EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000001417 (Gene tree)
Gene ID: -
Gene Symbol: Smarca5
Alias: 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 37384 bases
Position: chrJH000646.1:868090-905473
Accession: 100754132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000001901	ResIII	PF04851.15	6.5e-11	1	1
ENSCGRP00000001902	ResIII	PF04851.15	6.9e-11	1	1
ENSCGRP00000001903	ResIII	PF04851.15	7e-11	1	1
ENSCGRP00000001902	DEAD	PF00270.29	3.5e-06	1	1
ENSCGRP00000001901	DEAD	PF00270.29	3.5e-06	1	1
ENSCGRP00000001903	DEAD	PF00270.29	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000001949	-	5263	XM_007646783	ENSCGRP00000001901	1010 (aa)	XP_007644973	-
ENSCGRT00000001951	-	3069	-	ENSCGRP00000001903	1022 (aa)	-	-
ENSCGRT00000001950	-	3021	-	ENSCGRP00000001902	1006 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000001417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000001417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000001417	Smarca5	55	43.186	ENSCGRG00000007554	Chd1l	64	43.186
ENSCGRG00000001417	Smarca5	60	39.432	ENSCGRG00000012850	Chd9	56	43.838
ENSCGRG00000001417	Smarca5	97	84.340	ENSCGRG00000015301	Smarca1	96	84.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000001417	Smarca5	99	99.396	ENSG00000153147	SMARCA5	95	98.997	Homo_sapiens
ENSCGRG00000001417	Smarca5	99	99.597	ENSAMEG00000009585	SMARCA5	95	99.398	Ailuropoda_melanoleuca
ENSCGRG00000001417	Smarca5	96	96.715	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSCGRG00000001417	Smarca5	99	96.479	ENSACAG00000003038	SMARCA5	97	96.204	Anolis_carolinensis
ENSCGRG00000001417	Smarca5	99	99.295	ENSANAG00000019345	SMARCA5	99	99.296	Aotus_nancymaae
ENSCGRG00000001417	Smarca5	99	99.496	ENSBTAG00000003399	SMARCA5	95	99.298	Bos_taurus
ENSCGRG00000001417	Smarca5	99	99.396	ENSCJAG00000002735	SMARCA5	95	99.297	Callithrix_jacchus
ENSCGRG00000001417	Smarca5	99	99.597	ENSCAFG00000007525	SMARCA5	95	99.398	Canis_familiaris
ENSCGRG00000001417	Smarca5	97	99.486	ENSCAFG00020025641	SMARCA5	94	99.284	Canis_lupus_dingo
ENSCGRG00000001417	Smarca5	99	97.684	ENSCHIG00000016375	-	96	97.492	Capra_hircus
ENSCGRG00000001417	Smarca5	99	99.496	ENSCHIG00000013730	-	95	99.298	Capra_hircus
ENSCGRG00000001417	Smarca5	99	99.496	ENSTSYG00000009954	SMARCA5	99	99.496	Carlito_syrichta
ENSCGRG00000001417	Smarca5	96	99.483	ENSCAPG00000013747	SMARCA5	95	99.483	Cavia_aperea
ENSCGRG00000001417	Smarca5	99	99.698	ENSCPOG00000002259	SMARCA5	95	99.398	Cavia_porcellus
ENSCGRG00000001417	Smarca5	99	99.396	ENSCCAG00000027215	SMARCA5	99	99.396	Cebus_capucinus
ENSCGRG00000001417	Smarca5	99	99.396	ENSCATG00000044917	SMARCA5	95	99.097	Cercocebus_atys
ENSCGRG00000001417	Smarca5	99	99.698	ENSCLAG00000006153	SMARCA5	100	99.799	Chinchilla_lanigera
ENSCGRG00000001417	Smarca5	96	99.484	ENSCSAG00000003448	SMARCA5	100	99.484	Chlorocebus_sabaeus
ENSCGRG00000001417	Smarca5	90	98.519	ENSCHOG00000011724	SMARCA5	86	98.519	Choloepus_hoffmanni
ENSCGRG00000001417	Smarca5	99	98.189	ENSCPBG00000027535	SMARCA5	96	98.189	Chrysemys_picta_bellii
ENSCGRG00000001417	Smarca5	99	99.396	ENSCANG00000041629	SMARCA5	95	99.097	Colobus_angolensis_palliatus
ENSCGRG00000001417	Smarca5	99	99.899	ENSCGRG00001012719	Smarca5	95	99.599	Cricetulus_griseus_chok1gshd
ENSCGRG00000001417	Smarca5	99	96.677	ENSDNOG00000009158	SMARCA5	95	96.389	Dasypus_novemcinctus
ENSCGRG00000001417	Smarca5	94	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSCGRG00000001417	Smarca5	96	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSCGRG00000001417	Smarca5	99	99.597	ENSEASG00005001866	SMARCA5	98	99.636	Equus_asinus_asinus
ENSCGRG00000001417	Smarca5	99	99.597	ENSECAG00000002676	SMARCA5	95	99.398	Equus_caballus
ENSCGRG00000001417	Smarca5	99	95.065	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSCGRG00000001417	Smarca5	96	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSCGRG00000001417	Smarca5	99	99.597	ENSFCAG00000004544	SMARCA5	95	99.398	Felis_catus
ENSCGRG00000001417	Smarca5	96	97.320	ENSFALG00000004987	SMARCA5	100	97.320	Ficedula_albicollis
ENSCGRG00000001417	Smarca5	99	99.698	ENSFDAG00000021016	SMARCA5	100	99.799	Fukomys_damarensis
ENSCGRG00000001417	Smarca5	97	89.355	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSCGRG00000001417	Smarca5	99	97.586	ENSGALG00000009913	SMARCA5	97	96.906	Gallus_gallus
ENSCGRG00000001417	Smarca5	97	90.686	ENSGACG00000017238	SMARCA5	98	88.079	Gasterosteus_aculeatus
ENSCGRG00000001417	Smarca5	99	98.290	ENSGAGG00000019882	SMARCA5	96	98.290	Gopherus_agassizii
ENSCGRG00000001417	Smarca5	99	99.396	ENSGGOG00000012595	SMARCA5	99	99.396	Gorilla_gorilla
ENSCGRG00000001417	Smarca5	99	99.597	ENSHGLG00000000816	-	95	99.498	Heterocephalus_glaber_female
ENSCGRG00000001417	Smarca5	99	89.930	ENSHGLG00000000317	-	96	89.432	Heterocephalus_glaber_female
ENSCGRG00000001417	Smarca5	99	99.597	ENSHGLG00100018421	-	100	99.698	Heterocephalus_glaber_male
ENSCGRG00000001417	Smarca5	99	99.698	ENSSTOG00000010683	SMARCA5	95	99.103	Ictidomys_tridecemlineatus
ENSCGRG00000001417	Smarca5	99	99.597	ENSJJAG00000014965	Smarca5	96	98.903	Jaculus_jaculus
ENSCGRG00000001417	Smarca5	98	95.459	ENSLACG00000007091	SMARCA5	98	95.090	Latimeria_chalumnae
ENSCGRG00000001417	Smarca5	98	92.183	ENSLOCG00000008966	SMARCA5	98	90.755	Lepisosteus_oculatus
ENSCGRG00000001417	Smarca5	99	99.597	ENSLAFG00000007795	SMARCA5	95	99.298	Loxodonta_africana
ENSCGRG00000001417	Smarca5	99	99.396	ENSMFAG00000043649	SMARCA5	95	99.097	Macaca_fascicularis
ENSCGRG00000001417	Smarca5	99	99.396	ENSMMUG00000000829	SMARCA5	97	99.367	Macaca_mulatta
ENSCGRG00000001417	Smarca5	99	99.396	ENSMNEG00000031916	SMARCA5	95	99.097	Macaca_nemestrina
ENSCGRG00000001417	Smarca5	99	99.396	ENSMLEG00000042393	SMARCA5	95	99.097	Mandrillus_leucophaeus
ENSCGRG00000001417	Smarca5	99	97.586	ENSMGAG00000003517	SMARCA5	99	97.586	Meleagris_gallopavo
ENSCGRG00000001417	Smarca5	99	99.204	ENSMAUG00000015902	Smarca5	99	99.204	Mesocricetus_auratus
ENSCGRG00000001417	Smarca5	99	99.396	ENSMICG00000003971	SMARCA5	99	97.898	Microcebus_murinus
ENSCGRG00000001417	Smarca5	99	99.496	ENSMOCG00000016986	-	97	97.933	Microtus_ochrogaster
ENSCGRG00000001417	Smarca5	99	98.993	ENSMODG00000000391	SMARCA5	95	98.993	Monodelphis_domestica
ENSCGRG00000001417	Smarca5	99	99.597	ENSMUSG00000031715	Smarca5	97	98.228	Mus_musculus
ENSCGRG00000001417	Smarca5	99	99.799	MGP_PahariEiJ_G0022862	Smarca5	97	98.425	Mus_pahari
ENSCGRG00000001417	Smarca5	99	99.698	ENSMLUG00000000468	SMARCA5	95	99.498	Myotis_lucifugus
ENSCGRG00000001417	Smarca5	99	99.799	ENSNGAG00000000441	Smarca5	97	98.325	Nannospalax_galili
ENSCGRG00000001417	Smarca5	99	99.396	ENSNLEG00000005383	SMARCA5	95	99.097	Nomascus_leucogenys
ENSCGRG00000001417	Smarca5	96	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSCGRG00000001417	Smarca5	89	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSCGRG00000001417	Smarca5	96	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSCGRG00000001417	Smarca5	96	99.897	ENSOCUG00000013042	SMARCA5	100	99.897	Oryctolagus_cuniculus
ENSCGRG00000001417	Smarca5	99	99.396	ENSOGAG00000009702	SMARCA5	96	98.317	Otolemur_garnettii
ENSCGRG00000001417	Smarca5	99	99.294	ENSOARG00000010589	SMARCA5	95	98.703	Ovis_aries
ENSCGRG00000001417	Smarca5	99	99.295	ENSPPAG00000028523	SMARCA5	99	99.295	Pan_paniscus
ENSCGRG00000001417	Smarca5	99	93.656	ENSPPRG00000004925	SMARCA5	95	94.383	Panthera_pardus
ENSCGRG00000001417	Smarca5	99	99.597	ENSPTIG00000020959	SMARCA5	96	99.398	Panthera_tigris_altaica
ENSCGRG00000001417	Smarca5	99	99.396	ENSPTRG00000016472	SMARCA5	99	99.396	Pan_troglodytes
ENSCGRG00000001417	Smarca5	99	99.396	ENSPANG00000001175	SMARCA5	95	99.097	Papio_anubis
ENSCGRG00000001417	Smarca5	97	90.900	ENSPKIG00000015885	SMARCA5	100	91.134	Paramormyrops_kingsleyae
ENSCGRG00000001417	Smarca5	97	90.676	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSCGRG00000001417	Smarca5	99	96.076	ENSPSIG00000004177	SMARCA5	100	95.888	Pelodiscus_sinensis
ENSCGRG00000001417	Smarca5	96	89.815	ENSPMGG00000012316	SMARCA5	100	89.815	Periophthalmus_magnuspinnatus
ENSCGRG00000001417	Smarca5	99	99.899	ENSPEMG00000008060	Smarca5	100	98.230	Peromyscus_maniculatus_bairdii
ENSCGRG00000001417	Smarca5	98	70.482	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSCGRG00000001417	Smarca5	64	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSCGRG00000001417	Smarca5	99	98.993	ENSPCIG00000003926	SMARCA5	95	98.993	Phascolarctos_cinereus
ENSCGRG00000001417	Smarca5	99	99.396	ENSPPYG00000015091	SMARCA5	95	99.097	Pongo_abelii
ENSCGRG00000001417	Smarca5	83	95.500	ENSPCAG00000014230	SMARCA5	83	95.500	Procavia_capensis
ENSCGRG00000001417	Smarca5	99	96.475	ENSPCOG00000026744	SMARCA5	99	95.976	Propithecus_coquereli
ENSCGRG00000001417	Smarca5	99	99.496	ENSPVAG00000006482	SMARCA5	95	99.496	Pteropus_vampyrus
ENSCGRG00000001417	Smarca5	99	89.569	ENSPNAG00000027824	SMARCA5	97	90.249	Pygocentrus_nattereri
ENSCGRG00000001417	Smarca5	99	99.698	ENSRNOG00000018149	Smarca5	99	99.799	Rattus_norvegicus
ENSCGRG00000001417	Smarca5	99	99.396	ENSRBIG00000044644	SMARCA5	95	98.705	Rhinopithecus_bieti
ENSCGRG00000001417	Smarca5	99	99.396	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSCGRG00000001417	Smarca5	99	99.396	ENSSBOG00000036257	SMARCA5	95	99.297	Saimiri_boliviensis_boliviensis
ENSCGRG00000001417	Smarca5	99	98.993	ENSSHAG00000008464	SMARCA5	100	99.094	Sarcophilus_harrisii
ENSCGRG00000001417	Smarca5	98	90.679	ENSSFOG00015013252	SMARCA5	96	90.679	Scleropages_formosus
ENSCGRG00000001417	Smarca5	99	95.992	ENSSPUG00000007604	SMARCA5	99	96.566	Sphenodon_punctatus
ENSCGRG00000001417	Smarca5	99	99.597	ENSSSCG00000009047	SMARCA5	95	99.398	Sus_scrofa
ENSCGRG00000001417	Smarca5	99	96.781	ENSTGUG00000002408	SMARCA5	99	96.781	Taeniopygia_guttata
ENSCGRG00000001417	Smarca5	97	99.486	ENSUAMG00000023495	SMARCA5	94	98.983	Ursus_americanus
ENSCGRG00000001417	Smarca5	99	99.597	ENSUMAG00000015324	SMARCA5	97	99.398	Ursus_maritimus
ENSCGRG00000001417	Smarca5	99	99.295	ENSVPAG00000008982	SMARCA5	95	99.097	Vicugna_pacos
ENSCGRG00000001417	Smarca5	99	99.597	ENSVVUG00000017473	SMARCA5	95	99.398	Vulpes_vulpes
ENSCGRG00000001417	Smarca5	93	93.823	ENSXETG00000017566	smarca5	94	93.823	Xenopus_tropicalis