257	-	100	87.568	ENSCGRG00001000229	-	99	90.244	Cricetulus_griseus_chok1gshd
ENSCGRG00000000257	-	89	42.344	ENSCSEG00000001841	-	74	47.791	Cynoglossus_semilaevis
ENSCGRG00000000257	-	100	62.347	ENSDARG00000009585	papola	100	62.347	Danio_rerio
ENSCGRG00000000257	-	68	83.617	ENSDORG00000013415	-	99	84.681	Dipodomys_ordii
ENSCGRG00000000257	-	99	70.163	ENSETEG00000004889	PAPOLA	100	70.163	Echinops_telfairi
ENSCGRG00000000257	-	100	61.518	ENSELUG00000018972	papola	100	61.252	Esox_lucius
ENSCGRG00000000257	-	100	85.014	ENSFCAG00000006784	PAPOLA	100	85.014	Felis_catus
ENSCGRG00000000257	-	99	74.211	ENSFALG00000002547	PAPOLA	98	74.211	Ficedula_albicollis
ENSCGRG00000000257	-	99	83.168	ENSFDAG00000010370	PAPOLA	100	83.168	Fukomys_damarensis
ENSCGRG00000000257	-	75	61.726	ENSGMOG00000010209	papola	100	61.770	Gadus_morhua
ENSCGRG00000000257	-	100	78.184	ENSGALG00000033099	PAPOLA	100	78.184	Gallus_gallus
ENSCGRG00000000257	-	66	48.017	ENSGACG00000006142	-	100	48.017	Gasterosteus_aculeatus
ENSCGRG00000000257	-	93	83.233	ENSGAGG00000020500	PAPOLA	99	83.233	Gopherus_agassizii
ENSCGRG00000000257	-	100	82.735	ENSGGOG00000006287	PAPOLA	100	82.735	Gorilla_gorilla
ENSCGRG00000000257	-	100	83.711	ENSHGLG00000007909	-	100	83.711	Heterocephalus_glaber_female
ENSCGRG00000000257	-	100	72.175	ENSHGLG00000007467	-	100	71.610	Heterocephalus_glaber_female
ENSCGRG00000000257	-	99	70.628	ENSHGLG00000017457	-	99	70.492	Heterocephalus_glaber_female
ENSCGRG00000000257	-	100	83.569	ENSHGLG00100017273	PAPOLA	100	83.569	Heterocephalus_glaber_male
ENSCGRG00000000257	-	100	59.108	ENSIPUG00000005919	papola	100	59.108	Ictalurus_punctatus
ENSCGRG00000000257	-	100	84.278	ENSSTOG00000011471	PAPOLA	100	84.278	Ictidomys_tridecemlineatus
ENSCGRG00000000257	-	99	83.499	ENSJJAG00000024340	Papola	100	83.499	Jaculus_jaculus
ENSCGRG00000000257	-	99	66.937	ENSLACG00000018136	PAPOLA	99	66.937	Latimeria_chalumnae
ENSCGRG00000000257	-	99	57.105	ENSLOCG00000008632	papola	99	57.239	Lepisosteus_oculatus
ENSCGRG00000000257	-	99	80.978	ENSLAFG00000000946	PAPOLA	99	80.978	Loxodonta_africana
ENSCGRG00000000257	-	100	82.735	ENSMFAG00000001792	PAPOLA	99	85.397	Macaca_fascicularis
ENSCGRG00000000257	-	99	83.662	ENSMMUG00000018610	PAPOLA	100	83.662	Macaca_mulatta
ENSCGRG00000000257	-	100	82.735	ENSMNEG00000043747	PAPOLA	100	83.662	Macaca_nemestrina
ENSCGRG00000000257	-	100	82.735	ENSMLEG00000032066	PAPOLA	100	82.735	Mandrillus_leucophaeus
ENSCGRG00000000257	-	83	78.387	ENSMGAG00000013228	-	100	78.387	Meleagris_gallopavo
ENSCGRG00000000257	-	100	86.119	ENSMAUG00000017178	Papola	100	86.119	Mesocricetus_auratus
ENSCGRG00000000257	-	100	84.441	ENSMICG00000010347	PAPOLA	100	84.441	Microcebus_murinus
ENSCGRG00000000257	-	100	86.119	ENSMOCG00000021670	Papola	100	86.119	Microtus_ochrogaster
ENSCGRG00000000257	-	99	72.083	ENSMODG00000001969	-	99	72.639	Monodelphis_domestica
ENSCGRG00000000257	-	100	81.326	ENSMODG00000012887	-	100	81.326	Monodelphis_domestica
ENSCGRG00000000257	-	100	85.269	MGP_CAROLIEiJ_G0018093	Papola	100	91.615	Mus_caroli
ENSCGRG00000000257	-	100	85.552	ENSMUSG00000021111	Papola	99	92.236	Mus_musculus
ENSCGRG00000000257	-	100	85.552	MGP_PahariEiJ_G0029850	Papola	100	92.236	Mus_pahari
ENSCGRG00000000257	-	100	85.694	MGP_SPRETEiJ_G0018943	Papola	100	92.547	Mus_spretus
ENSCGRG00000000257	-	100	82.273	ENSMPUG00000003054	PAPOLA	100	82.273	Mustela_putorius_furo
ENSCGRG00000000257	-	100	79.702	ENSMLUG00000010922	PAPOLA	100	79.702	Myotis_lucifugus
ENSCGRG00000000257	-	100	84.136	ENSNGAG00000022172	Papola	100	84.136	Nannospalax_galili
ENSCGRG00000000257	-	99	79.577	ENSNLEG00000000625	PAPOLA	100	79.577	Nomascus_leucogenys
ENSCGRG00000000257	-	64	64.885	ENSMEUG00000007831	-	74	63.780	Notamacropus_eugenii
ENSCGRG00000000257	-	97	77.639	ENSOPRG00000007625	PAPOLA	100	77.639	Ochotona_princeps
ENSCGRG00000000257	-	66	47.629	ENSONIG00000001062	-	98	47.629	Oreochromis_niloticus
ENSCGRG00000000257	-	99	83.523	ENSOANG00000013812	PAPOLA	99	83.523	Ornithorhynchus_anatinus
ENSCGRG00000000257	-	99	78.969	ENSOCUG00000011531	PAPOLA	99	78.969	Oryctolagus_cuniculus
ENSCGRG00000000257	-	100	81.892	ENSOGAG00000004611	PAPOLA	100	81.892	Otolemur_garnettii
ENSCGRG00000000257	-	100	82.003	ENSOARG00000016579	-	100	82.003	Ovis_aries
ENSCGRG00000000257	-	100	82.735	ENSPPAG00000030505	PAPOLA	100	82.735	Pan_paniscus
ENSCGRG00000000257	-	100	83.426	ENSPPRG00000008616	PAPOLA	100	83.426	Panthera_pardus
ENSCGRG00000000257	-	99	83.357	ENSPTIG00000018852	PAPOLA	99	83.357	Panthera_tigris_altaica
ENSCGRG00000000257	-	100	82.735	ENSPTRG00000006704	PAPOLA	100	82.735	Pan_troglodytes
ENSCGRG00000000257	-	100	82.735	ENSPANG00000025582	PAPOLA	100	83.662	Papio_anubis
ENSCGRG00000000257	-	100	60.795	ENSPKIG00000014471	papola	100	61.325	Paramormyrops_kingsleyae
ENSCGRG00000000257	-	100	80.108	ENSPSIG00000014157	PAPOLA	87	80.108	Pelodiscus_sinensis
ENSCGRG00000000257	-	100	85.977	ENSPEMG00000000043	Papola	100	85.977	Peromyscus_maniculatus_bairdii
ENSCGRG00000000257	-	100	83.916	ENSPCIG00000013234	PAPOLA	100	83.916	Phascolarctos_cinereus
ENSCGRG00000000257	-	100	79.597	ENSPPYG00000006128	PAPOLA	100	79.597	Pongo_abelii
ENSCGRG00000000257	-	88	80.488	ENSPCAG00000004199	PAPOLA	100	80.488	Procavia_capensis
ENSCGRG00000000257	-	99	80.540	ENSPCOG00000022117	PAPOLA	99	80.540	Propithecus_coquereli
ENSCGRG00000000257	-	100	81.030	ENSPVAG00000013925	PAPOLA	100	81.030	Pteropus_vampyrus
ENSCGRG00000000257	-	100	63.143	ENSPNAG00000010467	papola	100	63.282	Pygocentrus_nattereri
ENSCGRG00000000257	-	100	83.085	ENSRNOG00000004827	Papola	100	83.085	Rattus_norvegicus
ENSCGRG00000000257	-	99	83.099	ENSRBIG00000038490	PAPOLA	100	83.099	Rhinopithecus_bieti
ENSCGRG00000000257	-	100	82.597	ENSRROG00000025545	PAPOLA	100	82.597	Rhinopithecus_roxellana
ENSCGRG00000000257	-	99	83.521	ENSSBOG00000024061	PAPOLA	100	83.521	Saimiri_boliviensis_boliviensis
ENSCGRG00000000257	-	99	81.114	ENSSHAG00000015211	PAPOLA	99	81.114	Sarcophilus_harrisii
ENSCGRG00000000257	-	100	61.918	ENSSFOG00015004431	papola	98	75.277	Scleropages_formosus
ENSCGRG00000000257	-	67	51.033	ENSSDUG00000018247	-	72	51.033	Seriola_dumerili
ENSCGRG00000000257	-	100	78.784	ENSSPUG00000005835	PAPOLA	100	78.784	Sphenodon_punctatus
ENSCGRG00000000257	-	100	84.278	ENSSSCG00000002505	-	100	84.278	Sus_scrofa
ENSCGRG00000000257	-	99	77.989	ENSTGUG00000012687	PAPOLA	99	77.989	Taeniopygia_guttata
ENSCGRG00000000257	-	73	73.370	ENSTBEG00000000194	PAPOLA	75	73.370	Tupaia_belangeri
ENSCGRG00000000257	-	78	77.713	ENSTTRG00000005717	PAPOLA	78	77.713	Tursiops_truncatus
ENSCGRG00000000257	-	58	82.506	ENSUAMG00000025737	PAPOLA	99	82.742	Ursus_americanus
ENSCGRG00000000257	-	99	81.250	ENSVPAG00000006464	PAPOLA	100	81.250	Vicugna_pacos
ENSCGRG00000000257	-	100	84.278	ENSVVUG00000028340	PAPOLA	100	84.278	Vulpes_vulpes
ENSCGRG00000000257	-	100	73.098	ENSXETG00000013949	papola	100	73.098	Xenopus_tropicalis