EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000001621 (Gene tree)
Gene ID: -
Gene Symbol: Snrpn
Alias: 2410045I01Rik|Peg4|Pwcr1
Full Name: small nuclear ribonucleoprotein-associated protein N
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 5272 bases
Position: chrJH001080.1:55638-60909
Accession: 103159417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000002192	LSM	PF01423.22	6.7e-20	1	1
ENSCGRP00000002193	LSM	PF01423.22	7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000002246	-	756	XM_007649748	ENSCGRP00000002193	246 (aa)	XP_007647938	-
ENSCGRT00000002245	-	723	-	ENSCGRP00000002192	240 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000001621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000001621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000001621	Snrpn	89	92.019	ENSCGRG00000010423	Snrpb	95	92.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000001621	Snrpn	100	99.167	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSCGRG00000001621	Snrpn	99	98.745	ENSAMEG00000007034	SNRPN	99	97.942	Ailuropoda_melanoleuca
ENSCGRG00000001621	Snrpn	100	99.167	ENSANAG00000034241	SNRPN	100	99.167	Aotus_nancymaae
ENSCGRG00000001621	Snrpn	100	98.333	ENSBTAG00000008251	SNRPN	100	98.333	Bos_taurus
ENSCGRG00000001621	Snrpn	95	98.684	ENSCJAG00000042622	-	95	98.684	Callithrix_jacchus
ENSCGRG00000001621	Snrpn	100	99.167	ENSCJAG00000003759	-	100	99.167	Callithrix_jacchus
ENSCGRG00000001621	Snrpn	100	98.750	ENSCAFG00000010127	SNRPN	100	98.750	Canis_familiaris
ENSCGRG00000001621	Snrpn	100	98.750	ENSCAFG00020024075	SNRPN	100	98.750	Canis_lupus_dingo
ENSCGRG00000001621	Snrpn	100	98.333	ENSCHIG00000017477	SNRPN	100	98.333	Capra_hircus
ENSCGRG00000001621	Snrpn	100	99.167	ENSTSYG00000005248	SNRPN	100	99.167	Carlito_syrichta
ENSCGRG00000001621	Snrpn	100	99.167	ENSCAPG00000003047	SNRPN	100	99.167	Cavia_aperea
ENSCGRG00000001621	Snrpn	100	99.167	ENSCPOG00000020270	SNRPN	100	99.167	Cavia_porcellus
ENSCGRG00000001621	Snrpn	100	99.167	ENSCCAG00000024231	SNRPN	100	99.167	Cebus_capucinus
ENSCGRG00000001621	Snrpn	100	99.167	ENSCATG00000032518	SNRPN	100	99.167	Cercocebus_atys
ENSCGRG00000001621	Snrpn	100	99.167	ENSCLAG00000011376	SNRPN	100	99.167	Chinchilla_lanigera
ENSCGRG00000001621	Snrpn	100	99.167	ENSCSAG00000006406	SNRPN	100	99.167	Chlorocebus_sabaeus
ENSCGRG00000001621	Snrpn	98	98.291	ENSCHOG00000001846	SNRPN	88	98.291	Choloepus_hoffmanni
ENSCGRG00000001621	Snrpn	100	99.167	ENSCANG00000041156	SNRPN	100	99.167	Colobus_angolensis_palliatus
ENSCGRG00000001621	Snrpn	100	98.780	ENSCGRG00001004136	Snrpn	100	98.780	Cricetulus_griseus_chok1gshd
ENSCGRG00000001621	Snrpn	72	92.486	ENSCVAG00000014193	SNRPN	69	92.857	Cyprinodon_variegatus
ENSCGRG00000001621	Snrpn	99	98.326	ENSDNOG00000037060	SNRPN	98	98.326	Dasypus_novemcinctus
ENSCGRG00000001621	Snrpn	100	99.167	ENSDORG00000004527	Snrpn	100	99.167	Dipodomys_ordii
ENSCGRG00000001621	Snrpn	100	98.750	ENSEASG00005017871	SNRPN	100	98.750	Equus_asinus_asinus
ENSCGRG00000001621	Snrpn	100	98.750	ENSECAG00000018148	SNRPN	100	98.750	Equus_caballus
ENSCGRG00000001621	Snrpn	99	98.326	ENSEEUG00000007440	-	100	98.326	Erinaceus_europaeus
ENSCGRG00000001621	Snrpn	100	98.750	ENSFCAG00000022298	-	100	98.750	Felis_catus
ENSCGRG00000001621	Snrpn	76	85.246	ENSFDAG00000010528	-	68	89.928	Fukomys_damarensis
ENSCGRG00000001621	Snrpn	100	99.167	ENSFDAG00000016578	-	100	99.167	Fukomys_damarensis
ENSCGRG00000001621	Snrpn	74	76.836	ENSGMOG00000018161	SNRPN	74	76.190	Gadus_morhua
ENSCGRG00000001621	Snrpn	90	72.558	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSCGRG00000001621	Snrpn	100	99.167	ENSGGOG00000003988	SNRPN	100	99.167	Gorilla_gorilla
ENSCGRG00000001621	Snrpn	100	84.583	ENSHGLG00000002327	-	88	84.038	Heterocephalus_glaber_female
ENSCGRG00000001621	Snrpn	73	83.333	ENSHGLG00000020936	-	71	81.548	Heterocephalus_glaber_female
ENSCGRG00000001621	Snrpn	89	91.549	ENSHGLG00000019812	-	89	91.080	Heterocephalus_glaber_female
ENSCGRG00000001621	Snrpn	100	99.167	ENSHGLG00000011924	SNRPN	100	99.167	Heterocephalus_glaber_female
ENSCGRG00000001621	Snrpn	89	91.549	ENSHGLG00100021056	-	89	91.080	Heterocephalus_glaber_male
ENSCGRG00000001621	Snrpn	100	99.167	ENSHGLG00100016559	SNRPN	100	99.167	Heterocephalus_glaber_male
ENSCGRG00000001621	Snrpn	100	82.083	ENSHGLG00100004881	-	88	82.160	Heterocephalus_glaber_male
ENSCGRG00000001621	Snrpn	100	99.167	ENSSTOG00000001339	SNRPN	100	99.167	Ictidomys_tridecemlineatus
ENSCGRG00000001621	Snrpn	99	99.163	ENSLAFG00000009458	SNRPN	100	99.167	Loxodonta_africana
ENSCGRG00000001621	Snrpn	100	99.167	ENSMFAG00000042235	SNRPN	100	99.167	Macaca_fascicularis
ENSCGRG00000001621	Snrpn	100	99.167	ENSMMUG00000023139	SNURF	100	99.167	Macaca_mulatta
ENSCGRG00000001621	Snrpn	100	99.167	ENSMNEG00000031291	SNRPN	100	99.167	Macaca_nemestrina
ENSCGRG00000001621	Snrpn	100	99.167	ENSMLEG00000038837	SNRPN	100	99.167	Mandrillus_leucophaeus
ENSCGRG00000001621	Snrpn	92	85.455	ENSMGAG00000008696	SNRPN	92	85.455	Meleagris_gallopavo
ENSCGRG00000001621	Snrpn	100	99.167	ENSMAUG00000000051	Snrpn	100	99.167	Mesocricetus_auratus
ENSCGRG00000001621	Snrpn	100	99.167	ENSMICG00000042356	SNRPN	100	99.167	Microcebus_murinus
ENSCGRG00000001621	Snrpn	100	99.167	ENSMOCG00000015350	Snrpn	100	99.167	Microtus_ochrogaster
ENSCGRG00000001621	Snrpn	92	93.665	ENSMODG00000013926	-	92	93.665	Monodelphis_domestica
ENSCGRG00000001621	Snrpn	100	99.167	MGP_CAROLIEiJ_G0029815	Snrpn	100	99.167	Mus_caroli
ENSCGRG00000001621	Snrpn	100	99.167	ENSMUSG00000102252	Snrpn	100	99.167	Mus_musculus
ENSCGRG00000001621	Snrpn	100	99.167	MGP_PahariEiJ_G0013040	Snrpn	100	99.167	Mus_pahari
ENSCGRG00000001621	Snrpn	100	99.167	MGP_SPRETEiJ_G0030918	Snrpn	100	99.167	Mus_spretus
ENSCGRG00000001621	Snrpn	74	57.542	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSCGRG00000001621	Snrpn	100	98.750	ENSMPUG00000014638	-	100	98.750	Mustela_putorius_furo
ENSCGRG00000001621	Snrpn	99	98.745	ENSMLUG00000023361	-	98	98.750	Myotis_lucifugus
ENSCGRG00000001621	Snrpn	85	60.784	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSCGRG00000001621	Snrpn	95	62.281	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSCGRG00000001621	Snrpn	100	99.167	ENSNGAG00000000181	Snrpn	100	99.167	Nannospalax_galili
ENSCGRG00000001621	Snrpn	100	82.917	ENSNLEG00000001376	SNRPN	100	82.158	Nomascus_leucogenys
ENSCGRG00000001621	Snrpn	100	99.167	ENSODEG00000013478	-	100	99.167	Octodon_degus
ENSCGRG00000001621	Snrpn	98	80.769	ENSODEG00000016065	-	73	92.547	Octodon_degus
ENSCGRG00000001621	Snrpn	100	95.417	ENSODEG00000019708	-	89	99.052	Octodon_degus
ENSCGRG00000001621	Snrpn	100	98.750	ENSODEG00000020110	-	100	98.750	Octodon_degus
ENSCGRG00000001621	Snrpn	100	98.755	ENSOCUG00000003532	-	100	98.755	Oryctolagus_cuniculus
ENSCGRG00000001621	Snrpn	74	92.090	ENSORLG00020007490	SNRPN	69	93.452	Oryzias_latipes_hni
ENSCGRG00000001621	Snrpn	74	92.090	ENSORLG00015003332	SNRPN	69	93.452	Oryzias_latipes_hsok
ENSCGRG00000001621	Snrpn	74	92.655	ENSOMEG00000002066	SNRPN	69	94.048	Oryzias_melastigma
ENSCGRG00000001621	Snrpn	100	99.167	ENSOGAG00000007392	SNRPN	100	99.167	Otolemur_garnettii
ENSCGRG00000001621	Snrpn	100	98.333	ENSOARG00000009080	SNRPN	100	98.333	Ovis_aries
ENSCGRG00000001621	Snrpn	97	68.376	ENSPPAG00000034049	-	65	79.720	Pan_paniscus
ENSCGRG00000001621	Snrpn	100	99.167	ENSPPAG00000027650	SNRPN	100	99.167	Pan_paniscus
ENSCGRG00000001621	Snrpn	85	63.415	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSCGRG00000001621	Snrpn	100	98.750	ENSPPRG00000019878	-	100	98.750	Panthera_pardus
ENSCGRG00000001621	Snrpn	100	98.333	ENSPTIG00000004537	SNRPN	100	98.333	Panthera_tigris_altaica
ENSCGRG00000001621	Snrpn	97	68.803	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSCGRG00000001621	Snrpn	100	99.167	ENSPTRG00000006826	SNRPN	100	99.167	Pan_troglodytes
ENSCGRG00000001621	Snrpn	100	99.167	ENSPANG00000020142	SNRPN	100	99.167	Papio_anubis
ENSCGRG00000001621	Snrpn	89	95.327	ENSPEMG00000020979	-	89	95.305	Peromyscus_maniculatus_bairdii
ENSCGRG00000001621	Snrpn	100	99.167	ENSPEMG00000012911	-	100	99.167	Peromyscus_maniculatus_bairdii
ENSCGRG00000001621	Snrpn	89	85.446	ENSPEMG00000013920	-	88	85.915	Peromyscus_maniculatus_bairdii
ENSCGRG00000001621	Snrpn	76	97.253	ENSPCIG00000004699	-	69	93.488	Phascolarctos_cinereus
ENSCGRG00000001621	Snrpn	72	93.642	ENSPMEG00000020674	SNRPN	69	93.452	Poecilia_mexicana
ENSCGRG00000001621	Snrpn	100	99.167	ENSPPYG00000006269	SNURF	100	99.167	Pongo_abelii
ENSCGRG00000001621	Snrpn	100	99.167	ENSPCOG00000014231	SNRPN	100	99.167	Propithecus_coquereli
ENSCGRG00000001621	Snrpn	100	99.167	ENSRNOG00000059764	Snrpn	100	99.167	Rattus_norvegicus
ENSCGRG00000001621	Snrpn	100	99.167	ENSRBIG00000041765	SNRPN	100	99.167	Rhinopithecus_bieti
ENSCGRG00000001621	Snrpn	100	99.167	ENSRROG00000035157	SNRPN	100	99.167	Rhinopithecus_roxellana
ENSCGRG00000001621	Snrpn	100	97.917	ENSSBOG00000024929	-	100	97.917	Saimiri_boliviensis_boliviensis
ENSCGRG00000001621	Snrpn	100	99.167	ENSSBOG00000000110	-	100	99.167	Saimiri_boliviensis_boliviensis
ENSCGRG00000001621	Snrpn	76	96.721	ENSSHAG00000010257	-	87	94.340	Sarcophilus_harrisii
ENSCGRG00000001621	Snrpn	99	77.406	ENSSARG00000000072	SNRPN	100	77.406	Sorex_araneus
ENSCGRG00000001621	Snrpn	100	98.750	ENSSSCG00000028124	SNRPN	100	98.750	Sus_scrofa
ENSCGRG00000001621	Snrpn	100	98.333	ENSTTRG00000010966	SNRPN	89	98.333	Tursiops_truncatus
ENSCGRG00000001621	Snrpn	93	98.655	ENSUAMG00000016284	SNRPN	78	98.655	Ursus_americanus
ENSCGRG00000001621	Snrpn	100	98.750	ENSUMAG00000025589	SNRPN	100	98.750	Ursus_maritimus
ENSCGRG00000001621	Snrpn	95	98.690	ENSVVUG00000017971	SNRPN	94	98.690	Vulpes_vulpes