EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000000778 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 3754 bases
Position: chrJH001909.1:154726-158479
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	1	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	2	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	3	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	4	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	5	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	6	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	7	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	8	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	9	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	10	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	11	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	12	13
ENSCGRP00000000991	zf-C2H2	PF00096.26	1.4e-73	13	13
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	1	9
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	2	9
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	3	9
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	4	9
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	5	9
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	6	9
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	7	9
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	8	9
ENSCGRP00000000989	zf-C2H2	PF00096.26	4.6e-50	9	9
ENSCGRP00000000990	zf-C2H2	PF00096.26	2.7e-27	1	5
ENSCGRP00000000990	zf-C2H2	PF00096.26	2.7e-27	2	5
ENSCGRP00000000990	zf-C2H2	PF00096.26	2.7e-27	3	5
ENSCGRP00000000990	zf-C2H2	PF00096.26	2.7e-27	4	5
ENSCGRP00000000990	zf-C2H2	PF00096.26	2.7e-27	5	5
ENSCGRP00000000991	zf-met	PF12874.7	4.7e-14	1	2
ENSCGRP00000000991	zf-met	PF12874.7	4.7e-14	2	2
ENSCGRP00000000990	zf-met	PF12874.7	1.2e-05	1	2
ENSCGRP00000000990	zf-met	PF12874.7	1.2e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000001032	-	1470	-	ENSCGRP00000000989	490 (aa)	-	-
ENSCGRT00000001033	-	1191	-	ENSCGRP00000000990	397 (aa)	-	-
ENSCGRT00000001034	-	1743	-	ENSCGRP00000000991	581 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000000778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000000778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000000778	-	80	48.375	ENSCGRG00000006987	Zfp768	51	52.448
ENSCGRG00000000778	-	90	34.541	ENSCGRG00000015472	Repin1	84	36.975
ENSCGRG00000000778	-	98	54.545	ENSCGRG00000013626	Zfp715	67	57.500
ENSCGRG00000000778	-	99	53.881	ENSCGRG00000016788	-	99	53.881
ENSCGRG00000000778	-	90	46.667	ENSCGRG00000009462	Zfp236	81	43.089
ENSCGRG00000000778	-	99	43.885	ENSCGRG00000009095	Zfp202	63	43.885
ENSCGRG00000000778	-	99	46.588	ENSCGRG00000002730	Zfp39	92	49.856
ENSCGRG00000000778	-	99	51.289	ENSCGRG00000018332	Zfp53	93	53.409
ENSCGRG00000000778	-	99	33.429	ENSCGRG00000010996	-	88	33.429
ENSCGRG00000000778	-	80	42.500	ENSCGRG00000013485	-	100	42.500
ENSCGRG00000000778	-	78	37.273	ENSCGRG00000012119	Snai2	59	35.294
ENSCGRG00000000778	-	80	37.342	ENSCGRG00000014850	-	96	37.342
ENSCGRG00000000778	-	75	53.191	ENSCGRG00000000462	Sall4	55	44.068
ENSCGRG00000000778	-	72	39.024	ENSCGRG00000009080	Snai1	62	39.024
ENSCGRG00000000778	-	76	48.980	ENSCGRG00000009496	Sall1	57	48.936
ENSCGRG00000000778	-	99	47.634	ENSCGRG00000004206	-	99	49.026
ENSCGRG00000000778	-	80	42.778	ENSCGRG00000012333	Zfp574	83	38.249
ENSCGRG00000000778	-	76	38.462	ENSCGRG00000004814	Patz1	58	30.233
ENSCGRG00000000778	-	97	51.220	ENSCGRG00000001582	Zkscan3	58	51.220
ENSCGRG00000000778	-	99	44.652	ENSCGRG00000012088	Zfp560	90	44.652
ENSCGRG00000000778	-	70	40.698	ENSCGRG00000001380	Scrt2	63	40.698
ENSCGRG00000000778	-	91	47.315	ENSCGRG00000016421	-	79	47.315
ENSCGRG00000000778	-	99	48.895	ENSCGRG00000014813	Zfp454	97	50.565
ENSCGRG00000000778	-	81	50.424	ENSCGRG00000015809	-	97	50.424
ENSCGRG00000000778	-	81	47.887	ENSCGRG00000015629	-	67	48.361
ENSCGRG00000000778	-	87	42.700	ENSCGRG00000015327	Zfp112	68	48.106
ENSCGRG00000000778	-	79	43.636	ENSCGRG00000016739	Zfp423	99	43.636
ENSCGRG00000000778	-	96	42.735	ENSCGRG00000008703	Wt1	74	42.735
ENSCGRG00000000778	-	97	49.597	ENSCGRG00000015037	Zfp354a	97	49.597
ENSCGRG00000000778	-	98	49.515	ENSCGRG00000008411	Gm3854	99	49.515
ENSCGRG00000000778	-	90	49.528	ENSCGRG00000008531	-	90	51.293
ENSCGRG00000000778	-	97	46.947	ENSCGRG00000013919	Zfp709	98	46.947
ENSCGRG00000000778	-	77	36.296	ENSCGRG00000014932	Snai3	64	36.296
ENSCGRG00000000778	-	93	34.188	ENSCGRG00000015951	Zfp131	59	34.188
ENSCGRG00000000778	-	89	37.004	ENSCGRG00000017618	Zfp408	51	37.688
ENSCGRG00000000778	-	79	50.370	ENSCGRG00000008325	Bcl6b	53	40.845
ENSCGRG00000000778	-	87	46.930	ENSCGRG00000000280	-	90	46.930
ENSCGRG00000000778	-	67	49.206	ENSCGRG00000003120	Zfp367	53	44.737
ENSCGRG00000000778	-	96	57.576	ENSCGRG00000000632	-	98	57.576
ENSCGRG00000000778	-	83	49.258	ENSCGRG00000017528	Zfp94	79	49.211
ENSCGRG00000000778	-	99	50.000	ENSCGRG00000009742	-	94	48.519
ENSCGRG00000000778	-	99	32.251	ENSCGRG00000014598	Zfp319	88	42.500
ENSCGRG00000000778	-	98	46.934	ENSCGRG00000008922	2610008E11Rik	95	47.009
ENSCGRG00000000778	-	97	46.930	ENSCGRG00000010436	-	96	45.896
ENSCGRG00000000778	-	97	64.135	ENSCGRG00000000411	-	97	60.563

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000000778	-	81	54.040	ENSCING00000018801	zf(c2h2)-138	90	54.494	Ciona_intestinalis
ENSCGRG00000000778	-	86	54.506	ENSCING00000003470	-	94	54.579	Ciona_intestinalis
ENSCGRG00000000778	-	80	50.357	ENSCSAVG00000010156	-	92	51.376	Ciona_savignyi
ENSCGRG00000000778	-	100	100.000	ENSCGRG00001007163	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000000778	-	85	51.894	ENSCGRG00001013602	-	98	51.894	Cricetulus_griseus_chok1gshd
ENSCGRG00000000778	-	93	50.000	ENSCGRG00001002297	-	100	50.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000000778	-	90	50.376	ENSEBUG00000016878	-	86	50.376	Eptatretus_burgeri
ENSCGRG00000000778	-	90	43.584	ENSEBUG00000001525	-	86	47.347	Eptatretus_burgeri
ENSCGRG00000000778	-	80	50.253	ENSEBUG00000012823	-	79	50.253	Eptatretus_burgeri
ENSCGRG00000000778	-	94	44.444	ENSEBUG00000008792	-	99	42.286	Eptatretus_burgeri
ENSCGRG00000000778	-	91	41.266	ENSEBUG00000012454	-	93	43.071	Eptatretus_burgeri
ENSCGRG00000000778	-	92	48.246	ENSEBUG00000005655	-	87	48.246	Eptatretus_burgeri
ENSCGRG00000000778	-	99	51.399	ENSMAUG00000004844	-	97	51.399	Mesocricetus_auratus
ENSCGRG00000000778	-	96	59.470	ENSMAUG00000000939	-	95	59.470	Mesocricetus_auratus
ENSCGRG00000000778	-	96	56.757	ENSMAUG00000005974	-	98	56.757	Mesocricetus_auratus
ENSCGRG00000000778	-	97	53.788	ENSMOCG00000006946	Zfp53	97	52.128	Microtus_ochrogaster
ENSCGRG00000000778	-	97	57.655	ENSMOCG00000007851	-	99	57.655	Microtus_ochrogaster
ENSCGRG00000000778	-	97	54.327	MGP_CAROLIEiJ_G0021132	Zfp948	96	54.327	Mus_caroli
ENSCGRG00000000778	-	96	55.936	ENSMUSG00000062743	Zfp677	98	54.422	Mus_musculus
ENSCGRG00000000778	-	81	49.580	ENSPSIG00000009270	-	79	47.236	Pelodiscus_sinensis
ENSCGRG00000000778	-	97	59.160	ENSPEMG00000007241	-	98	59.160	Peromyscus_maniculatus_bairdii
ENSCGRG00000000778	-	96	61.004	ENSPEMG00000023883	-	98	61.004	Peromyscus_maniculatus_bairdii
ENSCGRG00000000778	-	99	52.130	ENSRNOG00000052406	LOC102552527	97	55.835	Rattus_norvegicus