EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCGRG00000000461 (Gene tree)
Gene ID
-
Gene Symbol
Patl1
Alias
Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Cricetulus_griseus_crigri
Status
putative
Strand
Minus strand
Length
30095 bases
Position
chrJH004284.1:15970-46064
Accession
100752804
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00000000535PAT1PF09770.93.8e-1911
ENSCGRP00000000534PAT1PF09770.97.8e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00000000569-4014XM_007607573ENSCGRP00000000534765 (aa)XP_007605763-
ENSCGRT00000000570-2316-ENSCGRP00000000535771 (aa)--
Gene Model
Click here to download ENSCGRG00000000461's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000000461's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00000000461Patl16335.510ENSG00000229474PATL29937.637Homo_sapiens
ENSCGRG00000000461Patl110096.471ENSG00000166889PATL110095.979Homo_sapiens
ENSCGRG00000000461Patl18653.477ENSAPOG00000021290patl19848.765Acanthochromis_polyacanthus
ENSCGRG00000000461Patl16834.133ENSAPOG00000022988patl27333.641Acanthochromis_polyacanthus
ENSCGRG00000000461Patl16234.908ENSAMEG00000014997PATL27536.408Ailuropoda_melanoleuca
ENSCGRG00000000461Patl110095.561ENSAMEG00000014215PATL19994.648Ailuropoda_melanoleuca
ENSCGRG00000000461Patl19645.747ENSACIG00000005182patl19946.087Amphilophus_citrinellus
ENSCGRG00000000461Patl15453.606ENSAOCG00000021993patl19547.187Amphiprion_ocellaris
ENSCGRG00000000461Patl18831.025ENSAOCG00000023738patl25634.029Amphiprion_ocellaris
ENSCGRG00000000461Patl15975.000ENSAPEG00000021391patl17864.912Amphiprion_percula
ENSCGRG00000000461Patl16733.915ENSAPEG00000011299patl27133.597Amphiprion_percula
ENSCGRG00000000461Patl18978.788ENSATEG00000002230patl17967.308Anabas_testudineus
ENSCGRG00000000461Patl16434.517ENSATEG00000019567patl27034.122Anabas_testudineus
ENSCGRG00000000461Patl15439.225ENSAPLG00000003980PATL26439.225Anas_platyrhynchos
ENSCGRG00000000461Patl17170.471ENSAPLG00000013394PATL19970.492Anas_platyrhynchos
ENSCGRG00000000461Patl110080.704ENSACAG00000006607PATL19979.922Anolis_carolinensis
ENSCGRG00000000461Patl110096.601ENSANAG00000023078PATL110096.109Aotus_nancymaae
ENSCGRG00000000461Patl16167.308ENSACLG00000005144patl18350.617Astatotilapia_calliptera
ENSCGRG00000000461Patl18831.905ENSACLG00000010326patl25437.470Astatotilapia_calliptera
ENSCGRG00000000461Patl16535.039ENSAMXG00000020293patl26334.591Astyanax_mexicanus
ENSCGRG00000000461Patl18952.871ENSAMXG00000010731patl19946.125Astyanax_mexicanus
ENSCGRG00000000461Patl110094.778ENSBTAG00000005913PATL110094.301Bos_taurus
ENSCGRG00000000461Patl16335.597ENSCJAG00000002379PATL27237.440Callithrix_jacchus
ENSCGRG00000000461Patl110096.340ENSCJAG00000016192PATL110095.850Callithrix_jacchus
ENSCGRG00000000461Patl16435.644ENSCAFG00000013629PATL27237.923Canis_familiaris
ENSCGRG00000000461Patl110095.822ENSCAFG00000007581PATL110094.430Canis_familiaris
ENSCGRG00000000461Patl16435.644ENSCAFG00020022169PATL27237.923Canis_lupus_dingo
ENSCGRG00000000461Patl19995.789ENSCAFG00020001648PATL110094.386Canis_lupus_dingo
ENSCGRG00000000461Patl16337.603ENSCHIG00000026665PATL27439.141Capra_hircus
ENSCGRG00000000461Patl110093.603ENSCHIG00000025913PATL110093.135Capra_hircus
ENSCGRG00000000461Patl19995.801ENSTSYG00000012748PATL19695.312Carlito_syrichta
ENSCGRG00000000461Patl110091.004ENSCAPG00000013668PATL19991.004Cavia_aperea
ENSCGRG00000000461Patl110088.790ENSCPOG00000006827PATL110088.496Cavia_porcellus
ENSCGRG00000000461Patl110096.601ENSCCAG00000023759PATL110096.109Cebus_capucinus
ENSCGRG00000000461Patl110096.601ENSCATG00000009629PATL110096.109Cercocebus_atys
ENSCGRG00000000461Patl15135.459ENSCLAG00000014407PATL27335.459Chinchilla_lanigera
ENSCGRG00000000461Patl110092.026ENSCLAG00000003427PATL110092.026Chinchilla_lanigera
ENSCGRG00000000461Patl19196.835ENSCSAG00000006095PATL110096.835Chlorocebus_sabaeus
ENSCGRG00000000461Patl16896.970ENSCHOG00000001611PATL18396.970Choloepus_hoffmanni
ENSCGRG00000000461Patl15439.806ENSCPBG00000006150PATL25939.806Chrysemys_picta_bellii
ENSCGRG00000000461Patl16334.827ENSCANG00000013856PATL27237.590Colobus_angolensis_palliatus
ENSCGRG00000000461Patl110096.732ENSCANG00000039197PATL19997.033Colobus_angolensis_palliatus
ENSCGRG00000000461Patl1100100.000ENSCGRG00001024927Patl110099.481Cricetulus_griseus_chok1gshd
ENSCGRG00000000461Patl18876.667ENSCSEG00000008261patl18255.814Cynoglossus_semilaevis
ENSCGRG00000000461Patl16234.504ENSCSEG00000009438patl25735.613Cynoglossus_semilaevis
ENSCGRG00000000461Patl15930.000ENSCVAG00000016203patl26330.303Cyprinodon_variegatus
ENSCGRG00000000461Patl18951.675ENSCVAG00000006664patl110046.329Cyprinodon_variegatus
ENSCGRG00000000461Patl19946.723ENSDARG00000017423patl110046.200Danio_rerio
ENSCGRG00000000461Patl16834.906ENSDARG00000089567patl26435.516Danio_rerio
ENSCGRG00000000461Patl110088.773ENSDNOG00000038865PATL19893.738Dasypus_novemcinctus
ENSCGRG00000000461Patl15137.084ENSDORG00000026649Patl27237.084Dipodomys_ordii
ENSCGRG00000000461Patl110095.686ENSDORG00000000237Patl110095.201Dipodomys_ordii
ENSCGRG00000000461Patl110095.437ENSEASG00005007963PATL110094.955Equus_asinus_asinus
ENSCGRG00000000461Patl110095.306ENSECAG00000011411PATL110094.825Equus_caballus
ENSCGRG00000000461Patl16934.019ENSELUG00000023244patl25436.842Esox_lucius
ENSCGRG00000000461Patl18671.429ENSELUG00000024249patl17967.308Esox_lucius
ENSCGRG00000000461Patl16335.583ENSFCAG00000027170PATL27336.715Felis_catus
ENSCGRG00000000461Patl110095.817ENSFCAG00000015573PATL110095.331Felis_catus
ENSCGRG00000000461Patl110080.469ENSFALG00000012150PATL19980.469Ficedula_albicollis
ENSCGRG00000000461Patl110091.503ENSFDAG00000016128PATL110091.242Fukomys_damarensis
ENSCGRG00000000461Patl15234.673ENSFDAG00000012242PATL27336.432Fukomys_damarensis
ENSCGRG00000000461Patl16167.308ENSFHEG00000017790patl18357.746Fundulus_heteroclitus
ENSCGRG00000000461Patl15733.632ENSGMOG00000005666patl29934.762Gadus_morhua
ENSCGRG00000000461Patl19977.500ENSGALG00000042641PATL19977.368Gallus_gallus
ENSCGRG00000000461Patl19830.628ENSGAFG00000019344patl25537.831Gambusia_affinis
ENSCGRG00000000461Patl16360.317ENSGAFG00000006508patl18360.317Gambusia_affinis
ENSCGRG00000000461Patl19948.072ENSGACG00000016448patl19949.808Gasterosteus_aculeatus
ENSCGRG00000000461Patl110083.854ENSGAGG00000004461PATL110084.097Gopherus_agassizii
ENSCGRG00000000461Patl16335.714ENSGGOG00000025923PATL28535.318Gorilla_gorilla
ENSCGRG00000000461Patl110096.732ENSGGOG00000004335PATL110096.239Gorilla_gorilla
ENSCGRG00000000461Patl15935.532ENSHBUG00000005929patl26136.754Haplochromis_burtoni
ENSCGRG00000000461Patl16167.308ENSHBUG00000005365patl18350.617Haplochromis_burtoni
ENSCGRG00000000461Patl110092.810ENSHGLG00000018173PATL110092.348Heterocephalus_glaber_female
ENSCGRG00000000461Patl110091.242ENSHGLG00100003453PATL110091.242Heterocephalus_glaber_male
ENSCGRG00000000461Patl19830.829ENSHCOG00000016754patl26034.519Hippocampus_comes
ENSCGRG00000000461Patl19165.385ENSHCOG00000001898patl18251.899Hippocampus_comes
ENSCGRG00000000461Patl16832.895ENSIPUG00000020692patl25835.129Ictalurus_punctatus
ENSCGRG00000000461Patl15437.590ENSSTOG00000033848PATL27237.831Ictidomys_tridecemlineatus
ENSCGRG00000000461Patl19996.306ENSSTOG00000013764PATL19996.306Ictidomys_tridecemlineatus
ENSCGRG00000000461Patl19995.157ENSJJAG00000010135Patl110095.157Jaculus_jaculus
ENSCGRG00000000461Patl15980.000ENSKMAG00000020848patl17965.385Kryptolebias_marmoratus
ENSCGRG00000000461Patl16235.220ENSLBEG00000022344patl25834.792Labrus_bergylta
ENSCGRG00000000461Patl19169.231ENSLBEG00000023617patl17869.231Labrus_bergylta
ENSCGRG00000000461Patl19831.303ENSLACG00000005291-9730.797Latimeria_chalumnae
ENSCGRG00000000461Patl19956.697ENSLACG00000004640PATL19956.161Latimeria_chalumnae
ENSCGRG00000000461Patl19947.317ENSLOCG00000000717patl19947.805Lepisosteus_oculatus
ENSCGRG00000000461Patl15138.107ENSLAFG00000031124PATL27138.107Loxodonta_africana
ENSCGRG00000000461Patl110096.084ENSLAFG00000015161PATL110095.596Loxodonta_africana
ENSCGRG00000000461Patl110096.601ENSMFAG00000040851PATL110096.109Macaca_fascicularis
ENSCGRG00000000461Patl110096.601ENSMMUG00000017287PATL110096.109Macaca_mulatta
ENSCGRG00000000461Patl110096.601ENSMNEG00000038692PATL110096.109Macaca_nemestrina
ENSCGRG00000000461Patl110096.471ENSMLEG00000030044PATL110095.979Mandrillus_leucophaeus
ENSCGRG00000000461Patl19645.571ENSMAMG00000003950patl19847.441Mastacembelus_armatus
ENSCGRG00000000461Patl16134.322ENSMAMG00000013327patl26135.492Mastacembelus_armatus
ENSCGRG00000000461Patl18831.905ENSMZEG00005014292patl25437.470Maylandia_zebra
ENSCGRG00000000461Patl16167.308ENSMZEG00005013404patl18350.617Maylandia_zebra
ENSCGRG00000000461Patl19377.669ENSMGAG00000003406PATL19976.653Meleagris_gallopavo
ENSCGRG00000000461Patl18699.080ENSMAUG00000012059Patl19799.080Mesocricetus_auratus
ENSCGRG00000000461Patl19992.388ENSMICG00000004172PATL19896.367Microcebus_murinus
ENSCGRG00000000461Patl110098.693ENSMOCG00000010087Patl110098.184Microtus_ochrogaster
ENSCGRG00000000461Patl15536.512ENSMOCG00000015367Patl27237.065Microtus_ochrogaster
ENSCGRG00000000461Patl19946.684ENSMMOG00000013711patl110045.736Mola_mola
ENSCGRG00000000461Patl16230.398ENSMMOG00000001299patl26032.057Mola_mola
ENSCGRG00000000461Patl110088.527ENSMODG00000020201PATL110087.451Monodelphis_domestica
ENSCGRG00000000461Patl16336.531ENSMODG00000017690PATL27136.993Monodelphis_domestica
ENSCGRG00000000461Patl17855.764ENSMALG00000018706patl19943.580Monopterus_albus
ENSCGRG00000000461Patl15434.845ENSMALG00000008131patl25234.845Monopterus_albus
ENSCGRG00000000461Patl110096.863MGP_CAROLIEiJ_G0022739Patl110096.368Mus_caroli
ENSCGRG00000000461Patl110096.993ENSMUSG00000046139Patl110096.498Mus_musculus
ENSCGRG00000000461Patl110096.601MGP_PahariEiJ_G0014233Patl110096.109Mus_pahari
ENSCGRG00000000461Patl110097.124MGP_SPRETEiJ_G0023652Patl110096.628Mus_spretus
ENSCGRG00000000461Patl110095.953ENSMPUG00000014607PATL110094.560Mustela_putorius_furo
ENSCGRG00000000461Patl110092.820ENSMLUG00000011169PATL110091.969Myotis_lucifugus
ENSCGRG00000000461Patl110095.319ENSNGAG00000003682Patl110094.839Nannospalax_galili
ENSCGRG00000000461Patl16334.917ENSNBRG00000011745patl25836.516Neolamprologus_brichardi
ENSCGRG00000000461Patl16335.714ENSNLEG00000005673PATL28535.391Nomascus_leucogenys
ENSCGRG00000000461Patl19993.149ENSNLEG00000013081PATL110092.549Nomascus_leucogenys
ENSCGRG00000000461Patl16790.968ENSMEUG00000009391PATL18990.968Notamacropus_eugenii
ENSCGRG00000000461Patl16895.707ENSOPRG00000007963PATL18095.707Ochotona_princeps
ENSCGRG00000000461Patl17390.438ENSODEG00000001792PATL19590.941Octodon_degus
ENSCGRG00000000461Patl16336.495ENSONIG00000011519patl25438.005Oreochromis_niloticus
ENSCGRG00000000461Patl16167.308ENSONIG00000004170patl110048.124Oreochromis_niloticus
ENSCGRG00000000461Patl15137.871ENSOANG00000001538-8438.025Ornithorhynchus_anatinus
ENSCGRG00000000461Patl15287.154ENSOANG00000011117-9787.154Ornithorhynchus_anatinus
ENSCGRG00000000461Patl110096.732ENSOCUG00000002156PATL110096.239Oryctolagus_cuniculus
ENSCGRG00000000461Patl16135.095ENSOCUG00000006339PATL27436.750Oryctolagus_cuniculus
ENSCGRG00000000461Patl16433.333ENSORLG00000005780patl26033.958Oryzias_latipes
ENSCGRG00000000461Patl16433.730ENSORLG00020016506patl26133.465Oryzias_latipes_hni
ENSCGRG00000000461Patl16433.532ENSORLG00015014500patl26034.167Oryzias_latipes_hsok
ENSCGRG00000000461Patl18831.965ENSOMEG00000021628patl26235.062Oryzias_melastigma
ENSCGRG00000000461Patl110096.732ENSOGAG00000004351PATL110096.239Otolemur_garnettii
ENSCGRG00000000461Patl15436.562ENSOGAG00000004709PATL27236.562Otolemur_garnettii
ENSCGRG00000000461Patl15338.025ENSOARG00000003762PATL27238.025Ovis_aries
ENSCGRG00000000461Patl110093.734ENSOARG00000012005PATL19693.734Ovis_aries
ENSCGRG00000000461Patl16335.845ENSPPAG00000007221PATL28435.318Pan_paniscus
ENSCGRG00000000461Patl110096.601ENSPPAG00000034275PATL110096.109Pan_paniscus
ENSCGRG00000000461Patl16335.306ENSPPRG00000004279PATL27336.473Panthera_pardus
ENSCGRG00000000461Patl110095.686ENSPPRG00000020639PATL110095.686Panthera_pardus
ENSCGRG00000000461Patl110095.686ENSPTIG00000019298PATL110095.201Panthera_tigris_altaica
ENSCGRG00000000461Patl16335.174ENSPTIG00000018964PATL27336.232Panthera_tigris_altaica
ENSCGRG00000000461Patl16335.510ENSPTRG00000041536PATL28435.113Pan_troglodytes
ENSCGRG00000000461Patl19987.879ENSPTRG00000003697PATL110087.451Pan_troglodytes
ENSCGRG00000000461Patl110096.601ENSPANG00000035620PATL110096.109Papio_anubis
ENSCGRG00000000461Patl19946.446ENSPKIG00000016224patl19947.549Paramormyrops_kingsleyae
ENSCGRG00000000461Patl110083.594ENSPSIG00000016206PATL19682.817Pelodiscus_sinensis
ENSCGRG00000000461Patl15437.709ENSPSIG00000017690PATL29536.855Pelodiscus_sinensis
ENSCGRG00000000461Patl15935.220ENSPMGG00000014550patl26336.105Periophthalmus_magnuspinnatus
ENSCGRG00000000461Patl16167.308ENSPMGG00000002644patl19945.267Periophthalmus_magnuspinnatus
ENSCGRG00000000461Patl110098.824ENSPEMG00000014215Patl110098.314Peromyscus_maniculatus_bairdii
ENSCGRG00000000461Patl15835.153ENSPEMG00000016509Patl27037.084Peromyscus_maniculatus_bairdii
ENSCGRG00000000461Patl110088.657ENSPCIG00000010852PATL110087.581Phascolarctos_cinereus
ENSCGRG00000000461Patl16534.127ENSPCIG00000018256PATL27636.881Phascolarctos_cinereus
ENSCGRG00000000461Patl19831.202ENSPFOG00000007305patl25437.349Poecilia_formosa
ENSCGRG00000000461Patl110045.888ENSPFOG00000007768patl110046.667Poecilia_formosa
ENSCGRG00000000461Patl15553.682ENSPLAG00000018465patl17550.989Poecilia_latipinna
ENSCGRG00000000461Patl19831.291ENSPLAG00000020713patl25437.349Poecilia_latipinna
ENSCGRG00000000461Patl19831.777ENSPMEG00000018942patl25437.349Poecilia_mexicana
ENSCGRG00000000461Patl18549.924ENSPMEG00000006555patl17550.302Poecilia_mexicana
ENSCGRG00000000461Patl17448.336ENSPREG00000003874patl17050.263Poecilia_reticulata
ENSCGRG00000000461Patl110096.993ENSPPYG00000003230PATL110096.498Pongo_abelii
ENSCGRG00000000461Patl15438.406ENSPCOG00000000295PATL29939.011Propithecus_coquereli
ENSCGRG00000000461Patl110096.471ENSPCOG00000020770PATL110095.979Propithecus_coquereli
ENSCGRG00000000461Patl18690.396ENSPVAG00000015239PATL110089.939Pteropus_vampyrus
ENSCGRG00000000461Patl15935.106ENSPNYG00000017381patl26136.277Pundamilia_nyererei
ENSCGRG00000000461Patl18653.172ENSPNYG00000018936patl19653.153Pundamilia_nyererei
ENSCGRG00000000461Patl19945.542ENSPNAG00000017907patl19946.867Pygocentrus_nattereri
ENSCGRG00000000461Patl16235.565ENSPNAG00000002315patl26334.728Pygocentrus_nattereri
ENSCGRG00000000461Patl110096.863ENSRNOG00000021052Patl110096.368Rattus_norvegicus
ENSCGRG00000000461Patl110086.375ENSRBIG00000032263PATL110085.980Rhinopithecus_bieti
ENSCGRG00000000461Patl110096.732ENSRROG00000032861PATL110096.239Rhinopithecus_roxellana
ENSCGRG00000000461Patl110096.471ENSSBOG00000025195PATL110095.979Saimiri_boliviensis_boliviensis
ENSCGRG00000000461Patl110089.207ENSSHAG00000004309PATL110088.129Sarcophilus_harrisii
ENSCGRG00000000461Patl18732.988ENSSFOG00015000720patl25537.204Scleropages_formosus
ENSCGRG00000000461Patl16534.263ENSSMAG00000017262patl27433.597Scophthalmus_maximus
ENSCGRG00000000461Patl19161.538ENSSMAG00000009482patl18151.852Scophthalmus_maximus
ENSCGRG00000000461Patl19169.231ENSSDUG00000005362patl17769.231Seriola_dumerili
ENSCGRG00000000461Patl16335.124ENSSDUG00000022927patl26034.161Seriola_dumerili
ENSCGRG00000000461Patl16834.082ENSSLDG00000017922patl25936.538Seriola_lalandi_dorsalis
ENSCGRG00000000461Patl19167.308ENSSLDG00000019146patl17767.308Seriola_lalandi_dorsalis
ENSCGRG00000000461Patl15136.616ENSSARG00000009047PATL27636.616Sorex_araneus
ENSCGRG00000000461Patl18095.085ENSSARG00000009600PATL18095.085Sorex_araneus
ENSCGRG00000000461Patl110081.723ENSSPUG00000009453PATL110080.699Sphenodon_punctatus
ENSCGRG00000000461Patl15453.237ENSSPAG00000003187patl19847.153Stegastes_partitus
ENSCGRG00000000461Patl16134.316ENSSPAG00000004784patl26235.446Stegastes_partitus
ENSCGRG00000000461Patl110096.214ENSSSCG00000013124PATL110095.725Sus_scrofa
ENSCGRG00000000461Patl110079.896ENSTGUG00000006222PATL110079.740Taeniopygia_guttata
ENSCGRG00000000461Patl15237.284ENSTGUG00000004619-9837.624Taeniopygia_guttata
ENSCGRG00000000461Patl19165.385ENSTRUG00000000709patl19944.704Takifugu_rubripes
ENSCGRG00000000461Patl16234.238ENSTRUG00000005647patl26234.447Takifugu_rubripes
ENSCGRG00000000461Patl19094.406ENSTBEG00000000796PATL19094.406Tupaia_belangeri
ENSCGRG00000000461Patl17296.795ENSTTRG00000009389PATL18496.795Tursiops_truncatus
ENSCGRG00000000461Patl16334.969ENSUAMG00000018533PATL27136.232Ursus_americanus
ENSCGRG00000000461Patl16335.583ENSUMAG00000007738PATL27136.715Ursus_maritimus
ENSCGRG00000000461Patl19995.658ENSUMAG00000018634PATL110094.828Ursus_maritimus
ENSCGRG00000000461Patl16597.222ENSVPAG00000009224PATL17697.222Vicugna_pacos
ENSCGRG00000000461Patl16435.928ENSVVUG00000011576PATL27237.923Vulpes_vulpes
ENSCGRG00000000461Patl110095.822ENSVVUG00000016668PATL110094.971Vulpes_vulpes
ENSCGRG00000000461Patl15437.681ENSXETG00000014167patl27535.425Xenopus_tropicalis
ENSCGRG00000000461Patl16163.462ENSXCOG00000010808patl19763.462Xiphophorus_couchianus
ENSCGRG00000000461Patl19830.153ENSXMAG00000018464patl25437.108Xiphophorus_maculatus
ENSCGRG00000000461Patl16265.385ENSXMAG00000013834patl18165.385Xiphophorus_maculatus

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