EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000001553 (Gene tree)
Gene ID: -
Gene Symbol: Rrp1b
Alias: 2600005C20Rik
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 31185 bases
Position: chrJH001595.1:26934-58118
Accession: 100751493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000002097	Nop52	PF05997.12	2.7e-60	1	1
ENSCGRP00000002096	Nop52	PF05997.12	2.7e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000002149	-	3761	-	ENSCGRP00000002097	723 (aa)	-	-
ENSCGRT00000002148	-	4542	XM_007630205	ENSCGRP00000002096	738 (aa)	XP_007628395	-

Gene Model

Click here to download ENSCGRG00000001553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000001553's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000001553	Rrp1b	97	65.042	ENSG00000160208	RRP1B	94	65.132	Homo_sapiens
ENSCGRG00000001553	Rrp1b	53	67.358	ENSAMEG00000011401	RRP1B	94	55.337	Ailuropoda_melanoleuca
ENSCGRG00000001553	Rrp1b	55	51.351	ENSAOCG00000017894	-	89	52.604	Amphiprion_ocellaris
ENSCGRG00000001553	Rrp1b	97	42.895	ENSAPLG00000004310	RRP1B	100	43.338	Anas_platyrhynchos
ENSCGRG00000001553	Rrp1b	97	62.726	ENSANAG00000034889	RRP1B	94	62.813	Aotus_nancymaae
ENSCGRG00000001553	Rrp1b	97	58.101	ENSBTAG00000017418	RRP1B	94	58.182	Bos_taurus
ENSCGRG00000001553	Rrp1b	97	61.925	ENSCJAG00000017077	RRP1B	94	62.011	Callithrix_jacchus
ENSCGRG00000001553	Rrp1b	97	59.577	ENSCAFG00000010621	RRP1B	99	60.508	Canis_familiaris
ENSCGRG00000001553	Rrp1b	97	58.790	ENSCAFG00020018901	RRP1B	94	59.775	Canis_lupus_dingo
ENSCGRG00000001553	Rrp1b	97	59.860	ENSCHIG00000021519	RRP1B	94	59.944	Capra_hircus
ENSCGRG00000001553	Rrp1b	97	57.703	ENSCPOG00000002396	RRP1B	100	56.691	Cavia_porcellus
ENSCGRG00000001553	Rrp1b	97	63.611	ENSCCAG00000029384	RRP1B	94	63.700	Cebus_capucinus
ENSCGRG00000001553	Rrp1b	97	65.877	ENSCATG00000017423	RRP1B	94	65.969	Cercocebus_atys
ENSCGRG00000001553	Rrp1b	97	58.155	ENSCLAG00000005622	RRP1B	95	58.155	Chinchilla_lanigera
ENSCGRG00000001553	Rrp1b	50	44.236	ENSCLAG00000011639	RRP1	65	48.161	Chinchilla_lanigera
ENSCGRG00000001553	Rrp1b	97	65.460	ENSCSAG00000007961	RRP1B	94	65.551	Chlorocebus_sabaeus
ENSCGRG00000001553	Rrp1b	99	45.872	ENSCPBG00000010310	RRP1B	98	47.755	Chrysemys_picta_bellii
ENSCGRG00000001553	Rrp1b	97	65.320	ENSCANG00000040952	RRP1B	94	65.411	Colobus_angolensis_palliatus
ENSCGRG00000001553	Rrp1b	97	99.858	ENSCGRG00001010889	-	94	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000001553	Rrp1b	97	99.147	ENSCGRG00001023882	-	94	99.288	Cricetulus_griseus_chok1gshd
ENSCGRG00000001553	Rrp1b	56	56.989	ENSCSEG00000020711	-	73	48.739	Cynoglossus_semilaevis
ENSCGRG00000001553	Rrp1b	53	46.954	ENSDNOG00000019880	RRP1	73	50.000	Dasypus_novemcinctus
ENSCGRG00000001553	Rrp1b	97	57.302	ENSDNOG00000032774	RRP1B	94	57.660	Dasypus_novemcinctus
ENSCGRG00000001553	Rrp1b	96	58.368	ENSDORG00000005496	Rrp1b	100	58.650	Dipodomys_ordii
ENSCGRG00000001553	Rrp1b	97	50.349	ENSETEG00000019489	RRP1B	96	50.413	Echinops_telfairi
ENSCGRG00000001553	Rrp1b	97	62.291	ENSEASG00005001687	RRP1B	94	62.378	Equus_asinus_asinus
ENSCGRG00000001553	Rrp1b	97	62.291	ENSECAG00000018018	RRP1B	94	62.378	Equus_caballus
ENSCGRG00000001553	Rrp1b	61	55.556	ENSELUG00000015885	-	83	40.867	Esox_lucius
ENSCGRG00000001553	Rrp1b	97	58.509	ENSFCAG00000010272	RRP1B	94	58.906	Felis_catus
ENSCGRG00000001553	Rrp1b	51	47.043	ENSFCAG00000008434	RRP1	74	49.568	Felis_catus
ENSCGRG00000001553	Rrp1b	95	41.522	ENSFALG00000002024	RRP1B	100	41.656	Ficedula_albicollis
ENSCGRG00000001553	Rrp1b	50	43.989	ENSFDAG00000013728	RRP1	65	47.458	Fukomys_damarensis
ENSCGRG00000001553	Rrp1b	97	59.775	ENSFDAG00000010899	RRP1B	94	60.056	Fukomys_damarensis
ENSCGRG00000001553	Rrp1b	60	52.041	ENSFHEG00000016314	-	50	54.082	Fundulus_heteroclitus
ENSCGRG00000001553	Rrp1b	59	44.954	ENSGMOG00000001953	-	64	44.954	Gadus_morhua
ENSCGRG00000001553	Rrp1b	62	48.092	ENSGACG00000001438	rrp1	61	48.092	Gasterosteus_aculeatus
ENSCGRG00000001553	Rrp1b	99	44.343	ENSGAGG00000000375	RRP1B	97	45.229	Gopherus_agassizii
ENSCGRG00000001553	Rrp1b	97	64.903	ENSGGOG00000012069	RRP1B	94	64.993	Gorilla_gorilla
ENSCGRG00000001553	Rrp1b	97	60.000	ENSHGLG00000004968	RRP1B	95	60.504	Heterocephalus_glaber_female
ENSCGRG00000001553	Rrp1b	87	66.358	ENSHGLG00100002232	RRP1B	99	55.061	Heterocephalus_glaber_male
ENSCGRG00000001553	Rrp1b	65	43.972	ENSHCOG00000018388	-	57	43.972	Hippocampus_comes
ENSCGRG00000001553	Rrp1b	53	48.485	ENSIPUG00000000673	-	61	41.667	Ictalurus_punctatus
ENSCGRG00000001553	Rrp1b	50	45.924	ENSSTOG00000011116	RRP1	66	51.014	Ictidomys_tridecemlineatus
ENSCGRG00000001553	Rrp1b	97	65.867	ENSSTOG00000011790	RRP1B	91	67.465	Ictidomys_tridecemlineatus
ENSCGRG00000001553	Rrp1b	97	62.901	ENSJJAG00000021279	Rrp1b	94	63.547	Jaculus_jaculus
ENSCGRG00000001553	Rrp1b	97	37.893	ENSLACG00000017332	-	95	38.762	Latimeria_chalumnae
ENSCGRG00000001553	Rrp1b	91	56.593	ENSLAFG00000000766	RRP1B	99	56.444	Loxodonta_africana
ENSCGRG00000001553	Rrp1b	97	65.599	ENSMFAG00000039152	RRP1B	94	65.690	Macaca_fascicularis
ENSCGRG00000001553	Rrp1b	97	62.813	ENSMMUG00000000104	RRP1B	94	62.901	Macaca_mulatta
ENSCGRG00000001553	Rrp1b	50	48.619	ENSMNEG00000031210	RRP1	64	52.862	Macaca_nemestrina
ENSCGRG00000001553	Rrp1b	97	65.647	ENSMNEG00000034269	RRP1B	94	65.738	Macaca_nemestrina
ENSCGRG00000001553	Rrp1b	99	65.569	ENSMLEG00000040044	RRP1B	99	66.156	Mandrillus_leucophaeus
ENSCGRG00000001553	Rrp1b	97	86.202	ENSMAUG00000021508	Rrp1b	94	86.325	Mesocricetus_auratus
ENSCGRG00000001553	Rrp1b	97	63.598	ENSMICG00000004686	RRP1B	94	63.687	Microcebus_murinus
ENSCGRG00000001553	Rrp1b	50	48.641	ENSMICG00000004700	RRP1	80	49.441	Microcebus_murinus
ENSCGRG00000001553	Rrp1b	97	78.409	ENSMOCG00000001117	Rrp1b	94	78.521	Microtus_ochrogaster
ENSCGRG00000001553	Rrp1b	97	56.510	ENSMODG00000021033	RRP1B	94	56.588	Monodelphis_domestica
ENSCGRG00000001553	Rrp1b	97	76.102	MGP_CAROLIEiJ_G0021376	Rrp1b	94	76.211	Mus_caroli
ENSCGRG00000001553	Rrp1b	97	75.212	ENSMUSG00000058392	Rrp1b	94	75.461	Mus_musculus
ENSCGRG00000001553	Rrp1b	97	77.809	MGP_PahariEiJ_G0023695	Rrp1b	94	77.920	Mus_pahari
ENSCGRG00000001553	Rrp1b	97	75.212	MGP_SPRETEiJ_G0022290	Rrp1b	94	75.461	Mus_spretus
ENSCGRG00000001553	Rrp1b	86	54.127	ENSMPUG00000009810	RRP1B	99	55.151	Mustela_putorius_furo
ENSCGRG00000001553	Rrp1b	97	61.592	ENSMLUG00000007738	RRP1B	94	61.538	Myotis_lucifugus
ENSCGRG00000001553	Rrp1b	97	70.845	ENSNGAG00000021073	Rrp1b	96	69.263	Nannospalax_galili
ENSCGRG00000001553	Rrp1b	50	48.619	ENSNLEG00000034734	RRP1	64	52.703	Nomascus_leucogenys
ENSCGRG00000001553	Rrp1b	97	63.904	ENSNLEG00000001490	RRP1B	94	63.994	Nomascus_leucogenys
ENSCGRG00000001553	Rrp1b	67	85.526	ENSMEUG00000003226	-	73	85.526	Notamacropus_eugenii
ENSCGRG00000001553	Rrp1b	97	56.723	ENSODEG00000013177	RRP1B	94	56.662	Octodon_degus
ENSCGRG00000001553	Rrp1b	97	46.905	ENSOANG00000006470	RRP1B	94	47.796	Ornithorhynchus_anatinus
ENSCGRG00000001553	Rrp1b	97	53.997	ENSOCUG00000025931	RRP1B	100	53.521	Oryctolagus_cuniculus
ENSCGRG00000001553	Rrp1b	62	45.600	ENSORLG00020007199	-	51	45.736	Oryzias_latipes_hni
ENSCGRG00000001553	Rrp1b	61	45.528	ENSORLG00015004425	-	51	47.656	Oryzias_latipes_hsok
ENSCGRG00000001553	Rrp1b	61	48.000	ENSOMEG00000016910	-	96	34.343	Oryzias_melastigma
ENSCGRG00000001553	Rrp1b	70	68.464	ENSOGAG00000009872	RRP1B	95	60.045	Otolemur_garnettii
ENSCGRG00000001553	Rrp1b	97	58.741	ENSOARG00000011314	RRP1B	100	58.741	Ovis_aries
ENSCGRG00000001553	Rrp1b	50	49.176	ENSPPAG00000029050	RRP1	64	53.716	Pan_paniscus
ENSCGRG00000001553	Rrp1b	99	64.746	ENSPPAG00000035319	RRP1B	99	65.223	Pan_paniscus
ENSCGRG00000001553	Rrp1b	51	46.237	ENSPPRG00000010656	RRP1	65	52.560	Panthera_pardus
ENSCGRG00000001553	Rrp1b	97	57.784	ENSPPRG00000010356	RRP1B	94	58.182	Panthera_pardus
ENSCGRG00000001553	Rrp1b	81	64.752	ENSPTIG00000016894	RRP1B	97	62.624	Panthera_tigris_altaica
ENSCGRG00000001553	Rrp1b	51	42.368	ENSPTIG00000019473	RRP1	79	44.663	Panthera_tigris_altaica
ENSCGRG00000001553	Rrp1b	97	64.903	ENSPTRG00000013958	RRP1B	94	64.993	Pan_troglodytes
ENSCGRG00000001553	Rrp1b	50	48.077	ENSPANG00000015097	RRP1	64	52.862	Papio_anubis
ENSCGRG00000001553	Rrp1b	97	66.017	ENSPANG00000011090	RRP1B	94	66.109	Papio_anubis
ENSCGRG00000001553	Rrp1b	99	45.182	ENSPSIG00000008152	RRP1B	93	46.164	Pelodiscus_sinensis
ENSCGRG00000001553	Rrp1b	97	82.219	ENSPEMG00000022490	Rrp1b	94	82.479	Peromyscus_maniculatus_bairdii
ENSCGRG00000001553	Rrp1b	57	48.157	ENSPCIG00000015523	-	64	59.060	Phascolarctos_cinereus
ENSCGRG00000001553	Rrp1b	97	57.555	ENSPCIG00000015513	RRP1B	94	57.975	Phascolarctos_cinereus
ENSCGRG00000001553	Rrp1b	50	40.970	ENSPFOG00000007424	-	96	34.505	Poecilia_formosa
ENSCGRG00000001553	Rrp1b	64	45.736	ENSPREG00000015673	-	75	45.736	Poecilia_reticulata
ENSCGRG00000001553	Rrp1b	97	65.460	ENSPPYG00000011470	RRP1B	94	65.551	Pongo_abelii
ENSCGRG00000001553	Rrp1b	50	48.901	ENSPPYG00000011474	RRP1	64	53.356	Pongo_abelii
ENSCGRG00000001553	Rrp1b	88	84.211	ENSPCAG00000013723	RRP1B	91	84.211	Procavia_capensis
ENSCGRG00000001553	Rrp1b	97	64.714	ENSPCOG00000017927	RRP1B	94	64.804	Propithecus_coquereli
ENSCGRG00000001553	Rrp1b	97	54.381	ENSPVAG00000001436	RRP1B	94	54.596	Pteropus_vampyrus
ENSCGRG00000001553	Rrp1b	97	78.947	ENSRNOG00000001194	Rrp1b	94	79.060	Rattus_norvegicus
ENSCGRG00000001553	Rrp1b	97	61.421	ENSRBIG00000041689	RRP1B	94	61.506	Rhinopithecus_bieti
ENSCGRG00000001553	Rrp1b	97	65.599	ENSRROG00000031499	RRP1B	94	65.690	Rhinopithecus_roxellana
ENSCGRG00000001553	Rrp1b	99	61.376	ENSSBOG00000034727	RRP1B	99	61.879	Saimiri_boliviensis_boliviensis
ENSCGRG00000001553	Rrp1b	97	57.282	ENSSHAG00000017789	RRP1B	94	57.361	Sarcophilus_harrisii
ENSCGRG00000001553	Rrp1b	61	50.000	ENSSMAG00000016847	-	78	40.244	Scophthalmus_maximus
ENSCGRG00000001553	Rrp1b	64	47.482	ENSSDUG00000000551	-	51	46.939	Seriola_dumerili
ENSCGRG00000001553	Rrp1b	62	47.482	ENSSLDG00000002538	-	51	46.939	Seriola_lalandi_dorsalis
ENSCGRG00000001553	Rrp1b	80	61.837	ENSSARG00000003108	-	80	61.837	Sorex_araneus
ENSCGRG00000001553	Rrp1b	97	42.801	ENSSPUG00000002834	RRP1B	97	42.401	Sphenodon_punctatus
ENSCGRG00000001553	Rrp1b	97	53.997	ENSSSCG00000021698	RRP1B	99	53.997	Sus_scrofa
ENSCGRG00000001553	Rrp1b	97	43.593	ENSTGUG00000005926	RRP1B	100	43.725	Taeniopygia_guttata
ENSCGRG00000001553	Rrp1b	56	45.833	ENSTNIG00000005053	rrp1	63	45.833	Tetraodon_nigroviridis
ENSCGRG00000001553	Rrp1b	82	71.588	ENSTBEG00000000422	RRP1B	100	74.556	Tupaia_belangeri
ENSCGRG00000001553	Rrp1b	97	56.863	ENSTTRG00000000723	RRP1B	94	57.644	Tursiops_truncatus
ENSCGRG00000001553	Rrp1b	97	56.882	ENSUAMG00000026765	RRP1B	94	57.806	Ursus_americanus
ENSCGRG00000001553	Rrp1b	66	74.603	ENSUMAG00000025510	RRP1B	93	74.603	Ursus_maritimus
ENSCGRG00000001553	Rrp1b	97	60.112	ENSVVUG00000024509	RRP1B	99	60.423	Vulpes_vulpes
ENSCGRG00000001553	Rrp1b	59	45.238	ENSXETG00000013683	rrp1b	60	51.020	Xenopus_tropicalis
ENSCGRG00000001553	Rrp1b	61	45.522	ENSXMAG00000023123	-	96	32.953	Xiphophorus_maculatus