EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000001380 (Gene tree)
Gene ID: -
Gene Symbol: Scrt2
Alias: -
Full Name: scratch family zinc finger 2
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 11396 bases
Position: chrJH001553.1:201694-213089
Accession: 2139287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000001852	zf-C2H2	PF00096.26	9.8e-20	1	2
ENSCGRP00000001852	zf-C2H2	PF00096.26	9.8e-20	2	2
ENSCGRP00000001852	zf-met	PF12874.7	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000001900	-	519	-	ENSCGRP00000001852	173 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000001380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000001380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000001380	Scrt2	63	47.917	ENSCGRG00000008531	-	86	47.917
ENSCGRG00000001380	Scrt2	59	38.000	ENSCGRG00000014850	-	50	38.000
ENSCGRG00000001380	Scrt2	63	45.763	ENSCGRG00000012088	Zfp560	59	45.763
ENSCGRG00000001380	Scrt2	63	41.860	ENSCGRG00000015037	Zfp354a	74	41.860
ENSCGRG00000001380	Scrt2	68	43.023	ENSCGRG00000008411	Gm3854	64	43.023
ENSCGRG00000001380	Scrt2	64	45.000	ENSCGRG00000017528	Zfp94	68	45.000
ENSCGRG00000001380	Scrt2	66	42.353	ENSCGRG00000016421	-	72	42.353
ENSCGRG00000001380	Scrt2	62	50.847	ENSCGRG00000009742	-	70	50.847
ENSCGRG00000001380	Scrt2	63	39.252	ENSCGRG00000013485	-	98	39.252
ENSCGRG00000001380	Scrt2	63	39.535	ENSCGRG00000000411	-	72	39.535
ENSCGRG00000001380	Scrt2	63	41.379	ENSCGRG00000000632	-	77	38.318
ENSCGRG00000001380	Scrt2	63	43.529	ENSCGRG00000016788	-	54	43.529
ENSCGRG00000001380	Scrt2	63	40.698	ENSCGRG00000000778	-	70	40.698
ENSCGRG00000001380	Scrt2	63	45.098	ENSCGRG00000013919	Zfp709	66	45.098
ENSCGRG00000001380	Scrt2	63	38.372	ENSCGRG00000014598	Zfp319	62	38.372
ENSCGRG00000001380	Scrt2	66	38.095	ENSCGRG00000008922	2610008E11Rik	63	38.095
ENSCGRG00000001380	Scrt2	66	45.349	ENSCGRG00000014813	Zfp454	71	45.349
ENSCGRG00000001380	Scrt2	63	41.860	ENSCGRG00000018332	Zfp53	62	41.860
ENSCGRG00000001380	Scrt2	63	44.706	ENSCGRG00000010436	-	68	44.706
ENSCGRG00000001380	Scrt2	65	46.512	ENSCGRG00000004206	-	89	46.512
ENSCGRG00000001380	Scrt2	63	41.860	ENSCGRG00000015629	-	56	41.860
ENSCGRG00000001380	Scrt2	63	46.341	ENSCGRG00000013626	Zfp715	57	46.341
ENSCGRG00000001380	Scrt2	63	42.202	ENSCGRG00000000280	-	81	42.202

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000001380	Scrt2	100	88.991	ENSAPOG00000015197	-	88	88.991	Acanthochromis_polyacanthus
ENSCGRG00000001380	Scrt2	98	89.908	ENSAPOG00000003680	scrt2	87	53.975	Acanthochromis_polyacanthus
ENSCGRG00000001380	Scrt2	100	51.626	ENSACIG00000013613	scrt1b	88	51.626	Amphilophus_citrinellus
ENSCGRG00000001380	Scrt2	98	89.908	ENSAOCG00000021557	scrt2	87	53.975	Amphiprion_ocellaris
ENSCGRG00000001380	Scrt2	100	51.220	ENSAOCG00000003910	scrt1b	88	51.220	Amphiprion_ocellaris
ENSCGRG00000001380	Scrt2	98	89.908	ENSAPEG00000022558	scrt2	87	53.975	Amphiprion_percula
ENSCGRG00000001380	Scrt2	63	89.908	ENSATEG00000002302	scrt1b	88	50.407	Anabas_testudineus
ENSCGRG00000001380	Scrt2	63	91.743	ENSACAG00000016109	SCRT2	50	91.743	Anolis_carolinensis
ENSCGRG00000001380	Scrt2	100	51.626	ENSACLG00000007162	scrt1b	88	51.626	Astatotilapia_calliptera
ENSCGRG00000001380	Scrt2	63	89.908	ENSCSEG00000008596	scrt1b	88	51.220	Cynoglossus_semilaevis
ENSCGRG00000001380	Scrt2	100	49.393	ENSDARG00000040214	scrt1b	88	49.393	Danio_rerio
ENSCGRG00000001380	Scrt2	100	49.796	ENSDARG00000100821	scrt1a	88	49.796	Danio_rerio
ENSCGRG00000001380	Scrt2	63	90.826	ENSELUG00000023883	scrt2	56	90.826	Esox_lucius
ENSCGRG00000001380	Scrt2	100	48.571	ENSELUG00000022228	scrt1a	88	48.571	Esox_lucius
ENSCGRG00000001380	Scrt2	100	49.388	ENSELUG00000005435	scrt1b	88	49.388	Esox_lucius
ENSCGRG00000001380	Scrt2	100	63.682	ENSFDAG00000008733	SCRT1	86	63.682	Fukomys_damarensis
ENSCGRG00000001380	Scrt2	100	51.626	ENSHBUG00000016621	scrt1b	88	51.626	Haplochromis_burtoni
ENSCGRG00000001380	Scrt2	100	50.813	ENSHCOG00000016704	scrt1b	88	50.813	Hippocampus_comes
ENSCGRG00000001380	Scrt2	100	54.310	ENSIPUG00000005547	-	88	54.310	Ictalurus_punctatus
ENSCGRG00000001380	Scrt2	100	48.996	ENSIPUG00000004551	scrt1a	88	48.996	Ictalurus_punctatus
ENSCGRG00000001380	Scrt2	74	83.333	ENSSTOG00000032944	SCRT2	80	83.333	Ictidomys_tridecemlineatus
ENSCGRG00000001380	Scrt2	100	67.630	ENSMFAG00000035496	SCRT1	80	67.033	Macaca_fascicularis
ENSCGRG00000001380	Scrt2	63	89.908	ENSMAMG00000011698	scrt1b	88	50.407	Mastacembelus_armatus
ENSCGRG00000001380	Scrt2	98	90.826	ENSMAMG00000001291	scrt2	56	90.826	Mastacembelus_armatus
ENSCGRG00000001380	Scrt2	100	51.626	ENSMZEG00005005627	scrt1b	88	51.626	Maylandia_zebra
ENSCGRG00000001380	Scrt2	100	50.407	ENSMMOG00000003327	scrt1b	88	50.407	Mola_mola
ENSCGRG00000001380	Scrt2	63	89.908	ENSMALG00000012704	scrt1b	88	50.407	Monopterus_albus
ENSCGRG00000001380	Scrt2	100	87.429	ENSNGAG00000020815	Scrt2	83	87.429	Nannospalax_galili
ENSCGRG00000001380	Scrt2	100	51.626	ENSNBRG00000013983	scrt1b	88	51.626	Neolamprologus_brichardi
ENSCGRG00000001380	Scrt2	63	89.908	ENSONIG00000006007	scrt1b	88	51.626	Oreochromis_niloticus
ENSCGRG00000001380	Scrt2	98	90.826	ENSOMEG00000002661	scrt2	56	90.826	Oryzias_melastigma
ENSCGRG00000001380	Scrt2	100	48.988	ENSPKIG00000020085	scrt1a	88	48.988	Paramormyrops_kingsleyae
ENSCGRG00000001380	Scrt2	90	65.455	ENSPLAG00000005765	scrt2	57	65.455	Poecilia_latipinna
ENSCGRG00000001380	Scrt2	90	65.455	ENSPMEG00000001538	scrt2	57	65.455	Poecilia_mexicana
ENSCGRG00000001380	Scrt2	100	51.626	ENSPNYG00000017733	scrt1b	88	51.626	Pundamilia_nyererei
ENSCGRG00000001380	Scrt2	100	49.798	ENSPNAG00000017415	scrt1a	88	49.798	Pygocentrus_nattereri
ENSCGRG00000001380	Scrt2	63	91.743	ENSPNAG00000027880	-	89	50.813	Pygocentrus_nattereri
ENSCGRG00000001380	Scrt2	100	50.813	ENSSMAG00000019207	scrt1b	88	50.813	Scophthalmus_maximus
ENSCGRG00000001380	Scrt2	100	51.220	ENSSDUG00000007752	scrt1b	88	51.220	Seriola_dumerili
ENSCGRG00000001380	Scrt2	100	51.220	ENSSLDG00000017166	scrt1b	88	51.220	Seriola_lalandi_dorsalis
ENSCGRG00000001380	Scrt2	100	51.220	ENSSPAG00000002200	scrt1b	88	51.220	Stegastes_partitus
ENSCGRG00000001380	Scrt2	100	50.407	ENSTRUG00000011637	scrt1b	89	50.407	Takifugu_rubripes
ENSCGRG00000001380	Scrt2	100	89.908	ENSTNIG00000012473	scrt2	88	89.908	Tetraodon_nigroviridis
ENSCGRG00000001380	Scrt2	100	88.991	ENSXMAG00000015353	-	89	88.991	Xiphophorus_maculatus