EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000002225 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cold shock domain containing E1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 10171 bases
Position: chrJH000613.1:1736-11906
Accession: 100760894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000003041	CSD	PF00313.22	1.2e-48	1	3
ENSCGRP00000003041	CSD	PF00313.22	1.2e-48	2	3
ENSCGRP00000003041	CSD	PF00313.22	1.2e-48	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000003107	-	1350	XM_003505819	ENSCGRP00000003041	449 (aa)	XP_003505867	UPI0004542D3D

Gene Model

Click here to download ENSCGRG00000002225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000002225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000002225	-	100	84.598	ENSCGRG00000005831	-	96	84.598

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000002225	-	100	98.441	ENSG00000009307	CSDE1	99	98.441	Homo_sapiens
ENSCGRG00000002225	-	100	73.778	ENSAPOG00000015538	csde1	97	73.510	Acanthochromis_polyacanthus
ENSCGRG00000002225	-	100	97.105	ENSAMEG00000017129	CSDE1	91	97.105	Ailuropoda_melanoleuca
ENSCGRG00000002225	-	89	71.622	ENSACIG00000015175	csde1	99	71.622	Amphilophus_citrinellus
ENSCGRG00000002225	-	100	73.778	ENSAOCG00000011510	csde1	96	73.778	Amphiprion_ocellaris
ENSCGRG00000002225	-	100	73.778	ENSAPEG00000007194	csde1	97	73.778	Amphiprion_percula
ENSCGRG00000002225	-	100	72.889	ENSATEG00000003864	csde1	96	72.889	Anabas_testudineus
ENSCGRG00000002225	-	100	87.528	ENSAPLG00000008797	CSDE1	96	87.528	Anas_platyrhynchos
ENSCGRG00000002225	-	100	88.196	ENSACAG00000003120	CSDE1	97	88.196	Anolis_carolinensis
ENSCGRG00000002225	-	100	97.996	ENSANAG00000024665	CSDE1	92	97.996	Aotus_nancymaae
ENSCGRG00000002225	-	80	91.045	ENSANAG00000028396	-	90	91.045	Aotus_nancymaae
ENSCGRG00000002225	-	100	73.111	ENSACLG00000013296	csde1	97	73.111	Astatotilapia_calliptera
ENSCGRG00000002225	-	100	72.284	ENSAMXG00000007436	csde1	97	72.284	Astyanax_mexicanus
ENSCGRG00000002225	-	100	98.441	ENSBTAG00000000678	CSDE1	96	98.441	Bos_taurus
ENSCGRG00000002225	-	100	97.996	ENSCJAG00000012565	CSDE1	94	97.722	Callithrix_jacchus
ENSCGRG00000002225	-	97	98.157	ENSCAFG00000009618	CSDE1	91	98.157	Canis_familiaris
ENSCGRG00000002225	-	100	98.218	ENSCAFG00020000481	CSDE1	96	98.218	Canis_lupus_dingo
ENSCGRG00000002225	-	100	98.441	ENSCHIG00000017250	CSDE1	96	98.441	Capra_hircus
ENSCGRG00000002225	-	100	98.218	ENSTSYG00000003747	CSDE1	100	98.218	Carlito_syrichta
ENSCGRG00000002225	-	100	78.174	ENSCAPG00000015128	CSDE1	96	78.174	Cavia_aperea
ENSCGRG00000002225	-	100	97.996	ENSCPOG00000040388	CSDE1	97	97.996	Cavia_porcellus
ENSCGRG00000002225	-	96	75.990	ENSCCAG00000033677	-	99	75.772	Cebus_capucinus
ENSCGRG00000002225	-	100	73.497	ENSCCAG00000030878	-	91	73.497	Cebus_capucinus
ENSCGRG00000002225	-	100	97.996	ENSCCAG00000036794	CSDE1	100	97.996	Cebus_capucinus
ENSCGRG00000002225	-	100	98.575	ENSCATG00000036962	CSDE1	98	98.575	Cercocebus_atys
ENSCGRG00000002225	-	100	97.996	ENSCLAG00000006618	CSDE1	97	97.996	Chinchilla_lanigera
ENSCGRG00000002225	-	100	98.441	ENSCSAG00000001658	CSDE1	92	98.441	Chlorocebus_sabaeus
ENSCGRG00000002225	-	100	98.611	ENSCHOG00000000918	CSDE1	69	98.611	Choloepus_hoffmanni
ENSCGRG00000002225	-	100	88.196	ENSCPBG00000016547	CSDE1	97	88.196	Chrysemys_picta_bellii
ENSCGRG00000002225	-	98	41.026	ENSCING00000014465	-	96	41.026	Ciona_intestinalis
ENSCGRG00000002225	-	96	40.529	ENSCSAVG00000008100	-	99	40.132	Ciona_savignyi
ENSCGRG00000002225	-	100	90.244	ENSCANG00000031069	-	99	90.244	Colobus_angolensis_palliatus
ENSCGRG00000002225	-	100	98.575	ENSCANG00000035096	CSDE1	98	98.575	Colobus_angolensis_palliatus
ENSCGRG00000002225	-	100	100.000	ENSCGRG00001016833	-	97	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000002225	-	100	84.598	ENSCGRG00001014011	-	96	84.598	Cricetulus_griseus_chok1gshd
ENSCGRG00000002225	-	100	73.111	ENSCSEG00000002620	csde1	96	73.111	Cynoglossus_semilaevis
ENSCGRG00000002225	-	100	72.000	ENSCVAG00000001344	csde1	97	71.586	Cyprinodon_variegatus
ENSCGRG00000002225	-	100	74.222	ENSDARG00000074758	csde1	97	74.222	Danio_rerio
ENSCGRG00000002225	-	100	97.550	ENSDNOG00000010287	-	90	97.550	Dasypus_novemcinctus
ENSCGRG00000002225	-	55	69.582	ENSDNOG00000034464	-	79	69.582	Dasypus_novemcinctus
ENSCGRG00000002225	-	100	97.996	ENSDORG00000011609	Csde1	99	97.996	Dipodomys_ordii
ENSCGRG00000002225	-	96	45.725	FBgn0263352	Unr	72	45.725	Drosophila_melanogaster
ENSCGRG00000002225	-	99	66.741	ENSETEG00000007109	-	99	66.741	Echinops_telfairi
ENSCGRG00000002225	-	100	73.942	ENSETEG00000013678	-	96	73.942	Echinops_telfairi
ENSCGRG00000002225	-	83	80.892	ENSETEG00000006280	-	96	80.892	Echinops_telfairi
ENSCGRG00000002225	-	99	55.240	ENSEBUG00000008647	csde1	97	52.273	Eptatretus_burgeri
ENSCGRG00000002225	-	100	98.441	ENSEASG00005006284	CSDE1	97	98.441	Equus_asinus_asinus
ENSCGRG00000002225	-	100	98.441	ENSECAG00000020885	CSDE1	97	98.441	Equus_caballus
ENSCGRG00000002225	-	86	97.906	ENSEEUG00000006286	CSDE1	62	97.906	Erinaceus_europaeus
ENSCGRG00000002225	-	100	72.284	ENSELUG00000015507	csde1	96	72.284	Esox_lucius
ENSCGRG00000002225	-	100	98.664	ENSFCAG00000029266	CSDE1	96	98.664	Felis_catus
ENSCGRG00000002225	-	100	87.305	ENSFALG00000003407	CSDE1	97	87.305	Ficedula_albicollis
ENSCGRG00000002225	-	100	97.773	ENSFDAG00000007882	CSDE1	99	97.773	Fukomys_damarensis
ENSCGRG00000002225	-	100	72.222	ENSFHEG00000010799	csde1	97	72.222	Fundulus_heteroclitus
ENSCGRG00000002225	-	99	73.274	ENSGMOG00000012731	csde1	97	73.274	Gadus_morhua
ENSCGRG00000002225	-	96	87.298	ENSGALG00000002139	CSDE1	96	87.298	Gallus_gallus
ENSCGRG00000002225	-	87	69.345	ENSGAFG00000005241	csde1	91	69.345	Gambusia_affinis
ENSCGRG00000002225	-	99	73.719	ENSGACG00000004544	csde1	97	73.719	Gasterosteus_aculeatus
ENSCGRG00000002225	-	100	87.751	ENSGAGG00000017685	CSDE1	97	87.751	Gopherus_agassizii
ENSCGRG00000002225	-	100	98.441	ENSGGOG00000002164	CSDE1	96	98.441	Gorilla_gorilla
ENSCGRG00000002225	-	100	73.111	ENSHBUG00000020315	csde1	96	73.111	Haplochromis_burtoni
ENSCGRG00000002225	-	100	89.310	ENSHGLG00000010039	-	100	89.310	Heterocephalus_glaber_female
ENSCGRG00000002225	-	100	81.960	ENSHGLG00000019549	-	97	81.960	Heterocephalus_glaber_female
ENSCGRG00000002225	-	99	84.199	ENSHGLG00000007471	-	95	84.199	Heterocephalus_glaber_female
ENSCGRG00000002225	-	100	81.069	ENSHGLG00000009620	-	97	81.514	Heterocephalus_glaber_female
ENSCGRG00000002225	-	99	79.018	ENSHGLG00000000650	-	97	79.018	Heterocephalus_glaber_female
ENSCGRG00000002225	-	100	88.196	ENSHGLG00000003829	-	96	88.196	Heterocephalus_glaber_female
ENSCGRG00000002225	-	100	89.087	ENSHGLG00000008555	-	99	89.087	Heterocephalus_glaber_female
ENSCGRG00000002225	-	100	85.078	ENSHGLG00100012072	-	98	85.078	Heterocephalus_glaber_male
ENSCGRG00000002225	-	99	78.571	ENSHGLG00100002245	-	97	78.571	Heterocephalus_glaber_male
ENSCGRG00000002225	-	100	89.087	ENSHGLG00100006910	-	100	89.087	Heterocephalus_glaber_male
ENSCGRG00000002225	-	89	87.469	ENSHGLG00100004195	-	96	87.469	Heterocephalus_glaber_male
ENSCGRG00000002225	-	100	98.218	ENSHGLG00100019438	-	97	98.218	Heterocephalus_glaber_male
ENSCGRG00000002225	-	99	79.910	ENSHGLG00100007287	-	94	79.910	Heterocephalus_glaber_male
ENSCGRG00000002225	-	100	81.960	ENSHGLG00100004833	-	100	81.960	Heterocephalus_glaber_male
ENSCGRG00000002225	-	100	81.960	ENSHGLG00100001846	-	97	81.960	Heterocephalus_glaber_male
ENSCGRG00000002225	-	100	72.222	ENSHCOG00000004158	csde1	97	72.222	Hippocampus_comes
ENSCGRG00000002225	-	100	73.171	ENSIPUG00000000355	csde1	97	73.171	Ictalurus_punctatus
ENSCGRG00000002225	-	100	83.073	ENSSTOG00000030994	-	95	83.073	Ictidomys_tridecemlineatus
ENSCGRG00000002225	-	86	82.993	ENSSTOG00000032722	-	94	82.993	Ictidomys_tridecemlineatus
ENSCGRG00000002225	-	100	98.441	ENSJJAG00000019571	Csde1	99	98.441	Jaculus_jaculus
ENSCGRG00000002225	-	100	72.907	ENSKMAG00000005685	csde1	97	72.489	Kryptolebias_marmoratus
ENSCGRG00000002225	-	100	73.778	ENSLBEG00000014770	csde1	97	73.778	Labrus_bergylta
ENSCGRG00000002225	-	100	72.149	ENSLACG00000018452	CSDE1	91	72.149	Latimeria_chalumnae
ENSCGRG00000002225	-	100	75.724	ENSLOCG00000010413	csde1	91	75.724	Lepisosteus_oculatus
ENSCGRG00000002225	-	100	95.991	ENSLAFG00000007150	CSDE1	93	95.991	Loxodonta_africana
ENSCGRG00000002225	-	100	98.575	ENSMFAG00000003674	CSDE1	98	98.575	Macaca_fascicularis
ENSCGRG00000002225	-	100	98.441	ENSMMUG00000001974	CSDE1	96	98.458	Macaca_mulatta
ENSCGRG00000002225	-	100	98.575	ENSMNEG00000045247	CSDE1	98	98.575	Macaca_nemestrina
ENSCGRG00000002225	-	100	97.996	ENSMLEG00000038673	CSDE1	92	97.996	Mandrillus_leucophaeus
ENSCGRG00000002225	-	100	74.444	ENSMAMG00000008821	csde1	96	74.444	Mastacembelus_armatus
ENSCGRG00000002225	-	100	73.111	ENSMZEG00005021675	csde1	96	73.111	Maylandia_zebra
ENSCGRG00000002225	-	100	87.111	ENSMGAG00000016381	CSDE1	96	87.111	Meleagris_gallopavo
ENSCGRG00000002225	-	100	100.000	ENSMAUG00000014031	Csde1	99	100.000	Mesocricetus_auratus
ENSCGRG00000002225	-	100	98.218	ENSMICG00000002050	CSDE1	99	98.214	Microcebus_murinus
ENSCGRG00000002225	-	100	99.555	ENSMOCG00000018960	Csde1	97	99.555	Microtus_ochrogaster
ENSCGRG00000002225	-	100	73.556	ENSMMOG00000015075	csde1	96	73.556	Mola_mola
ENSCGRG00000002225	-	100	94.878	ENSMODG00000004685	CSDE1	97	94.878	Monodelphis_domestica
ENSCGRG00000002225	-	100	73.556	ENSMALG00000007132	csde1	96	73.556	Monopterus_albus
ENSCGRG00000002225	-	100	99.555	MGP_CAROLIEiJ_G0025444	Csde1	97	99.555	Mus_caroli
ENSCGRG00000002225	-	100	99.332	ENSMUSG00000068823	Csde1	99	99.332	Mus_musculus
ENSCGRG00000002225	-	100	99.777	MGP_PahariEiJ_G0026888	Csde1	97	99.777	Mus_pahari
ENSCGRG00000002225	-	100	99.777	MGP_SPRETEiJ_G0026394	Csde1	97	99.777	Mus_spretus
ENSCGRG00000002225	-	97	98.618	ENSMPUG00000005753	CSDE1	96	98.618	Mustela_putorius_furo
ENSCGRG00000002225	-	100	97.996	ENSMLUG00000005681	CSDE1	91	97.996	Myotis_lucifugus
ENSCGRG00000002225	-	100	71.047	ENSNGAG00000012599	-	100	71.047	Nannospalax_galili
ENSCGRG00000002225	-	100	98.886	ENSNGAG00000021929	Csde1	99	98.886	Nannospalax_galili
ENSCGRG00000002225	-	100	73.111	ENSNBRG00000020808	csde1	96	73.111	Neolamprologus_brichardi
ENSCGRG00000002225	-	100	98.218	ENSNLEG00000004842	CSDE1	94	98.218	Nomascus_leucogenys
ENSCGRG00000002225	-	97	94.931	ENSMEUG00000002677	CSDE1	80	94.931	Notamacropus_eugenii
ENSCGRG00000002225	-	97	92.857	ENSOPRG00000005002	CSDE1	61	92.857	Ochotona_princeps
ENSCGRG00000002225	-	100	97.550	ENSODEG00000007383	-	99	97.550	Octodon_degus
ENSCGRG00000002225	-	100	67.699	ENSODEG00000005979	-	98	67.699	Octodon_degus
ENSCGRG00000002225	-	100	73.111	ENSONIG00000009309	csde1	97	73.111	Oreochromis_niloticus
ENSCGRG00000002225	-	100	66.004	ENSOANG00000003346	-	97	66.004	Ornithorhynchus_anatinus
ENSCGRG00000002225	-	100	97.996	ENSOCUG00000016438	CSDE1	92	97.996	Oryctolagus_cuniculus
ENSCGRG00000002225	-	100	73.778	ENSORLG00000000707	csde1	97	73.556	Oryzias_latipes
ENSCGRG00000002225	-	100	73.556	ENSORLG00020005148	csde1	97	73.556	Oryzias_latipes_hni
ENSCGRG00000002225	-	100	73.778	ENSORLG00015019415	csde1	97	73.556	Oryzias_latipes_hsok
ENSCGRG00000002225	-	100	74.444	ENSOMEG00000015656	csde1	97	74.222	Oryzias_melastigma
ENSCGRG00000002225	-	100	98.441	ENSOGAG00000012127	CSDE1	91	98.441	Otolemur_garnettii
ENSCGRG00000002225	-	100	98.664	ENSOARG00000020034	CSDE1	91	98.664	Ovis_aries
ENSCGRG00000002225	-	100	98.441	ENSPPAG00000025861	CSDE1	96	98.441	Pan_paniscus
ENSCGRG00000002225	-	100	98.664	ENSPPRG00000006747	CSDE1	91	98.664	Panthera_pardus
ENSCGRG00000002225	-	100	98.664	ENSPTIG00000015468	CSDE1	97	98.664	Panthera_tigris_altaica
ENSCGRG00000002225	-	100	98.441	ENSPTRG00000033721	CSDE1	97	98.441	Pan_troglodytes
ENSCGRG00000002225	-	100	98.441	ENSPANG00000018873	CSDE1	96	98.441	Papio_anubis
ENSCGRG00000002225	-	100	73.942	ENSPKIG00000009459	csde1	97	73.942	Paramormyrops_kingsleyae
ENSCGRG00000002225	-	93	89.320	ENSPSIG00000003823	CSDE1	91	89.320	Pelodiscus_sinensis
ENSCGRG00000002225	-	100	73.392	ENSPMGG00000000772	csde1	96	73.392	Periophthalmus_magnuspinnatus
ENSCGRG00000002225	-	100	99.777	ENSPEMG00000020357	-	99	99.777	Peromyscus_maniculatus_bairdii
ENSCGRG00000002225	-	100	95.100	ENSPCIG00000022587	CSDE1	97	95.100	Phascolarctos_cinereus
ENSCGRG00000002225	-	100	71.145	ENSPFOG00000012664	csde1	97	71.461	Poecilia_formosa
ENSCGRG00000002225	-	96	72.581	ENSPLAG00000017680	csde1	93	72.581	Poecilia_latipinna
ENSCGRG00000002225	-	98	72.398	ENSPMEG00000005094	csde1	96	72.398	Poecilia_mexicana
ENSCGRG00000002225	-	100	70.925	ENSPREG00000011631	csde1	97	70.410	Poecilia_reticulata
ENSCGRG00000002225	-	100	98.441	ENSPPYG00000000996	CSDE1	97	98.441	Pongo_abelii
ENSCGRG00000002225	-	100	97.327	ENSPCAG00000014368	CSDE1	76	97.327	Procavia_capensis
ENSCGRG00000002225	-	84	84.000	ENSPCOG00000008223	-	86	84.000	Propithecus_coquereli
ENSCGRG00000002225	-	100	98.664	ENSPCOG00000017893	CSDE1	97	98.664	Propithecus_coquereli
ENSCGRG00000002225	-	100	88.419	ENSPVAG00000008225	CSDE1	91	88.419	Pteropus_vampyrus
ENSCGRG00000002225	-	100	73.111	ENSPNYG00000013745	csde1	96	73.111	Pundamilia_nyererei
ENSCGRG00000002225	-	100	73.171	ENSPNAG00000001958	csde1	97	73.171	Pygocentrus_nattereri
ENSCGRG00000002225	-	100	99.777	ENSRNOG00000061058	Csde1	97	99.777	Rattus_norvegicus
ENSCGRG00000002225	-	100	88.692	ENSRBIG00000038966	-	92	88.000	Rhinopithecus_bieti
ENSCGRG00000002225	-	100	97.105	ENSRBIG00000038088	-	99	97.105	Rhinopithecus_bieti
ENSCGRG00000002225	-	100	98.441	ENSRROG00000043101	CSDE1	98	98.341	Rhinopithecus_roxellana
ENSCGRG00000002225	-	100	97.996	ENSSBOG00000035592	CSDE1	92	97.996	Saimiri_boliviensis_boliviensis
ENSCGRG00000002225	-	100	94.878	ENSSHAG00000009831	CSDE1	96	94.878	Sarcophilus_harrisii
ENSCGRG00000002225	-	100	74.000	ENSSFOG00015007498	csde1	97	73.568	Scleropages_formosus
ENSCGRG00000002225	-	100	74.667	ENSSMAG00000007203	csde1	97	74.667	Scophthalmus_maximus
ENSCGRG00000002225	-	100	73.778	ENSSDUG00000015380	csde1	96	73.778	Seriola_dumerili
ENSCGRG00000002225	-	100	73.778	ENSSLDG00000008819	csde1	97	73.778	Seriola_lalandi_dorsalis
ENSCGRG00000002225	-	100	96.659	ENSSARG00000000738	CSDE1	91	96.659	Sorex_araneus
ENSCGRG00000002225	-	100	86.637	ENSSPUG00000008714	CSDE1	97	86.637	Sphenodon_punctatus
ENSCGRG00000002225	-	100	72.889	ENSSPAG00000000716	csde1	96	72.889	Stegastes_partitus
ENSCGRG00000002225	-	100	98.441	ENSSSCG00000006752	CSDE1	96	98.441	Sus_scrofa
ENSCGRG00000002225	-	99	85.938	ENSTGUG00000000972	CSDE1	97	85.938	Taeniopygia_guttata
ENSCGRG00000002225	-	100	69.265	ENSTRUG00000007996	csde1	96	69.265	Takifugu_rubripes
ENSCGRG00000002225	-	87	33.188	ENSTNIG00000010878	csde1	86	33.188	Tetraodon_nigroviridis
ENSCGRG00000002225	-	100	97.773	ENSTTRG00000015583	CSDE1	91	97.773	Tursiops_truncatus
ENSCGRG00000002225	-	89	100.000	ENSUAMG00000021779	-	97	100.000	Ursus_americanus
ENSCGRG00000002225	-	83	92.562	ENSUAMG00000024289	-	92	92.562	Ursus_americanus
ENSCGRG00000002225	-	100	98.575	ENSUMAG00000011714	-	99	98.575	Ursus_maritimus
ENSCGRG00000002225	-	100	90.200	ENSUMAG00000009720	-	85	90.200	Ursus_maritimus
ENSCGRG00000002225	-	100	99.091	ENSVPAG00000000749	CSDE1	76	99.091	Vicugna_pacos
ENSCGRG00000002225	-	83	97.910	ENSVVUG00000009890	CSDE1	90	97.910	Vulpes_vulpes
ENSCGRG00000002225	-	100	79.823	ENSXETG00000021448	csde1	97	79.823	Xenopus_tropicalis
ENSCGRG00000002225	-	87	85.455	ENSXCOG00000000035	csde1	80	85.455	Xiphophorus_couchianus
ENSCGRG00000002225	-	100	72.889	ENSXMAG00000009080	csde1	97	72.467	Xiphophorus_maculatus