EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000001914 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: 1700108L22Rik|4933421B21Rik|Larp2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 110023 bases
Position: chrJH000516.1:433640-543662
Accession: 100772564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000002618	La	PF05383.17	1.4e-22	1	1
ENSCGRP00000002620	La	PF05383.17	2.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000002673	-	1885	XM_007645354	ENSCGRP00000002618	335 (aa)	XP_007643544	UPI0007DAA2E9
ENSCGRT00000002675	-	867	-	ENSCGRP00000002620	288 (aa)	-	-
ENSCGRT00000002674	-	3643	XM_007645348	ENSCGRP00000002619	14 (aa)	XP_007643538	UPI000620A999

Gene Model

Click here to download ENSCGRG00000001914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000001914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000001914	-	100	89.254	ENSG00000138709	LARP1B	100	89.254	Homo_sapiens
ENSCGRG00000001914	-	100	91.045	ENSAMEG00000002748	LARP1B	100	91.045	Ailuropoda_melanoleuca
ENSCGRG00000001914	-	99	77.576	ENSANAG00000034618	LARP1B	96	77.576	Aotus_nancymaae
ENSCGRG00000001914	-	98	88.182	ENSBTAG00000012135	LARP1B	63	88.182	Bos_taurus
ENSCGRG00000001914	-	100	91.343	ENSCJAG00000003338	LARP1B	100	91.343	Callithrix_jacchus
ENSCGRG00000001914	-	100	91.319	ENSCAFG00020018899	LARP1B	100	91.319	Canis_lupus_dingo
ENSCGRG00000001914	-	100	88.581	ENSCHIG00000023144	LARP1B	100	88.581	Capra_hircus
ENSCGRG00000001914	-	99	86.760	ENSTSYG00000002037	-	99	86.760	Carlito_syrichta
ENSCGRG00000001914	-	76	94.643	ENSCPOG00000034668	-	93	94.643	Cavia_porcellus
ENSCGRG00000001914	-	99	90.719	ENSCCAG00000021948	LARP1B	99	90.719	Cebus_capucinus
ENSCGRG00000001914	-	100	86.866	ENSCATG00000013541	LARP1B	100	86.866	Cercocebus_atys
ENSCGRG00000001914	-	100	86.806	ENSCLAG00000006448	-	100	86.806	Chinchilla_lanigera
ENSCGRG00000001914	-	100	90.625	ENSCANG00000026958	LARP1B	100	90.625	Colobus_angolensis_palliatus
ENSCGRG00000001914	-	100	99.701	ENSCGRG00001004660	-	100	99.701	Cricetulus_griseus_chok1gshd
ENSCGRG00000001914	-	98	89.666	ENSDNOG00000018765	-	64	89.666	Dasypus_novemcinctus
ENSCGRG00000001914	-	99	91.986	ENSEASG00005018106	LARP1B	99	91.986	Equus_asinus_asinus
ENSCGRG00000001914	-	100	90.746	ENSFCAG00000014650	-	100	90.746	Felis_catus
ENSCGRG00000001914	-	100	89.254	ENSGGOG00000015900	LARP1B	100	89.254	Gorilla_gorilla
ENSCGRG00000001914	-	100	86.644	ENSHGLG00000006728	-	99	86.644	Heterocephalus_glaber_female
ENSCGRG00000001914	-	98	74.772	ENSHGLG00000013922	-	96	74.468	Heterocephalus_glaber_female
ENSCGRG00000001914	-	100	87.500	ENSHGLG00100014041	-	96	86.567	Heterocephalus_glaber_male
ENSCGRG00000001914	-	98	74.772	ENSHGLG00100016491	-	96	74.468	Heterocephalus_glaber_male
ENSCGRG00000001914	-	96	71.963	ENSSTOG00000034510	-	87	71.963	Ictidomys_tridecemlineatus
ENSCGRG00000001914	-	100	89.965	ENSSTOG00000008596	-	100	89.965	Ictidomys_tridecemlineatus
ENSCGRG00000001914	-	90	75.676	ENSSTOG00000033183	-	97	75.299	Ictidomys_tridecemlineatus
ENSCGRG00000001914	-	99	81.269	ENSSTOG00000021917	-	94	80.665	Ictidomys_tridecemlineatus
ENSCGRG00000001914	-	99	90.592	ENSJJAG00000022360	Larp1b	99	90.592	Jaculus_jaculus
ENSCGRG00000001914	-	98	71.601	ENSLACG00000015247	LARP1B	85	69.578	Latimeria_chalumnae
ENSCGRG00000001914	-	99	91.964	ENSLAFG00000008473	-	99	91.964	Loxodonta_africana
ENSCGRG00000001914	-	100	65.278	ENSMFAG00000003306	-	93	86.897	Macaca_fascicularis
ENSCGRG00000001914	-	100	90.448	ENSMFAG00000002218	LARP1B	100	90.448	Macaca_fascicularis
ENSCGRG00000001914	-	100	90.448	ENSMMUG00000021347	LARP1B	100	90.448	Macaca_mulatta
ENSCGRG00000001914	-	75	87.413	ENSMNEG00000027747	-	89	87.413	Macaca_nemestrina
ENSCGRG00000001914	-	84	55.785	ENSMZEG00005002545	larp1b	54	55.185	Maylandia_zebra
ENSCGRG00000001914	-	100	98.806	ENSMAUG00000007879	-	100	98.806	Mesocricetus_auratus
ENSCGRG00000001914	-	98	82.517	ENSMICG00000037883	-	88	82.517	Microcebus_murinus
ENSCGRG00000001914	-	97	68.712	ENSMICG00000028052	-	63	68.712	Microcebus_murinus
ENSCGRG00000001914	-	100	92.836	ENSMICG00000036111	LARP1B	100	92.836	Microcebus_murinus
ENSCGRG00000001914	-	79	98.099	ENSMOCG00000001490	Larp1b	95	98.099	Microtus_ochrogaster
ENSCGRG00000001914	-	100	95.224	MGP_CAROLIEiJ_G0024962	Larp1b	100	95.224	Mus_caroli
ENSCGRG00000001914	-	100	96.119	ENSMUSG00000025762	Larp1b	100	96.119	Mus_musculus
ENSCGRG00000001914	-	100	95.821	MGP_PahariEiJ_G0026403	Larp1b	100	95.821	Mus_pahari
ENSCGRG00000001914	-	100	96.119	MGP_SPRETEiJ_G0025897	Larp1b	100	96.119	Mus_spretus
ENSCGRG00000001914	-	100	89.552	ENSNLEG00000013819	LARP1B	100	89.552	Nomascus_leucogenys
ENSCGRG00000001914	-	100	86.458	ENSODEG00000001292	-	100	86.458	Octodon_degus
ENSCGRG00000001914	-	100	88.955	ENSPPAG00000030439	LARP1B	100	88.955	Pan_paniscus
ENSCGRG00000001914	-	100	90.746	ENSPPRG00000002743	-	100	90.746	Panthera_pardus
ENSCGRG00000001914	-	100	90.746	ENSPTIG00000011225	LARP1B	100	90.746	Panthera_tigris_altaica
ENSCGRG00000001914	-	100	89.254	ENSPTRG00000016437	LARP1B	100	89.254	Pan_troglodytes
ENSCGRG00000001914	-	100	90.149	ENSPANG00000012488	LARP1B	100	90.149	Papio_anubis
ENSCGRG00000001914	-	99	85.672	ENSPCIG00000026516	LARP1B	87	86.364	Phascolarctos_cinereus
ENSCGRG00000001914	-	99	51.771	ENSPFOG00000022837	-	52	51.499	Poecilia_formosa
ENSCGRG00000001914	-	79	60.965	ENSPREG00000005955	-	89	55.986	Poecilia_reticulata
ENSCGRG00000001914	-	100	91.940	ENSPCOG00000021874	LARP1B	100	91.940	Propithecus_coquereli
ENSCGRG00000001914	-	100	97.313	ENSRNOG00000038366	Larp1b	100	97.313	Rattus_norvegicus
ENSCGRG00000001914	-	100	88.060	ENSRBIG00000039982	-	100	87.463	Rhinopithecus_bieti
ENSCGRG00000001914	-	100	80.896	ENSRBIG00000038568	-	92	80.896	Rhinopithecus_bieti
ENSCGRG00000001914	-	100	82.353	ENSRROG00000038525	-	96	82.353	Rhinopithecus_roxellana
ENSCGRG00000001914	-	100	90.448	ENSRROG00000030771	LARP1B	100	90.448	Rhinopithecus_roxellana
ENSCGRG00000001914	-	99	55.052	ENSSSCG00000040491	-	99	77.778	Sus_scrofa
ENSCGRG00000001914	-	98	89.362	ENSSSCG00000034280	LARP1B	63	89.362	Sus_scrofa
ENSCGRG00000001914	-	100	80.299	ENSUAMG00000016938	-	91	94.083	Ursus_americanus
ENSCGRG00000001914	-	98	90.274	ENSVVUG00000011307	LARP1B	65	90.274	Vulpes_vulpes