EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000000490 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 14430 bases
Position: chrJH000352.1:289975-304404
Accession: 100764953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000000582	LSM	PF01423.22	6e-19	1	1
ENSCGRP00000000583	LSM	PF01423.22	6.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000000617	-	817	XM_003503007	ENSCGRP00000000582	119 (aa)	XP_003503055	G3HGH4
ENSCGRT00000000618	-	372	-	ENSCGRP00000000583	123 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000000490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000000490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000000490	-	81	75.000	ENSCGRG00000006224	-	85	75.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000000490	-	100	100.000	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSCGRG00000000490	-	100	96.639	ENSAPOG00000019446	snrpd1	65	96.639	Acanthochromis_polyacanthus
ENSCGRG00000000490	-	98	98.291	ENSAMEG00000002576	SNRPD1	100	100.000	Ailuropoda_melanoleuca
ENSCGRG00000000490	-	94	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSCGRG00000000490	-	100	96.639	ENSAOCG00000007406	snrpd1	100	96.639	Amphiprion_ocellaris
ENSCGRG00000000490	-	94	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSCGRG00000000490	-	100	92.437	ENSAPEG00000014961	snrpd1	100	92.437	Amphiprion_percula
ENSCGRG00000000490	-	100	96.639	ENSATEG00000014399	snrpd1	100	96.639	Anabas_testudineus
ENSCGRG00000000490	-	97	100.000	ENSAPLG00000012256	SNRPD1	100	98.319	Anas_platyrhynchos
ENSCGRG00000000490	-	100	100.000	ENSACAG00000006364	SNRPD1	100	100.000	Anolis_carolinensis
ENSCGRG00000000490	-	100	100.000	ENSANAG00000025641	SNRPD1	100	100.000	Aotus_nancymaae
ENSCGRG00000000490	-	94	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSCGRG00000000490	-	100	97.479	ENSAMXG00000004589	snrpd1	100	97.479	Astyanax_mexicanus
ENSCGRG00000000490	-	79	94.681	ENSBTAG00000055316	-	87	90.099	Bos_taurus
ENSCGRG00000000490	-	100	100.000	ENSBTAG00000008292	SNRPD1	100	100.000	Bos_taurus
ENSCGRG00000000490	-	95	95.726	ENSBTAG00000047266	-	98	95.726	Bos_taurus
ENSCGRG00000000490	-	97	96.522	ENSBTAG00000012376	-	86	96.522	Bos_taurus
ENSCGRG00000000490	-	74	80.682	WBGene00004916	snr-3	76	76.042	Caenorhabditis_elegans
ENSCGRG00000000490	-	100	100.000	ENSCJAG00000042955	SNRPD1	100	100.000	Callithrix_jacchus
ENSCGRG00000000490	-	100	100.000	ENSCAFG00000018247	SNRPD1	100	100.000	Canis_familiaris
ENSCGRG00000000490	-	80	100.000	ENSCAFG00020015914	SNRPD1	74	100.000	Canis_lupus_dingo
ENSCGRG00000000490	-	100	97.479	ENSCHIG00000005557	SNRPD1	100	97.479	Capra_hircus
ENSCGRG00000000490	-	100	100.000	ENSTSYG00000030028	SNRPD1	100	100.000	Carlito_syrichta
ENSCGRG00000000490	-	97	99.130	ENSCAPG00000008103	SNRPD1	100	98.276	Cavia_aperea
ENSCGRG00000000490	-	100	100.000	ENSCPOG00000004679	SNRPD1	100	100.000	Cavia_porcellus
ENSCGRG00000000490	-	81	95.833	ENSCCAG00000005390	-	81	95.833	Cebus_capucinus
ENSCGRG00000000490	-	100	100.000	ENSCCAG00000032658	SNRPD1	100	100.000	Cebus_capucinus
ENSCGRG00000000490	-	100	99.160	ENSCCAG00000020611	-	100	99.160	Cebus_capucinus
ENSCGRG00000000490	-	100	96.639	ENSCCAG00000016652	-	100	96.639	Cebus_capucinus
ENSCGRG00000000490	-	100	100.000	ENSCATG00000039978	SNRPD1	100	100.000	Cercocebus_atys
ENSCGRG00000000490	-	100	100.000	ENSCLAG00000008691	SNRPD1	100	100.000	Chinchilla_lanigera
ENSCGRG00000000490	-	100	100.000	ENSCSAG00000017654	SNRPD1	100	100.000	Chlorocebus_sabaeus
ENSCGRG00000000490	-	100	100.000	ENSCPBG00000023143	SNRPD1	100	100.000	Chrysemys_picta_bellii
ENSCGRG00000000490	-	72	87.209	ENSCING00000024100	-	69	87.209	Ciona_intestinalis
ENSCGRG00000000490	-	73	85.057	ENSCSAVG00000004578	-	70	85.057	Ciona_savignyi
ENSCGRG00000000490	-	100	100.000	ENSCGRG00001021055	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000000490	-	81	75.000	ENSCGRG00001009945	-	85	75.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000000490	-	80	94.737	ENSCSEG00000018141	snrpd1	81	94.792	Cynoglossus_semilaevis
ENSCGRG00000000490	-	100	96.639	ENSCVAG00000000534	snrpd1	100	96.639	Cyprinodon_variegatus
ENSCGRG00000000490	-	100	97.479	ENSDARG00000011648	snrpd1	100	97.479	Danio_rerio
ENSCGRG00000000490	-	100	100.000	ENSDNOG00000040310	SNRPD1	100	100.000	Dasypus_novemcinctus
ENSCGRG00000000490	-	100	100.000	ENSDORG00000008349	Snrpd1	100	100.000	Dipodomys_ordii
ENSCGRG00000000490	-	79	82.979	FBgn0261933	SmD1	76	82.979	Drosophila_melanogaster
ENSCGRG00000000490	-	74	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSCGRG00000000490	-	94	92.857	ENSEBUG00000003170	snrpd1	94	92.857	Eptatretus_burgeri
ENSCGRG00000000490	-	94	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSCGRG00000000490	-	94	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSCGRG00000000490	-	75	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSCGRG00000000490	-	93	85.586	ENSELUG00000000088	snrpd1	79	95.745	Esox_lucius
ENSCGRG00000000490	-	100	100.000	ENSFCAG00000012352	SNRPD1	100	100.000	Felis_catus
ENSCGRG00000000490	-	94	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSCGRG00000000490	-	100	97.479	ENSGMOG00000015607	snrpd1	100	97.479	Gadus_morhua
ENSCGRG00000000490	-	100	100.000	ENSGALG00000041334	SNRPD1	100	100.000	Gallus_gallus
ENSCGRG00000000490	-	100	96.639	ENSGAFG00000011171	snrpd1	100	96.639	Gambusia_affinis
ENSCGRG00000000490	-	100	97.479	ENSGACG00000005201	SNRPD1	100	97.479	Gasterosteus_aculeatus
ENSCGRG00000000490	-	100	100.000	ENSGAGG00000011197	SNRPD1	100	100.000	Gopherus_agassizii
ENSCGRG00000000490	-	100	100.000	ENSGGOG00000041053	SNRPD1	100	100.000	Gorilla_gorilla
ENSCGRG00000000490	-	81	94.792	ENSGGOG00000026706	-	80	94.792	Gorilla_gorilla
ENSCGRG00000000490	-	100	96.639	ENSHBUG00000003236	snrpd1	100	96.639	Haplochromis_burtoni
ENSCGRG00000000490	-	100	100.000	ENSHGLG00000007152	SNRPD1	100	100.000	Heterocephalus_glaber_female
ENSCGRG00000000490	-	100	100.000	ENSHGLG00100008618	SNRPD1	100	100.000	Heterocephalus_glaber_male
ENSCGRG00000000490	-	100	96.639	ENSIPUG00000003576	snrpd1	100	96.639	Ictalurus_punctatus
ENSCGRG00000000490	-	100	100.000	ENSSTOG00000000485	SNRPD1	100	100.000	Ictidomys_tridecemlineatus
ENSCGRG00000000490	-	100	100.000	ENSJJAG00000017698	Snrpd1	100	100.000	Jaculus_jaculus
ENSCGRG00000000490	-	100	96.639	ENSKMAG00000005987	snrpd1	100	96.639	Kryptolebias_marmoratus
ENSCGRG00000000490	-	100	96.639	ENSLBEG00000003327	snrpd1	100	96.639	Labrus_bergylta
ENSCGRG00000000490	-	100	100.000	ENSLACG00000001955	SNRPD1	100	100.000	Latimeria_chalumnae
ENSCGRG00000000490	-	98	97.436	ENSLOCG00000002003	snrpd1	100	97.436	Lepisosteus_oculatus
ENSCGRG00000000490	-	99	98.305	ENSLAFG00000005819	SNRPD1	100	98.305	Loxodonta_africana
ENSCGRG00000000490	-	100	100.000	ENSMFAG00000042080	SNRPD1	100	100.000	Macaca_fascicularis
ENSCGRG00000000490	-	96	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSCGRG00000000490	-	100	100.000	ENSMNEG00000041296	SNRPD1	100	100.000	Macaca_nemestrina
ENSCGRG00000000490	-	100	100.000	ENSMLEG00000028659	SNRPD1	100	100.000	Mandrillus_leucophaeus
ENSCGRG00000000490	-	100	96.639	ENSMAMG00000012971	snrpd1	100	96.639	Mastacembelus_armatus
ENSCGRG00000000490	-	100	96.639	ENSMZEG00005004685	snrpd1	100	96.639	Maylandia_zebra
ENSCGRG00000000490	-	97	100.000	ENSMGAG00000011598	SNRPD1	98	97.479	Meleagris_gallopavo
ENSCGRG00000000490	-	82	95.050	ENSMAUG00000006829	-	65	95.050	Mesocricetus_auratus
ENSCGRG00000000490	-	81	83.333	ENSMAUG00000016467	-	86	83.333	Mesocricetus_auratus
ENSCGRG00000000490	-	81	83.333	ENSMAUG00000016502	-	86	83.333	Mesocricetus_auratus
ENSCGRG00000000490	-	100	100.000	ENSMICG00000044066	SNRPD1	100	100.000	Microcebus_murinus
ENSCGRG00000000490	-	100	100.000	ENSMOCG00000017367	Snrpd1	100	100.000	Microtus_ochrogaster
ENSCGRG00000000490	-	100	96.639	ENSMMOG00000019089	snrpd1	100	96.639	Mola_mola
ENSCGRG00000000490	-	100	100.000	ENSMODG00000021487	SNRPD1	100	100.000	Monodelphis_domestica
ENSCGRG00000000490	-	100	96.639	ENSMALG00000014459	snrpd1	100	96.639	Monopterus_albus
ENSCGRG00000000490	-	100	100.000	MGP_CAROLIEiJ_G0021994	Snrpd1	100	100.000	Mus_caroli
ENSCGRG00000000490	-	100	100.000	ENSMUSG00000002477	Snrpd1	100	100.000	Mus_musculus
ENSCGRG00000000490	-	100	100.000	MGP_PahariEiJ_G0018731	Snrpd1	100	100.000	Mus_pahari
ENSCGRG00000000490	-	100	100.000	MGP_SPRETEiJ_G0022910	Snrpd1	100	100.000	Mus_spretus
ENSCGRG00000000490	-	100	99.160	ENSMPUG00000020041	-	100	99.160	Mustela_putorius_furo
ENSCGRG00000000490	-	98	98.291	ENSMPUG00000005567	-	100	100.000	Mustela_putorius_furo
ENSCGRG00000000490	-	97	97.414	ENSMLUG00000009124	SNRPD1	91	96.581	Myotis_lucifugus
ENSCGRG00000000490	-	100	100.000	ENSNGAG00000023946	Snrpd1	100	100.000	Nannospalax_galili
ENSCGRG00000000490	-	79	95.745	ENSNBRG00000012119	snrpd1	78	95.745	Neolamprologus_brichardi
ENSCGRG00000000490	-	100	97.479	ENSNLEG00000031430	SNRPD1	100	97.479	Nomascus_leucogenys
ENSCGRG00000000490	-	100	100.000	ENSODEG00000005764	SNRPD1	100	100.000	Octodon_degus
ENSCGRG00000000490	-	100	96.639	ENSONIG00000002486	snrpd1	100	96.639	Oreochromis_niloticus
ENSCGRG00000000490	-	82	88.776	ENSOANG00000004638	-	82	88.776	Ornithorhynchus_anatinus
ENSCGRG00000000490	-	98	98.291	ENSOCUG00000023761	-	100	100.000	Oryctolagus_cuniculus
ENSCGRG00000000490	-	100	99.160	ENSOCUG00000014399	-	100	99.160	Oryctolagus_cuniculus
ENSCGRG00000000490	-	94	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSCGRG00000000490	-	100	96.639	ENSORLG00020005743	snrpd1	100	96.639	Oryzias_latipes_hni
ENSCGRG00000000490	-	100	96.639	ENSORLG00015013402	snrpd1	100	96.639	Oryzias_latipes_hsok
ENSCGRG00000000490	-	100	96.639	ENSOMEG00000011571	snrpd1	100	96.639	Oryzias_melastigma
ENSCGRG00000000490	-	100	96.639	ENSOGAG00000007833	SNRPD1	98	99.145	Otolemur_garnettii
ENSCGRG00000000490	-	100	94.958	ENSOARG00000003413	-	85	94.958	Ovis_aries
ENSCGRG00000000490	-	100	100.000	ENSPPAG00000042593	SNRPD1	100	100.000	Pan_paniscus
ENSCGRG00000000490	-	100	100.000	ENSPPRG00000002399	SNRPD1	100	100.000	Panthera_pardus
ENSCGRG00000000490	-	94	72.321	ENSPPRG00000005009	-	92	72.321	Panthera_pardus
ENSCGRG00000000490	-	96	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSCGRG00000000490	-	100	100.000	ENSPTRG00000009909	SNRPD1	100	100.000	Pan_troglodytes
ENSCGRG00000000490	-	86	94.118	ENSPTRG00000050159	-	87	94.118	Pan_troglodytes
ENSCGRG00000000490	-	100	100.000	ENSPANG00000023478	SNRPD1	100	100.000	Papio_anubis
ENSCGRG00000000490	-	100	97.479	ENSPKIG00000003985	SNRPD1	100	97.479	Paramormyrops_kingsleyae
ENSCGRG00000000490	-	88	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSCGRG00000000490	-	100	96.639	ENSPMGG00000001862	snrpd1	100	96.639	Periophthalmus_magnuspinnatus
ENSCGRG00000000490	-	100	100.000	ENSPEMG00000014773	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCGRG00000000490	-	86	82.692	ENSPMAG00000003938	-	85	82.692	Petromyzon_marinus
ENSCGRG00000000490	-	100	100.000	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSCGRG00000000490	-	81	95.833	ENSPFOG00000012448	SNRPD1	85	95.833	Poecilia_formosa
ENSCGRG00000000490	-	81	95.833	ENSPLAG00000006738	snrpd1	85	95.833	Poecilia_latipinna
ENSCGRG00000000490	-	81	95.833	ENSPMEG00000021942	snrpd1	85	95.833	Poecilia_mexicana
ENSCGRG00000000490	-	100	96.639	ENSPREG00000007094	snrpd1	100	96.639	Poecilia_reticulata
ENSCGRG00000000490	-	100	100.000	ENSPPYG00000025874	SNRPD1	100	100.000	Pongo_abelii
ENSCGRG00000000490	-	100	100.000	ENSPCOG00000013327	SNRPD1	100	100.000	Propithecus_coquereli
ENSCGRG00000000490	-	100	100.000	ENSPVAG00000005511	SNRPD1	80	100.000	Pteropus_vampyrus
ENSCGRG00000000490	-	100	96.639	ENSPNAG00000017824	snrpd1	100	96.639	Pygocentrus_nattereri
ENSCGRG00000000490	-	100	100.000	ENSRNOG00000013714	Snrpd1	100	100.000	Rattus_norvegicus
ENSCGRG00000000490	-	100	100.000	ENSRBIG00000022996	SNRPD1	100	100.000	Rhinopithecus_bieti
ENSCGRG00000000490	-	100	100.000	ENSRROG00000027640	SNRPD1	100	100.000	Rhinopithecus_roxellana
ENSCGRG00000000490	-	100	100.000	ENSSBOG00000020998	SNRPD1	100	100.000	Saimiri_boliviensis_boliviensis
ENSCGRG00000000490	-	100	100.000	ENSSHAG00000011791	SNRPD1	100	100.000	Sarcophilus_harrisii
ENSCGRG00000000490	-	94	95.536	ENSSFOG00015022253	-	94	95.536	Scleropages_formosus
ENSCGRG00000000490	-	94	95.536	ENSSFOG00015008809	-	94	95.536	Scleropages_formosus
ENSCGRG00000000490	-	94	95.536	ENSSMAG00000008765	snrpd1	94	95.536	Scophthalmus_maximus
ENSCGRG00000000490	-	91	95.370	ENSSDUG00000010521	snrpd1	92	95.370	Seriola_dumerili
ENSCGRG00000000490	-	100	96.639	ENSSLDG00000011858	snrpd1	100	96.639	Seriola_lalandi_dorsalis
ENSCGRG00000000490	-	56	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSCGRG00000000490	-	100	100.000	ENSSPUG00000002824	SNRPD1	100	100.000	Sphenodon_punctatus
ENSCGRG00000000490	-	94	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSCGRG00000000490	-	100	100.000	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSCGRG00000000490	-	97	100.000	ENSTGUG00000005095	SNRPD1	100	98.319	Taeniopygia_guttata
ENSCGRG00000000490	-	94	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSCGRG00000000490	-	81	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSCGRG00000000490	-	74	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSCGRG00000000490	-	97	100.000	ENSTTRG00000002654	SNRPD1	100	100.000	Tursiops_truncatus
ENSCGRG00000000490	-	96	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSCGRG00000000490	-	100	100.000	ENSUMAG00000019740	SNRPD1	100	100.000	Ursus_maritimus
ENSCGRG00000000490	-	100	100.000	ENSVPAG00000010056	SNRPD1	80	100.000	Vicugna_pacos
ENSCGRG00000000490	-	94	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSCGRG00000000490	-	100	98.319	ENSXETG00000027354	snrpd1	100	98.319	Xenopus_tropicalis
ENSCGRG00000000490	-	100	96.639	ENSXCOG00000020108	snrpd1	100	96.639	Xiphophorus_couchianus
ENSCGRG00000000490	-	100	96.639	ENSXMAG00000003368	snrpd1	100	96.639	Xiphophorus_maculatus