EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000002139	zf-C2H2	PF00096.26	3.8e-44	1	7
ENSCGRP00000002139	zf-C2H2	PF00096.26	3.8e-44	2	7
ENSCGRP00000002139	zf-C2H2	PF00096.26	3.8e-44	3	7
ENSCGRP00000002139	zf-C2H2	PF00096.26	3.8e-44	4	7
ENSCGRP00000002139	zf-C2H2	PF00096.26	3.8e-44	5	7
ENSCGRP00000002139	zf-C2H2	PF00096.26	3.8e-44	6	7
ENSCGRP00000002139	zf-C2H2	PF00096.26	3.8e-44	7	7
ENSCGRP00000002139	zf-met	PF12874.7	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000002192	-	3067	XM_007646102	ENSCGRP00000002139	553 (aa)	XP_007620841	G3HPX5

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000001582	Zkscan3	59	48.472	ENSCGRG00000000411	-	99	48.472
ENSCGRG00000001582	Zkscan3	60	45.217	ENSCGRG00000008703	Wt1	67	45.217
ENSCGRG00000001582	Zkscan3	51	41.767	ENSCGRG00000013626	Zfp715	53	41.767
ENSCGRG00000001582	Zkscan3	50	51.073	ENSCGRG00000016421	-	72	49.327
ENSCGRG00000001582	Zkscan3	59	49.138	ENSCGRG00000000632	-	99	54.348
ENSCGRG00000001582	Zkscan3	58	50.633	ENSCGRG00000015629	-	74	48.908
ENSCGRG00000001582	Zkscan3	58	48.031	ENSCGRG00000009742	-	94	38.272
ENSCGRG00000001582	Zkscan3	58	47.826	ENSCGRG00000004206	-	100	47.826
ENSCGRG00000001582	Zkscan3	50	48.295	ENSCGRG00000015037	Zfp354a	73	49.565
ENSCGRG00000001582	Zkscan3	59	54.438	ENSCGRG00000016788	-	99	54.438
ENSCGRG00000001582	Zkscan3	52	50.655	ENSCGRG00000000280	-	88	50.655
ENSCGRG00000001582	Zkscan3	51	48.416	ENSCGRG00000008531	-	89	48.858
ENSCGRG00000001582	Zkscan3	95	36.406	ENSCGRG00000009095	Zfp202	99	36.250
ENSCGRG00000001582	Zkscan3	58	51.220	ENSCGRG00000000778	-	97	51.220
ENSCGRG00000001582	Zkscan3	55	46.479	ENSCGRG00000010996	-	87	46.479
ENSCGRG00000001582	Zkscan3	59	48.031	ENSCGRG00000018332	Zfp53	93	47.845
ENSCGRG00000001582	Zkscan3	59	50.655	ENSCGRG00000010436	-	87	50.655
ENSCGRG00000001582	Zkscan3	61	51.327	ENSCGRG00000008411	Gm3854	68	51.327
ENSCGRG00000001582	Zkscan3	64	52.402	ENSCGRG00000012088	Zfp560	97	52.402
ENSCGRG00000001582	Zkscan3	58	33.108	ENSCGRG00000016739	Zfp423	69	39.535
ENSCGRG00000001582	Zkscan3	52	45.415	ENSCGRG00000002730	Zfp39	62	45.221

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000001582	Zkscan3	100	100.000	ENSCGRG00001006591	Zkscan3	100	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000001582	Zkscan3	99	79.422	ENSJJAG00000004576	-	99	79.422	Jaculus_jaculus
ENSCGRG00000001582	Zkscan3	100	97.107	ENSMAUG00000009785	Zkscan3	100	97.107	Mesocricetus_auratus
ENSCGRG00000001582	Zkscan3	100	96.383	ENSMOCG00000017860	Zkscan3	100	96.383	Microtus_ochrogaster
ENSCGRG00000001582	Zkscan3	97	56.942	MGP_CAROLIEiJ_G0018274	Zkscan4	99	59.227	Mus_caroli
ENSCGRG00000001582	Zkscan3	100	93.852	ENSMUSG00000021327	Zkscan3	100	93.852	Mus_musculus
ENSCGRG00000001582	Zkscan3	97	60.886	ENSMUSG00000054931	Zkscan4	99	60.886	Mus_musculus
ENSCGRG00000001582	Zkscan3	96	60.111	MGP_PahariEiJ_G0019324	Zkscan4	99	63.265	Mus_pahari
ENSCGRG00000001582	Zkscan3	97	59.519	MGP_SPRETEiJ_G0019129	Zkscan4	99	59.335	Mus_spretus
ENSCGRG00000001582	Zkscan3	96	67.035	ENSPCAG00000000195	ZKSCAN4	99	67.035	Procavia_capensis
ENSCGRG00000001582	Zkscan3	97	70.588	ENSSSCG00000001204	ZKSCAN4	99	70.588	Sus_scrofa
ENSCGRG00000001582	Zkscan3	71	64.899	ENSTTRG00000015632	-	99	64.899	Tursiops_truncatus