EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000000307 (Gene tree)
Gene ID: -
Gene Symbol: Mtrex
Alias: 2610528A15Rik|Skiv2l2
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 63059 bases
Position: chrJH000392.1:1379322-1442380
Accession: 100768244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000000329	rRNA_proc-arch	PF13234.6	5.9e-87	1	1
ENSCGRP00000000330	rRNA_proc-arch	PF13234.6	5.9e-87	1	1
ENSCGRP00000000329	DEAD	PF00270.29	4.2e-17	1	1
ENSCGRP00000000330	DEAD	PF00270.29	4.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000000358	-	4429	-	ENSCGRP00000000329	1041 (aa)	XP_016822219	A0A061ICN7
ENSCGRT00000000359	-	4488	XM_003503435	ENSCGRP00000000330	1041 (aa)	XP_003503483	A0A061ICN7

Gene Model

Click here to download ENSCGRG00000000307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000000307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000000307	Mtrex	100	97.889	ENSG00000039123	MTREX	100	97.889	Homo_sapiens
ENSCGRG00000000307	Mtrex	100	83.286	ENSAPOG00000007814	mtrex	100	83.286	Acanthochromis_polyacanthus
ENSCGRG00000000307	Mtrex	100	97.411	ENSAMEG00000013856	MTREX	100	97.411	Ailuropoda_melanoleuca
ENSCGRG00000000307	Mtrex	100	82.201	ENSACIG00000015117	mtrex	96	88.088	Amphilophus_citrinellus
ENSCGRG00000000307	Mtrex	100	83.286	ENSAOCG00000011884	mtrex	100	83.286	Amphiprion_ocellaris
ENSCGRG00000000307	Mtrex	100	83.190	ENSAPEG00000019384	mtrex	100	83.190	Amphiprion_percula
ENSCGRG00000000307	Mtrex	100	84.065	ENSATEG00000015117	mtrex	100	84.065	Anabas_testudineus
ENSCGRG00000000307	Mtrex	94	93.795	ENSAPLG00000009694	MTREX	99	93.795	Anas_platyrhynchos
ENSCGRG00000000307	Mtrex	100	91.162	ENSACAG00000015200	MTREX	96	91.162	Anolis_carolinensis
ENSCGRG00000000307	Mtrex	100	97.793	ENSANAG00000023095	MTREX	100	97.793	Aotus_nancymaae
ENSCGRG00000000307	Mtrex	100	82.745	ENSACLG00000001921	mtrex	100	82.841	Astatotilapia_calliptera
ENSCGRG00000000307	Mtrex	97	81.809	ENSAMXG00000018751	mtrex	99	84.068	Astyanax_mexicanus
ENSCGRG00000000307	Mtrex	100	97.310	ENSBTAG00000010518	MTREX	100	97.310	Bos_taurus
ENSCGRG00000000307	Mtrex	91	53.733	WBGene00012342	mtr-4	95	53.055	Caenorhabditis_elegans
ENSCGRG00000000307	Mtrex	98	97.756	ENSCJAG00000001773	MTREX	100	96.756	Callithrix_jacchus
ENSCGRG00000000307	Mtrex	100	97.505	ENSCAFG00000006818	MTREX	100	97.505	Canis_familiaris
ENSCGRG00000000307	Mtrex	100	97.505	ENSCAFG00020024352	MTREX	100	97.505	Canis_lupus_dingo
ENSCGRG00000000307	Mtrex	100	97.313	ENSCHIG00000024413	MTREX	100	97.313	Capra_hircus
ENSCGRG00000000307	Mtrex	94	98.025	ENSTSYG00000007389	MTREX	100	98.025	Carlito_syrichta
ENSCGRG00000000307	Mtrex	96	72.946	ENSCAPG00000008696	MTREX	100	72.946	Cavia_aperea
ENSCGRG00000000307	Mtrex	100	97.121	ENSCPOG00000009797	MTREX	100	97.121	Cavia_porcellus
ENSCGRG00000000307	Mtrex	100	97.697	ENSCCAG00000014177	MTREX	100	97.697	Cebus_capucinus
ENSCGRG00000000307	Mtrex	100	97.793	ENSCATG00000042153	MTREX	100	97.793	Cercocebus_atys
ENSCGRG00000000307	Mtrex	100	96.929	ENSCLAG00000006622	MTREX	100	96.929	Chinchilla_lanigera
ENSCGRG00000000307	Mtrex	100	93.301	ENSCSAG00000016445	MTREX	100	93.301	Chlorocebus_sabaeus
ENSCGRG00000000307	Mtrex	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSCGRG00000000307	Mtrex	100	92.418	ENSCPBG00000026551	MTREX	94	92.514	Chrysemys_picta_bellii
ENSCGRG00000000307	Mtrex	99	66.380	ENSCING00000003239	-	99	66.411	Ciona_intestinalis
ENSCGRG00000000307	Mtrex	99	65.076	ENSCSAVG00000009304	-	100	69.892	Ciona_savignyi
ENSCGRG00000000307	Mtrex	100	97.697	ENSCANG00000035770	MTREX	100	97.697	Colobus_angolensis_palliatus
ENSCGRG00000000307	Mtrex	100	100.000	ENSCGRG00001024680	Mtrex	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000000307	Mtrex	100	82.027	ENSCSEG00000018621	mtrex	98	82.156	Cynoglossus_semilaevis
ENSCGRG00000000307	Mtrex	100	83.843	ENSCVAG00000004556	mtrex	100	83.779	Cyprinodon_variegatus
ENSCGRG00000000307	Mtrex	100	85.086	ENSDARG00000013457	mtrex	100	84.990	Danio_rerio
ENSCGRG00000000307	Mtrex	100	96.080	ENSDNOG00000015375	MTREX	100	95.985	Dasypus_novemcinctus
ENSCGRG00000000307	Mtrex	100	97.217	ENSDORG00000006782	Mtrex	100	97.217	Dipodomys_ordii
ENSCGRG00000000307	Mtrex	99	62.819	FBgn0001986	Mtr4	92	66.191	Drosophila_melanogaster
ENSCGRG00000000307	Mtrex	90	79.614	ENSETEG00000000727	MTREX	90	79.614	Echinops_telfairi
ENSCGRG00000000307	Mtrex	99	74.495	ENSEBUG00000012869	mtrex	99	73.876	Eptatretus_burgeri
ENSCGRG00000000307	Mtrex	100	97.217	ENSEASG00005013270	MTREX	100	97.217	Equus_asinus_asinus
ENSCGRG00000000307	Mtrex	100	97.313	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSCGRG00000000307	Mtrex	98	87.707	ENSEEUG00000000527	MTREX	100	87.707	Erinaceus_europaeus
ENSCGRG00000000307	Mtrex	98	84.951	ENSELUG00000004898	mtrex	100	89.496	Esox_lucius
ENSCGRG00000000307	Mtrex	100	97.505	ENSFCAG00000010575	MTREX	100	97.505	Felis_catus
ENSCGRG00000000307	Mtrex	100	90.586	ENSFALG00000010850	MTREX	100	90.586	Ficedula_albicollis
ENSCGRG00000000307	Mtrex	100	96.641	ENSFDAG00000011199	MTREX	100	96.641	Fukomys_damarensis
ENSCGRG00000000307	Mtrex	100	83.461	ENSFHEG00000023014	mtrex	100	82.017	Fundulus_heteroclitus
ENSCGRG00000000307	Mtrex	100	79.561	ENSGMOG00000014702	mtrex	100	79.847	Gadus_morhua
ENSCGRG00000000307	Mtrex	100	91.747	ENSGALG00000014709	MTREX	86	91.659	Gallus_gallus
ENSCGRG00000000307	Mtrex	100	83.954	ENSGAFG00000012425	mtrex	100	83.492	Gambusia_affinis
ENSCGRG00000000307	Mtrex	100	79.580	ENSGACG00000016260	mtrex	96	85.217	Gasterosteus_aculeatus
ENSCGRG00000000307	Mtrex	100	91.555	ENSGAGG00000020036	MTREX	100	91.483	Gopherus_agassizii
ENSCGRG00000000307	Mtrex	100	97.985	ENSGGOG00000001867	MTREX	100	97.985	Gorilla_gorilla
ENSCGRG00000000307	Mtrex	100	82.745	ENSHBUG00000006229	mtrex	100	82.841	Haplochromis_burtoni
ENSCGRG00000000307	Mtrex	100	96.929	ENSHGLG00000019445	SKIV2L2	100	96.929	Heterocephalus_glaber_female
ENSCGRG00000000307	Mtrex	100	96.929	ENSHGLG00100011833	SKIV2L2	100	96.929	Heterocephalus_glaber_male
ENSCGRG00000000307	Mtrex	91	84.725	ENSHCOG00000019995	mtrex	100	84.725	Hippocampus_comes
ENSCGRG00000000307	Mtrex	100	85.550	ENSIPUG00000024348	skiv2l2	100	85.455	Ictalurus_punctatus
ENSCGRG00000000307	Mtrex	100	97.697	ENSSTOG00000010802	MTREX	100	97.697	Ictidomys_tridecemlineatus
ENSCGRG00000000307	Mtrex	100	91.066	ENSJJAG00000020975	Mtrex	100	91.066	Jaculus_jaculus
ENSCGRG00000000307	Mtrex	100	82.824	ENSKMAG00000012642	mtrex	100	82.824	Kryptolebias_marmoratus
ENSCGRG00000000307	Mtrex	100	83.349	ENSLBEG00000019367	mtrex	99	86.131	Labrus_bergylta
ENSCGRG00000000307	Mtrex	100	88.782	ENSLACG00000009075	MTREX	100	88.325	Latimeria_chalumnae
ENSCGRG00000000307	Mtrex	100	87.344	ENSLOCG00000010186	mtrex	100	87.057	Lepisosteus_oculatus
ENSCGRG00000000307	Mtrex	99	95.010	ENSLAFG00000010497	MTREX	100	95.010	Loxodonta_africana
ENSCGRG00000000307	Mtrex	100	97.793	ENSMFAG00000031610	MTREX	100	97.793	Macaca_fascicularis
ENSCGRG00000000307	Mtrex	100	96.743	ENSMMUG00000010379	MTREX	100	96.743	Macaca_mulatta
ENSCGRG00000000307	Mtrex	100	97.793	ENSMNEG00000032746	MTREX	100	97.793	Macaca_nemestrina
ENSCGRG00000000307	Mtrex	100	97.793	ENSMLEG00000041051	MTREX	100	97.793	Mandrillus_leucophaeus
ENSCGRG00000000307	Mtrex	95	86.072	ENSMAMG00000016753	mtrex	96	88.413	Mastacembelus_armatus
ENSCGRG00000000307	Mtrex	100	82.745	ENSMZEG00005000414	mtrex	100	82.841	Maylandia_zebra
ENSCGRG00000000307	Mtrex	94	68.117	ENSMGAG00000003980	MTREX	99	68.117	Meleagris_gallopavo
ENSCGRG00000000307	Mtrex	100	99.328	ENSMAUG00000010727	Mtrex	100	99.328	Mesocricetus_auratus
ENSCGRG00000000307	Mtrex	100	98.081	ENSMICG00000012779	MTREX	100	98.081	Microcebus_murinus
ENSCGRG00000000307	Mtrex	100	99.040	ENSMOCG00000019886	Mtrex	100	99.040	Microtus_ochrogaster
ENSCGRG00000000307	Mtrex	100	81.757	ENSMMOG00000002476	mtrex	100	81.757	Mola_mola
ENSCGRG00000000307	Mtrex	100	93.180	ENSMODG00000019494	MTREX	100	93.276	Monodelphis_domestica
ENSCGRG00000000307	Mtrex	92	82.497	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSCGRG00000000307	Mtrex	100	97.983	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.983	Mus_caroli
ENSCGRG00000000307	Mtrex	100	98.367	ENSMUSG00000016018	Mtrex	100	98.367	Mus_musculus
ENSCGRG00000000307	Mtrex	100	98.175	MGP_PahariEiJ_G0015967	Mtrex	100	98.175	Mus_pahari
ENSCGRG00000000307	Mtrex	100	98.367	MGP_SPRETEiJ_G0019775	Mtrex	100	98.367	Mus_spretus
ENSCGRG00000000307	Mtrex	100	97.697	ENSMPUG00000007619	MTREX	100	97.697	Mustela_putorius_furo
ENSCGRG00000000307	Mtrex	100	95.594	ENSMLUG00000001152	MTREX	100	96.169	Myotis_lucifugus
ENSCGRG00000000307	Mtrex	100	98.081	ENSNGAG00000011938	Mtrex	100	98.081	Nannospalax_galili
ENSCGRG00000000307	Mtrex	100	82.841	ENSNBRG00000011293	mtrex	100	82.936	Neolamprologus_brichardi
ENSCGRG00000000307	Mtrex	100	93.774	ENSNLEG00000001494	MTREX	100	93.774	Nomascus_leucogenys
ENSCGRG00000000307	Mtrex	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSCGRG00000000307	Mtrex	100	82.517	ENSOPRG00000008009	MTREX	100	82.517	Ochotona_princeps
ENSCGRG00000000307	Mtrex	100	96.257	ENSODEG00000017234	MTREX	100	96.257	Octodon_degus
ENSCGRG00000000307	Mtrex	100	82.745	ENSONIG00000007587	mtrex	100	82.841	Oreochromis_niloticus
ENSCGRG00000000307	Mtrex	100	97.697	ENSOCUG00000004463	MTREX	100	97.697	Oryctolagus_cuniculus
ENSCGRG00000000307	Mtrex	100	82.762	ENSORLG00000005443	mtrex	100	82.762	Oryzias_latipes
ENSCGRG00000000307	Mtrex	100	82.667	ENSORLG00020006329	mtrex	100	82.667	Oryzias_latipes_hni
ENSCGRG00000000307	Mtrex	100	82.667	ENSORLG00015012924	mtrex	100	82.667	Oryzias_latipes_hsok
ENSCGRG00000000307	Mtrex	100	81.956	ENSOMEG00000008825	mtrex	100	81.956	Oryzias_melastigma
ENSCGRG00000000307	Mtrex	100	97.793	ENSOGAG00000002886	MTREX	100	97.793	Otolemur_garnettii
ENSCGRG00000000307	Mtrex	100	97.033	ENSOARG00000007764	MTREX	100	97.033	Ovis_aries
ENSCGRG00000000307	Mtrex	100	97.889	ENSPPAG00000039291	MTREX	100	97.889	Pan_paniscus
ENSCGRG00000000307	Mtrex	100	97.505	ENSPPRG00000019701	MTREX	100	97.505	Panthera_pardus
ENSCGRG00000000307	Mtrex	100	95.969	ENSPTIG00000009313	MTREX	100	95.969	Panthera_tigris_altaica
ENSCGRG00000000307	Mtrex	100	97.889	ENSPTRG00000016878	MTREX	100	97.889	Pan_troglodytes
ENSCGRG00000000307	Mtrex	100	97.697	ENSPANG00000009697	MTREX	100	97.697	Papio_anubis
ENSCGRG00000000307	Mtrex	100	86.616	ENSPKIG00000020833	mtrex	100	86.616	Paramormyrops_kingsleyae
ENSCGRG00000000307	Mtrex	100	92.131	ENSPSIG00000012150	MTREX	100	92.138	Pelodiscus_sinensis
ENSCGRG00000000307	Mtrex	100	81.393	ENSPMGG00000002582	mtrex	100	81.489	Periophthalmus_magnuspinnatus
ENSCGRG00000000307	Mtrex	95	65.261	ENSPMAG00000009668	mtrex	100	65.396	Petromyzon_marinus
ENSCGRG00000000307	Mtrex	91	96.727	ENSPCIG00000024730	MTREX	100	96.727	Phascolarctos_cinereus
ENSCGRG00000000307	Mtrex	75	87.072	ENSPFOG00000003141	mtrex	100	87.310	Poecilia_formosa
ENSCGRG00000000307	Mtrex	100	83.859	ENSPLAG00000021311	mtrex	100	83.668	Poecilia_latipinna
ENSCGRG00000000307	Mtrex	92	87.513	ENSPMEG00000010597	mtrex	99	87.828	Poecilia_mexicana
ENSCGRG00000000307	Mtrex	100	83.668	ENSPREG00000003089	mtrex	100	83.302	Poecilia_reticulata
ENSCGRG00000000307	Mtrex	98	97.951	ENSPPYG00000015469	MTREX	98	97.951	Pongo_abelii
ENSCGRG00000000307	Mtrex	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSCGRG00000000307	Mtrex	99	91.798	ENSPCOG00000018092	MTREX	100	91.053	Propithecus_coquereli
ENSCGRG00000000307	Mtrex	100	97.697	ENSPVAG00000002445	MTREX	100	97.697	Pteropus_vampyrus
ENSCGRG00000000307	Mtrex	100	82.650	ENSPNYG00000006164	mtrex	100	82.745	Pundamilia_nyererei
ENSCGRG00000000307	Mtrex	100	86.233	ENSPNAG00000008794	mtrex	100	86.233	Pygocentrus_nattereri
ENSCGRG00000000307	Mtrex	99	98.056	ENSRNOG00000010125	Mtrex	97	98.056	Rattus_norvegicus
ENSCGRG00000000307	Mtrex	100	96.065	ENSRBIG00000034930	MTREX	100	96.065	Rhinopithecus_bieti
ENSCGRG00000000307	Mtrex	100	97.793	ENSRROG00000039895	MTREX	100	97.793	Rhinopithecus_roxellana
ENSCGRG00000000307	Mtrex	89	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSCGRG00000000307	Mtrex	100	97.601	ENSSBOG00000026693	MTREX	100	97.601	Saimiri_boliviensis_boliviensis
ENSCGRG00000000307	Mtrex	96	95.186	ENSSHAG00000004600	MTREX	100	95.186	Sarcophilus_harrisii
ENSCGRG00000000307	Mtrex	100	87.464	ENSSFOG00015014355	skiv2l2	100	87.368	Scleropages_formosus
ENSCGRG00000000307	Mtrex	100	83.206	ENSSMAG00000007572	mtrex	100	83.206	Scophthalmus_maximus
ENSCGRG00000000307	Mtrex	100	83.763	ENSSDUG00000023789	mtrex	100	83.763	Seriola_dumerili
ENSCGRG00000000307	Mtrex	100	83.763	ENSSLDG00000006301	mtrex	100	83.763	Seriola_lalandi_dorsalis
ENSCGRG00000000307	Mtrex	100	94.146	ENSSARG00000008387	MTREX	100	94.146	Sorex_araneus
ENSCGRG00000000307	Mtrex	100	79.482	ENSSPUG00000007071	MTREX	100	79.561	Sphenodon_punctatus
ENSCGRG00000000307	Mtrex	100	81.670	ENSSPAG00000011319	mtrex	94	87.828	Stegastes_partitus
ENSCGRG00000000307	Mtrex	100	97.505	ENSSSCG00000016911	MTREX	100	97.505	Sus_scrofa
ENSCGRG00000000307	Mtrex	100	90.412	ENSTGUG00000002480	MTREX	100	90.202	Taeniopygia_guttata
ENSCGRG00000000307	Mtrex	100	83.111	ENSTRUG00000014571	mtrex	100	83.111	Takifugu_rubripes
ENSCGRG00000000307	Mtrex	100	81.670	ENSTBEG00000007769	MTREX	100	81.670	Tupaia_belangeri
ENSCGRG00000000307	Mtrex	100	97.118	ENSTTRG00000008678	MTREX	100	97.118	Tursiops_truncatus
ENSCGRG00000000307	Mtrex	100	97.313	ENSUAMG00000023061	MTREX	100	97.313	Ursus_americanus
ENSCGRG00000000307	Mtrex	100	96.743	ENSUMAG00000009373	MTREX	99	99.770	Ursus_maritimus
ENSCGRG00000000307	Mtrex	100	86.276	ENSVPAG00000011174	MTREX	100	86.276	Vicugna_pacos
ENSCGRG00000000307	Mtrex	100	97.697	ENSVVUG00000021337	MTREX	100	97.697	Vulpes_vulpes
ENSCGRG00000000307	Mtrex	100	89.091	ENSXETG00000032798	MTREX	100	88.804	Xenopus_tropicalis
ENSCGRG00000000307	Mtrex	100	83.668	ENSXMAG00000004799	mtrex	100	83.206	Xiphophorus_maculatus