EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000001708 (Gene tree)
Gene ID: -
Gene Symbol: Sf1
Alias: CW17R|MZFM|WBP4|Zfp162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 13455 bases
Position: chrJH001367.1:177640-191094
Accession: 100760817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000002319	KH_1	PF00013.29	2.1e-07	1	1
ENSCGRP00000002318	KH_1	PF00013.29	2.1e-07	1	1
ENSCGRP00000002318	zf-CCHC	PF00098.23	0.00013	1	1
ENSCGRP00000002319	zf-CCHC	PF00098.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000002372	-	2415	XM_016979808	ENSCGRP00000002318	560 (aa)	XP_016835297	-
ENSCGRT00000002373	-	2174	-	ENSCGRP00000002319	543 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000001708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000001708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000001708	Sf1	69	81.201	ENSAPOG00000012341	sf1	60	76.471	Acanthochromis_polyacanthus
ENSCGRG00000001708	Sf1	97	97.714	ENSAMEG00000017828	SF1	82	97.714	Ailuropoda_melanoleuca
ENSCGRG00000001708	Sf1	65	84.196	ENSACIG00000016514	sf1	61	78.780	Amphilophus_citrinellus
ENSCGRG00000001708	Sf1	69	80.940	ENSAOCG00000010934	sf1	60	76.471	Amphiprion_ocellaris
ENSCGRG00000001708	Sf1	69	80.940	ENSAPEG00000009498	sf1	60	76.471	Amphiprion_percula
ENSCGRG00000001708	Sf1	68	81.316	ENSATEG00000001894	sf1	59	78.125	Anabas_testudineus
ENSCGRG00000001708	Sf1	95	85.493	ENSANAG00000022607	-	89	87.978	Aotus_nancymaae
ENSCGRG00000001708	Sf1	100	98.346	ENSANAG00000026664	-	98	97.500	Aotus_nancymaae
ENSCGRG00000001708	Sf1	67	84.824	ENSACLG00000007633	sf1	61	77.938	Astatotilapia_calliptera
ENSCGRG00000001708	Sf1	68	86.096	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSCGRG00000001708	Sf1	97	97.905	ENSBTAG00000001035	SF1	82	97.905	Bos_taurus
ENSCGRG00000001708	Sf1	99	99.255	ENSCJAG00000002780	SF1	82	97.905	Callithrix_jacchus
ENSCGRG00000001708	Sf1	97	97.905	ENSCAFG00000014239	SF1	82	97.905	Canis_familiaris
ENSCGRG00000001708	Sf1	97	97.905	ENSCAFG00020014381	SF1	82	97.905	Canis_lupus_dingo
ENSCGRG00000001708	Sf1	99	99.255	ENSCHIG00000025867	SF1	98	99.255	Capra_hircus
ENSCGRG00000001708	Sf1	57	98.221	ENSTSYG00000033618	SF1	89	100.000	Carlito_syrichta
ENSCGRG00000001708	Sf1	100	97.321	ENSCAPG00000010762	SF1	100	97.321	Cavia_aperea
ENSCGRG00000001708	Sf1	99	98.883	ENSCPOG00000012290	SF1	100	98.883	Cavia_porcellus
ENSCGRG00000001708	Sf1	95	84.302	ENSCCAG00000023781	-	88	87.140	Cebus_capucinus
ENSCGRG00000001708	Sf1	99	99.255	ENSCCAG00000037881	SF1	93	99.242	Cebus_capucinus
ENSCGRG00000001708	Sf1	97	97.905	ENSCATG00000011564	SF1	95	98.105	Cercocebus_atys
ENSCGRG00000001708	Sf1	99	99.255	ENSCSAG00000007258	SF1	98	99.255	Chlorocebus_sabaeus
ENSCGRG00000001708	Sf1	76	92.961	ENSCHOG00000006008	SF1	79	93.062	Choloepus_hoffmanni
ENSCGRG00000001708	Sf1	95	86.434	ENSCPBG00000023763	SF1	66	85.078	Chrysemys_picta_bellii
ENSCGRG00000001708	Sf1	57	67.093	ENSCING00000005564	-	72	61.667	Ciona_intestinalis
ENSCGRG00000001708	Sf1	94	52.987	ENSCSAVG00000009055	-	87	56.438	Ciona_savignyi
ENSCGRG00000001708	Sf1	97	97.905	ENSCANG00000042201	SF1	88	99.185	Colobus_angolensis_palliatus
ENSCGRG00000001708	Sf1	100	100.000	ENSCGRG00001003677	Sf1	98	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000001708	Sf1	72	79.052	ENSCSEG00000014375	sf1	57	76.077	Cynoglossus_semilaevis
ENSCGRG00000001708	Sf1	68	85.326	ENSCVAG00000001670	sf1	63	79.115	Cyprinodon_variegatus
ENSCGRG00000001708	Sf1	71	81.122	ENSDARG00000008188	sf1	70	78.469	Danio_rerio
ENSCGRG00000001708	Sf1	99	98.696	ENSDNOG00000001282	SF1	98	98.696	Dasypus_novemcinctus
ENSCGRG00000001708	Sf1	97	97.905	ENSDORG00000016334	Sf1	82	97.905	Dipodomys_ordii
ENSCGRG00000001708	Sf1	97	89.714	ENSETEG00000012830	SF1	73	89.714	Echinops_telfairi
ENSCGRG00000001708	Sf1	99	98.883	ENSEASG00005018272	SF1	98	98.883	Equus_asinus_asinus
ENSCGRG00000001708	Sf1	99	99.069	ENSECAG00000024544	SF1	98	99.069	Equus_caballus
ENSCGRG00000001708	Sf1	72	98.473	ENSEEUG00000001058	SF1	100	98.473	Erinaceus_europaeus
ENSCGRG00000001708	Sf1	67	82.258	ENSELUG00000013225	sf1	53	79.661	Esox_lucius
ENSCGRG00000001708	Sf1	99	99.255	ENSFCAG00000012231	SF1	82	97.905	Felis_catus
ENSCGRG00000001708	Sf1	100	97.500	ENSFDAG00000009833	SF1	100	97.500	Fukomys_damarensis
ENSCGRG00000001708	Sf1	68	82.011	ENSFHEG00000022656	sf1	59	77.435	Fundulus_heteroclitus
ENSCGRG00000001708	Sf1	68	84.718	ENSGAFG00000019284	sf1	76	80.637	Gambusia_affinis
ENSCGRG00000001708	Sf1	69	79.534	ENSGACG00000000826	sf1	66	76.658	Gasterosteus_aculeatus
ENSCGRG00000001708	Sf1	84	88.767	ENSGAGG00000021691	SF1	72	85.078	Gopherus_agassizii
ENSCGRG00000001708	Sf1	65	83.733	ENSHBUG00000011598	sf1	59	77.069	Haplochromis_burtoni
ENSCGRG00000001708	Sf1	100	97.500	ENSHGLG00000009541	SF1	98	97.500	Heterocephalus_glaber_female
ENSCGRG00000001708	Sf1	80	88.736	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSCGRG00000001708	Sf1	83	86.237	ENSHGLG00100008255	-	92	85.806	Heterocephalus_glaber_male
ENSCGRG00000001708	Sf1	100	97.500	ENSHGLG00100013879	-	100	97.500	Heterocephalus_glaber_male
ENSCGRG00000001708	Sf1	69	81.039	ENSHCOG00000011388	sf1	58	76.998	Hippocampus_comes
ENSCGRG00000001708	Sf1	95	88.566	ENSSTOG00000024353	-	98	82.531	Ictidomys_tridecemlineatus
ENSCGRG00000001708	Sf1	97	97.905	ENSSTOG00000009790	-	84	97.905	Ictidomys_tridecemlineatus
ENSCGRG00000001708	Sf1	97	98.095	ENSJJAG00000011788	Sf1	82	98.095	Jaculus_jaculus
ENSCGRG00000001708	Sf1	66	84.031	ENSKMAG00000005854	sf1	61	78.692	Kryptolebias_marmoratus
ENSCGRG00000001708	Sf1	69	82.507	ENSLBEG00000019836	sf1	63	78.450	Labrus_bergylta
ENSCGRG00000001708	Sf1	75	78.986	ENSLACG00000018493	SF1	73	79.024	Latimeria_chalumnae
ENSCGRG00000001708	Sf1	68	85.523	ENSLOCG00000002130	sf1	58	80.247	Lepisosteus_oculatus
ENSCGRG00000001708	Sf1	97	97.524	ENSLAFG00000007201	SF1	81	97.524	Loxodonta_africana
ENSCGRG00000001708	Sf1	97	97.905	ENSMFAG00000033122	SF1	94	98.105	Macaca_fascicularis
ENSCGRG00000001708	Sf1	99	99.255	ENSMMUG00000022606	SF1	99	98.765	Macaca_mulatta
ENSCGRG00000001708	Sf1	99	98.162	ENSMNEG00000037901	SF1	94	98.105	Macaca_nemestrina
ENSCGRG00000001708	Sf1	97	97.905	ENSMLEG00000040706	SF1	94	98.105	Mandrillus_leucophaeus
ENSCGRG00000001708	Sf1	65	82.888	ENSMAMG00000001780	sf1	58	78.208	Mastacembelus_armatus
ENSCGRG00000001708	Sf1	65	83.467	ENSMZEG00005009196	sf1	59	76.832	Maylandia_zebra
ENSCGRG00000001708	Sf1	100	99.643	ENSMAUG00000014064	Sf1	98	99.643	Mesocricetus_auratus
ENSCGRG00000001708	Sf1	99	99.255	ENSMICG00000001202	SF1	93	98.992	Microcebus_murinus
ENSCGRG00000001708	Sf1	100	99.643	ENSMOCG00000022038	Sf1	98	99.643	Microtus_ochrogaster
ENSCGRG00000001708	Sf1	67	82.016	ENSMMOG00000020474	sf1	59	77.262	Mola_mola
ENSCGRG00000001708	Sf1	82	94.157	ENSMODG00000029407	SF1	96	94.157	Monodelphis_domestica
ENSCGRG00000001708	Sf1	68	83.198	ENSMALG00000020521	sf1	67	77.053	Monopterus_albus
ENSCGRG00000001708	Sf1	100	99.464	MGP_CAROLIEiJ_G0022607	Sf1	100	100.000	Mus_caroli
ENSCGRG00000001708	Sf1	100	99.464	ENSMUSG00000024949	Sf1	100	100.000	Mus_musculus
ENSCGRG00000001708	Sf1	100	99.286	MGP_PahariEiJ_G0014101	Sf1	100	100.000	Mus_pahari
ENSCGRG00000001708	Sf1	100	99.464	MGP_SPRETEiJ_G0023518	Sf1	100	100.000	Mus_spretus
ENSCGRG00000001708	Sf1	98	97.175	ENSMPUG00000012684	SF1	83	97.175	Mustela_putorius_furo
ENSCGRG00000001708	Sf1	82	93.722	ENSMLUG00000029800	-	76	94.131	Myotis_lucifugus
ENSCGRG00000001708	Sf1	97	97.524	ENSMLUG00000015217	-	82	97.524	Myotis_lucifugus
ENSCGRG00000001708	Sf1	100	97.679	ENSNGAG00000005550	Sf1	98	97.679	Nannospalax_galili
ENSCGRG00000001708	Sf1	67	84.824	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSCGRG00000001708	Sf1	97	97.905	ENSNLEG00000005236	-	88	99.185	Nomascus_leucogenys
ENSCGRG00000001708	Sf1	98	98.305	ENSMEUG00000013424	SF1	100	98.305	Notamacropus_eugenii
ENSCGRG00000001708	Sf1	91	98.586	ENSOPRG00000005008	SF1	100	98.586	Ochotona_princeps
ENSCGRG00000001708	Sf1	84	96.930	ENSODEG00000006102	-	98	76.886	Octodon_degus
ENSCGRG00000001708	Sf1	65	83.200	ENSONIG00000015728	sf1	59	76.596	Oreochromis_niloticus
ENSCGRG00000001708	Sf1	74	86.207	ENSOANG00000002909	SF1	96	87.212	Ornithorhynchus_anatinus
ENSCGRG00000001708	Sf1	97	97.714	ENSOCUG00000026486	SF1	83	97.714	Oryctolagus_cuniculus
ENSCGRG00000001708	Sf1	70	81.395	ENSORLG00000011853	sf1	58	77.724	Oryzias_latipes
ENSCGRG00000001708	Sf1	70	81.395	ENSORLG00020011834	sf1	58	77.724	Oryzias_latipes_hni
ENSCGRG00000001708	Sf1	68	81.217	ENSORLG00015012855	sf1	58	77.240	Oryzias_latipes_hsok
ENSCGRG00000001708	Sf1	66	82.011	ENSOMEG00000005210	sf1	59	77.724	Oryzias_melastigma
ENSCGRG00000001708	Sf1	97	97.905	ENSOGAG00000016196	SF1	82	97.905	Otolemur_garnettii
ENSCGRG00000001708	Sf1	95	94.649	ENSOARG00000009166	SF1	80	99.342	Ovis_aries
ENSCGRG00000001708	Sf1	94	97.843	ENSPPAG00000002799	-	95	99.242	Pan_paniscus
ENSCGRG00000001708	Sf1	99	99.255	ENSPPRG00000013566	SF1	83	97.843	Panthera_pardus
ENSCGRG00000001708	Sf1	100	89.821	ENSPTIG00000016141	SF1	98	88.869	Panthera_tigris_altaica
ENSCGRG00000001708	Sf1	99	99.255	ENSPTRG00000003846	SF1	97	99.277	Pan_troglodytes
ENSCGRG00000001708	Sf1	99	99.255	ENSPANG00000020754	SF1	98	99.255	Papio_anubis
ENSCGRG00000001708	Sf1	60	79.279	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSCGRG00000001708	Sf1	64	86.895	ENSPSIG00000003610	SF1	81	81.446	Pelodiscus_sinensis
ENSCGRG00000001708	Sf1	100	99.286	ENSPEMG00000010463	Sf1	98	99.286	Peromyscus_maniculatus_bairdii
ENSCGRG00000001708	Sf1	62	72.321	ENSPMAG00000008272	sf1	53	67.209	Petromyzon_marinus
ENSCGRG00000001708	Sf1	97	96.952	ENSPCIG00000018173	SF1	83	96.952	Phascolarctos_cinereus
ENSCGRG00000001708	Sf1	68	85.870	ENSPFOG00000013683	sf1	66	80.882	Poecilia_formosa
ENSCGRG00000001708	Sf1	68	84.350	ENSPLAG00000018076	sf1	61	79.376	Poecilia_latipinna
ENSCGRG00000001708	Sf1	68	84.350	ENSPMEG00000005726	sf1	62	79.616	Poecilia_mexicana
ENSCGRG00000001708	Sf1	68	83.820	ENSPREG00000004155	sf1	59	78.897	Poecilia_reticulata
ENSCGRG00000001708	Sf1	97	97.905	ENSPPYG00000003098	-	98	99.419	Pongo_abelii
ENSCGRG00000001708	Sf1	99	98.510	ENSPCAG00000013631	SF1	80	98.510	Procavia_capensis
ENSCGRG00000001708	Sf1	97	97.905	ENSPCOG00000027546	SF1	93	98.992	Propithecus_coquereli
ENSCGRG00000001708	Sf1	99	98.696	ENSPVAG00000016938	SF1	81	98.696	Pteropus_vampyrus
ENSCGRG00000001708	Sf1	65	83.467	ENSPNYG00000004673	sf1	59	76.832	Pundamilia_nyererei
ENSCGRG00000001708	Sf1	68	85.867	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSCGRG00000001708	Sf1	97	98.476	ENSRNOG00000021085	Sf1	94	99.787	Rattus_norvegicus
ENSCGRG00000001708	Sf1	100	90.000	ENSRBIG00000042818	SF1	89	98.922	Rhinopithecus_bieti
ENSCGRG00000001708	Sf1	100	96.964	ENSRROG00000045655	SF1	100	99.234	Rhinopithecus_roxellana
ENSCGRG00000001708	Sf1	54	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSCGRG00000001708	Sf1	95	76.744	ENSSBOG00000022267	-	97	80.494	Saimiri_boliviensis_boliviensis
ENSCGRG00000001708	Sf1	73	93.250	ENSSHAG00000006841	SF1	73	94.500	Sarcophilus_harrisii
ENSCGRG00000001708	Sf1	72	80.750	ENSSFOG00015021978	sf1	55	77.482	Scleropages_formosus
ENSCGRG00000001708	Sf1	76	76.112	ENSSMAG00000007549	sf1	62	76.905	Scophthalmus_maximus
ENSCGRG00000001708	Sf1	65	81.818	ENSSDUG00000003903	sf1	61	77.482	Seriola_dumerili
ENSCGRG00000001708	Sf1	65	81.818	ENSSLDG00000013075	sf1	59	77.482	Seriola_lalandi_dorsalis
ENSCGRG00000001708	Sf1	95	95.164	ENSSARG00000008180	SF1	100	95.164	Sorex_araneus
ENSCGRG00000001708	Sf1	81	85.185	ENSSPUG00000012907	SF1	86	80.998	Sphenodon_punctatus
ENSCGRG00000001708	Sf1	69	80.679	ENSSPAG00000019060	sf1	58	75.887	Stegastes_partitus
ENSCGRG00000001708	Sf1	99	99.069	ENSSSCG00000013021	SF1	98	99.069	Sus_scrofa
ENSCGRG00000001708	Sf1	97	61.049	ENSTNIG00000004820	sf1	77	69.660	Tetraodon_nigroviridis
ENSCGRG00000001708	Sf1	85	91.595	ENSTBEG00000013133	SF1	67	91.558	Tupaia_belangeri
ENSCGRG00000001708	Sf1	99	95.531	ENSTTRG00000008857	SF1	100	95.531	Tursiops_truncatus
ENSCGRG00000001708	Sf1	78	94.299	ENSUAMG00000011977	SF1	80	94.299	Ursus_americanus
ENSCGRG00000001708	Sf1	100	89.107	ENSUMAG00000007268	SF1	89	98.701	Ursus_maritimus
ENSCGRG00000001708	Sf1	65	99.597	ENSVPAG00000011912	SF1	66	99.597	Vicugna_pacos
ENSCGRG00000001708	Sf1	99	99.255	ENSVVUG00000028585	SF1	98	99.255	Vulpes_vulpes
ENSCGRG00000001708	Sf1	85	76.546	ENSXETG00000008434	sf1	67	81.618	Xenopus_tropicalis
ENSCGRG00000001708	Sf1	67	85.753	ENSXCOG00000003704	sf1	75	81.188	Xiphophorus_couchianus
ENSCGRG00000001708	Sf1	68	83.598	ENSXMAG00000007822	sf1	61	79.616	Xiphophorus_maculatus