EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000002085 (Gene tree)
Gene ID: -
Gene Symbol: Htatsf1
Alias: 1600023H17Rik|2600017A12Rik|2700077B20Rik|TAT-SF1
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 9878 bases
Position: chrJH000176.1:1286978-1296855
Accession: 100767363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000002849	RRM_1	PF00076.22	5.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000002909	-	2073	XM_007640573	ENSCGRP00000002849	690 (aa)	XP_007638763	-

Gene Model

Click here to download ENSCGRG00000002085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000002085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000002085	Htatsf1	99	68.759	ENSG00000102241	HTATSF1	73	70.796	Homo_sapiens
ENSCGRG00000002085	Htatsf1	99	68.880	ENSAMEG00000002921	HTATSF1	74	72.105	Ailuropoda_melanoleuca
ENSCGRG00000002085	Htatsf1	99	65.139	ENSANAG00000025458	-	77	66.312	Aotus_nancymaae
ENSCGRG00000002085	Htatsf1	99	60.056	ENSANAG00000027986	-	72	59.286	Aotus_nancymaae
ENSCGRG00000002085	Htatsf1	99	59.807	ENSBTAG00000032711	HTATSF1	73	65.487	Bos_taurus
ENSCGRG00000002085	Htatsf1	99	68.741	ENSBTAG00000055212	HTATSF1	91	68.690	Bos_taurus
ENSCGRG00000002085	Htatsf1	99	68.741	ENSBTAG00000054942	HTATSF1	91	68.690	Bos_taurus
ENSCGRG00000002085	Htatsf1	99	67.036	ENSCJAG00000003676	HTATSF1	73	68.728	Callithrix_jacchus
ENSCGRG00000002085	Htatsf1	99	69.018	ENSCAFG00000023294	HTATSF1	74	72.759	Canis_familiaris
ENSCGRG00000002085	Htatsf1	99	69.018	ENSCAFG00020024635	HTATSF1	74	72.759	Canis_lupus_dingo
ENSCGRG00000002085	Htatsf1	99	68.188	ENSCHIG00000000312	HTATSF1	91	67.906	Capra_hircus
ENSCGRG00000002085	Htatsf1	99	69.499	ENSTSYG00000028876	HTATSF1	91	69.986	Carlito_syrichta
ENSCGRG00000002085	Htatsf1	99	63.978	ENSCCAG00000025329	-	90	67.788	Cebus_capucinus
ENSCGRG00000002085	Htatsf1	99	67.684	ENSCCAG00000022701	-	73	69.381	Cebus_capucinus
ENSCGRG00000002085	Htatsf1	99	68.392	ENSCATG00000029963	HTATSF1	73	70.442	Cercocebus_atys
ENSCGRG00000002085	Htatsf1	99	65.512	ENSCLAG00000002718	HTATSF1	72	68.739	Chinchilla_lanigera
ENSCGRG00000002085	Htatsf1	99	68.531	ENSCSAG00000007505	HTATSF1	73	70.619	Chlorocebus_sabaeus
ENSCGRG00000002085	Htatsf1	99	68.531	ENSCANG00000028495	HTATSF1	73	70.619	Colobus_angolensis_palliatus
ENSCGRG00000002085	Htatsf1	100	94.282	ENSCGRG00001021602	Htatsf1	92	94.282	Cricetulus_griseus_chok1gshd
ENSCGRG00000002085	Htatsf1	99	66.066	ENSDNOG00000002254	HTATSF1	73	70.123	Dasypus_novemcinctus
ENSCGRG00000002085	Htatsf1	60	42.308	ENSETEG00000006377	-	56	43.415	Echinops_telfairi
ENSCGRG00000002085	Htatsf1	79	69.792	ENSEASG00005003440	HTATSF1	73	69.947	Equus_asinus_asinus
ENSCGRG00000002085	Htatsf1	79	69.792	ENSECAG00000009156	HTATSF1	73	69.947	Equus_caballus
ENSCGRG00000002085	Htatsf1	99	56.768	ENSEEUG00000010668	HTATSF1	72	59.821	Erinaceus_europaeus
ENSCGRG00000002085	Htatsf1	99	69.008	ENSFCAG00000031924	HTATSF1	74	72.887	Felis_catus
ENSCGRG00000002085	Htatsf1	99	65.211	ENSFDAG00000008617	HTATSF1	73	69.449	Fukomys_damarensis
ENSCGRG00000002085	Htatsf1	99	68.619	ENSGGOG00000026072	HTATSF1	73	70.619	Gorilla_gorilla
ENSCGRG00000002085	Htatsf1	98	65.395	ENSHGLG00000005328	HTATSF1	73	67.549	Heterocephalus_glaber_female
ENSCGRG00000002085	Htatsf1	99	69.958	ENSSTOG00000012505	HTATSF1	73	73.063	Ictidomys_tridecemlineatus
ENSCGRG00000002085	Htatsf1	99	57.858	ENSLAFG00000014307	HTATSF1	80	65.079	Loxodonta_africana
ENSCGRG00000002085	Htatsf1	99	68.531	ENSMFAG00000044705	HTATSF1	73	70.619	Macaca_fascicularis
ENSCGRG00000002085	Htatsf1	99	68.252	ENSMMUG00000006450	HTATSF1	73	70.442	Macaca_mulatta
ENSCGRG00000002085	Htatsf1	99	62.412	ENSMNEG00000024084	HTATSF1	76	63.734	Macaca_nemestrina
ENSCGRG00000002085	Htatsf1	99	68.252	ENSMLEG00000035511	HTATSF1	73	70.442	Mandrillus_leucophaeus
ENSCGRG00000002085	Htatsf1	100	82.148	ENSMAUG00000007235	Htatsf1	92	80.893	Mesocricetus_auratus
ENSCGRG00000002085	Htatsf1	99	68.370	ENSMICG00000009348	HTATSF1	75	71.880	Microcebus_murinus
ENSCGRG00000002085	Htatsf1	100	74.079	ENSMOCG00000023007	-	92	71.623	Microtus_ochrogaster
ENSCGRG00000002085	Htatsf1	99	72.152	ENSMOCG00000022370	-	71	74.286	Microtus_ochrogaster
ENSCGRG00000002085	Htatsf1	99	73.883	MGP_CAROLIEiJ_G0033094	Htatsf1	91	73.955	Mus_caroli
ENSCGRG00000002085	Htatsf1	98	74.680	ENSMUSG00000067873	Htatsf1	91	75.000	Mus_musculus
ENSCGRG00000002085	Htatsf1	98	74.538	MGP_SPRETEiJ_G0034249	Htatsf1	91	74.860	Mus_spretus
ENSCGRG00000002085	Htatsf1	99	67.308	ENSMPUG00000001901	HTATSF1	74	71.053	Mustela_putorius_furo
ENSCGRG00000002085	Htatsf1	99	63.128	ENSMLUG00000028418	-	73	66.135	Myotis_lucifugus
ENSCGRG00000002085	Htatsf1	99	58.626	ENSMLUG00000009234	-	73	62.766	Myotis_lucifugus
ENSCGRG00000002085	Htatsf1	98	71.307	ENSNGAG00000017831	Htatsf1	73	72.647	Nannospalax_galili
ENSCGRG00000002085	Htatsf1	99	68.480	ENSNLEG00000002746	HTATSF1	73	70.619	Nomascus_leucogenys
ENSCGRG00000002085	Htatsf1	100	67.310	ENSOCUG00000012570	HTATSF1	73	70.877	Oryctolagus_cuniculus
ENSCGRG00000002085	Htatsf1	98	65.498	ENSOGAG00000005565	HTATSF1	72	70.213	Otolemur_garnettii
ENSCGRG00000002085	Htatsf1	99	68.188	ENSOARG00000011215	-	91	68.138	Ovis_aries
ENSCGRG00000002085	Htatsf1	99	63.961	ENSOARG00000000481	-	73	66.549	Ovis_aries
ENSCGRG00000002085	Htatsf1	99	68.759	ENSPPAG00000024268	HTATSF1	73	70.796	Pan_paniscus
ENSCGRG00000002085	Htatsf1	99	67.541	ENSPPRG00000014209	HTATSF1	73	71.378	Panthera_pardus
ENSCGRG00000002085	Htatsf1	99	67.403	ENSPTIG00000016887	HTATSF1	76	71.025	Panthera_tigris_altaica
ENSCGRG00000002085	Htatsf1	99	68.759	ENSPTRG00000044591	HTATSF1	73	70.796	Pan_troglodytes
ENSCGRG00000002085	Htatsf1	85	70.826	ENSPANG00000010946	HTATSF1	61	74.041	Papio_anubis
ENSCGRG00000002085	Htatsf1	98	77.240	ENSPEMG00000022397	Htatsf1	91	76.503	Peromyscus_maniculatus_bairdii
ENSCGRG00000002085	Htatsf1	79	70.280	ENSPPYG00000020765	HTATSF1	73	70.265	Pongo_abelii
ENSCGRG00000002085	Htatsf1	93	56.138	ENSPCAG00000010576	HTATSF1	74	57.092	Procavia_capensis
ENSCGRG00000002085	Htatsf1	99	68.975	ENSPCOG00000021823	HTATSF1	73	72.212	Propithecus_coquereli
ENSCGRG00000002085	Htatsf1	99	61.399	ENSPVAG00000010281	HTATSF1	78	62.057	Pteropus_vampyrus
ENSCGRG00000002085	Htatsf1	99	77.855	ENSRNOG00000027761	Htatsf1	91	77.855	Rattus_norvegicus
ENSCGRG00000002085	Htatsf1	99	65.312	ENSRBIG00000035486	HTATSF1	71	65.863	Rhinopithecus_bieti
ENSCGRG00000002085	Htatsf1	99	68.112	ENSRROG00000021939	HTATSF1	73	70.265	Rhinopithecus_roxellana
ENSCGRG00000002085	Htatsf1	99	65.833	ENSSBOG00000017914	-	74	66.903	Saimiri_boliviensis_boliviensis
ENSCGRG00000002085	Htatsf1	99	66.434	ENSSBOG00000027186	-	73	69.558	Saimiri_boliviensis_boliviensis
ENSCGRG00000002085	Htatsf1	99	53.333	ENSSARG00000005193	HTATSF1	74	59.717	Sorex_araneus
ENSCGRG00000002085	Htatsf1	99	59.778	ENSSSCG00000023062	HTATSF1	91	60.385	Sus_scrofa
ENSCGRG00000002085	Htatsf1	86	58.293	ENSTTRG00000002269	HTATSF1	82	59.206	Tursiops_truncatus
ENSCGRG00000002085	Htatsf1	99	68.603	ENSUAMG00000012048	HTATSF1	74	71.958	Ursus_americanus
ENSCGRG00000002085	Htatsf1	99	69.284	ENSUMAG00000010393	HTATSF1	74	72.632	Ursus_maritimus
ENSCGRG00000002085	Htatsf1	99	62.083	ENSVPAG00000004569	HTATSF1	99	62.293	Vicugna_pacos
ENSCGRG00000002085	Htatsf1	99	68.880	ENSVVUG00000024802	HTATSF1	74	72.583	Vulpes_vulpes