EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000000411 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 4663 bases
Position: chrJH001909.1:198341-203003
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	1	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	2	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	3	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	4	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	5	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	6	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	7	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	8	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	9	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	10	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	11	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	12	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	13	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	14	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	15	16
ENSCGRP00000000464	zf-C2H2	PF00096.26	2.1e-87	16	16
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	1	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	2	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	3	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	4	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	5	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	6	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	7	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	8	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	9	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	10	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	11	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	12	13
ENSCGRP00000000466	zf-C2H2	PF00096.26	1.4e-73	13	13
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	1	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	2	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	3	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	4	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	5	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	6	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	7	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	8	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	9	10
ENSCGRP00000000465	zf-C2H2	PF00096.26	1.7e-60	10	10
ENSCGRP00000000464	zf-met	PF12874.7	1.4e-16	1	4
ENSCGRP00000000464	zf-met	PF12874.7	1.4e-16	2	4
ENSCGRP00000000464	zf-met	PF12874.7	1.4e-16	3	4
ENSCGRP00000000464	zf-met	PF12874.7	1.4e-16	4	4
ENSCGRP00000000466	zf-met	PF12874.7	1.5e-13	1	4
ENSCGRP00000000466	zf-met	PF12874.7	1.5e-13	2	4
ENSCGRP00000000466	zf-met	PF12874.7	1.5e-13	3	4
ENSCGRP00000000466	zf-met	PF12874.7	1.5e-13	4	4
ENSCGRP00000000465	zf-met	PF12874.7	2.3e-11	1	4
ENSCGRP00000000465	zf-met	PF12874.7	2.3e-11	2	4
ENSCGRP00000000465	zf-met	PF12874.7	2.3e-11	3	4
ENSCGRP00000000465	zf-met	PF12874.7	2.3e-11	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000000499	-	1659	-	ENSCGRP00000000466	553 (aa)	-	-
ENSCGRT00000000498	-	1443	-	ENSCGRP00000000465	481 (aa)	-	-
ENSCGRT00000000497	-	1959	-	ENSCGRP00000000464	653 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000000411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000000411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000000411	-	92	48.736	ENSCGRG00000006987	Zfp768	51	48.239
ENSCGRG00000000411	-	78	41.016	ENSCGRG00000010996	-	74	37.500
ENSCGRG00000000411	-	73	59.677	ENSCGRG00000008325	Bcl6b	50	59.677
ENSCGRG00000000411	-	98	53.627	ENSCGRG00000013919	Zfp709	99	53.627
ENSCGRG00000000411	-	100	59.564	ENSCGRG00000000632	-	99	60.738
ENSCGRG00000000411	-	100	51.027	ENSCGRG00000004206	-	100	50.637
ENSCGRG00000000411	-	73	51.020	ENSCGRG00000000462	Sall4	68	39.344
ENSCGRG00000000411	-	98	47.869	ENSCGRG00000000280	-	85	47.869
ENSCGRG00000000411	-	73	39.623	ENSCGRG00000009080	Snai1	50	39.623
ENSCGRG00000000411	-	99	48.472	ENSCGRG00000001582	Zkscan3	59	48.472
ENSCGRG00000000411	-	99	51.440	ENSCGRG00000016788	-	99	51.440
ENSCGRG00000000411	-	92	48.926	ENSCGRG00000016421	-	78	48.926
ENSCGRG00000000411	-	100	49.077	ENSCGRG00000008411	Gm3854	96	49.077
ENSCGRG00000000411	-	73	39.286	ENSCGRG00000014850	-	92	39.286
ENSCGRG00000000411	-	99	38.053	ENSCGRG00000016739	Zfp423	98	38.053
ENSCGRG00000000411	-	99	47.869	ENSCGRG00000010436	-	87	47.869
ENSCGRG00000000411	-	96	53.680	ENSCGRG00000015809	-	57	52.991
ENSCGRG00000000411	-	73	44.776	ENSCGRG00000013485	-	100	44.954
ENSCGRG00000000411	-	83	48.747	ENSCGRG00000015327	Zfp112	73	48.747
ENSCGRG00000000411	-	99	55.000	ENSCGRG00000008531	-	90	57.522
ENSCGRG00000000411	-	73	37.037	ENSCGRG00000012119	Snai2	50	37.037
ENSCGRG00000000411	-	99	49.508	ENSCGRG00000002730	Zfp39	92	49.508
ENSCGRG00000000411	-	75	34.756	ENSCGRG00000012333	Zfp574	90	31.566
ENSCGRG00000000411	-	99	53.333	ENSCGRG00000009742	-	97	51.082
ENSCGRG00000000411	-	74	37.762	ENSCGRG00000009462	Zfp236	70	42.857
ENSCGRG00000000411	-	99	51.906	ENSCGRG00000015629	-	71	51.906
ENSCGRG00000000411	-	92	38.462	ENSCGRG00000014598	Zfp319	91	38.356
ENSCGRG00000000411	-	72	40.104	ENSCGRG00000015472	Repin1	84	40.104
ENSCGRG00000000411	-	88	50.943	ENSCGRG00000009095	Zfp202	65	50.943
ENSCGRG00000000411	-	99	52.044	ENSCGRG00000012088	Zfp560	89	52.044
ENSCGRG00000000411	-	88	39.502	ENSCGRG00000017618	Zfp408	50	38.053
ENSCGRG00000000411	-	99	51.966	ENSCGRG00000014813	Zfp454	99	51.966
ENSCGRG00000000411	-	72	39.535	ENSCGRG00000001380	Scrt2	63	39.535
ENSCGRG00000000411	-	97	60.563	ENSCGRG00000000778	-	97	64.135
ENSCGRG00000000411	-	99	44.681	ENSCGRG00000008922	2610008E11Rik	95	44.681
ENSCGRG00000000411	-	63	44.776	ENSCGRG00000009496	Sall1	57	33.333
ENSCGRG00000000411	-	99	54.292	ENSCGRG00000018332	Zfp53	93	54.292
ENSCGRG00000000411	-	99	69.444	ENSCGRG00000013626	Zfp715	77	67.500
ENSCGRG00000000411	-	92	51.592	ENSCGRG00000017528	Zfp94	77	51.592
ENSCGRG00000000411	-	74	37.419	ENSCGRG00000004814	Patz1	62	37.129
ENSCGRG00000000411	-	99	50.761	ENSCGRG00000015037	Zfp354a	98	50.761
ENSCGRG00000000411	-	73	37.778	ENSCGRG00000014932	Snai3	60	37.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000000411	-	99	78.660	ENSMAUG00000009331	-	99	75.726	Mesocricetus_auratus
ENSCGRG00000000411	-	99	68.701	ENSMOCG00000001762	-	99	68.701	Microtus_ochrogaster
ENSCGRG00000000411	-	100	62.060	ENSMUSG00000059142	Zfp945	100	61.488	Mus_musculus
ENSCGRG00000000411	-	99	64.156	ENSMUSG00000069743	Zfp820	96	64.156	Mus_musculus
ENSCGRG00000000411	-	100	58.603	MGP_PahariEiJ_G0023460	Zfp945	97	58.058	Mus_pahari
ENSCGRG00000000411	-	100	62.060	MGP_SPRETEiJ_G0022052	Zfp945	100	61.488	Mus_spretus
ENSCGRG00000000411	-	99	55.254	ENSRNOG00000061533	AABR07001926.3	99	61.165	Rattus_norvegicus