EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00000002730 (Gene tree)
Gene ID: -
Gene Symbol: Zfp39
Alias: CTfin33|Zfp-39
Full Name: zinc finger protein 39
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Minus strand
Length: 17785 bases
Position: chrJH000381.1:131682-149466
Accession: 100762136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	1	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	2	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	3	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	4	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	5	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	6	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	7	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	8	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	9	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	10	11
ENSCGRP00000003697	zf-C2H2	PF00096.26	7.5e-52	11	11
ENSCGRP00000003697	zf-met	PF12874.7	3e-11	1	2
ENSCGRP00000003697	zf-met	PF12874.7	3e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000003776	-	3777	XM_007615074	ENSCGRP00000003697	716 (aa)	XP_007613264	-

Gene Model

Click here to download ENSCGRG00000002730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000002730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00000002730	Zfp39	73	35.220	ENSCGRG00000016739	Zfp423	98	35.220
ENSCGRG00000002730	Zfp39	92	56.075	ENSCGRG00000008922	2610008E11Rik	95	56.075
ENSCGRG00000002730	Zfp39	58	37.956	ENSCGRG00000012119	Snai2	51	37.956
ENSCGRG00000002730	Zfp39	92	44.225	ENSCGRG00000018332	Zfp53	93	44.225
ENSCGRG00000002730	Zfp39	91	47.518	ENSCGRG00000010436	-	88	47.518
ENSCGRG00000002730	Zfp39	68	47.722	ENSCGRG00000000280	-	88	47.722
ENSCGRG00000002730	Zfp39	59	36.908	ENSCGRG00000010996	-	74	36.908
ENSCGRG00000002730	Zfp39	57	44.030	ENSCGRG00000013485	-	100	44.030
ENSCGRG00000002730	Zfp39	91	49.524	ENSCGRG00000004206	-	100	49.524
ENSCGRG00000002730	Zfp39	64	54.671	ENSCGRG00000015327	Zfp112	60	54.671
ENSCGRG00000002730	Zfp39	91	41.398	ENSCGRG00000012088	Zfp560	87	41.398
ENSCGRG00000002730	Zfp39	91	44.794	ENSCGRG00000015037	Zfp354a	98	44.794
ENSCGRG00000002730	Zfp39	59	38.519	ENSCGRG00000014932	Snai3	50	38.519
ENSCGRG00000002730	Zfp39	58	42.697	ENSCGRG00000004814	Patz1	54	35.714
ENSCGRG00000002730	Zfp39	64	51.466	ENSCGRG00000017528	Zfp94	78	51.466
ENSCGRG00000002730	Zfp39	88	45.694	ENSCGRG00000016421	-	78	45.694
ENSCGRG00000002730	Zfp39	88	53.710	ENSCGRG00000008531	-	98	53.710
ENSCGRG00000002730	Zfp39	57	37.594	ENSCGRG00000014850	-	92	37.594
ENSCGRG00000002730	Zfp39	91	53.101	ENSCGRG00000008411	Gm3854	96	53.101
ENSCGRG00000002730	Zfp39	92	49.856	ENSCGRG00000000778	-	99	46.588
ENSCGRG00000002730	Zfp39	93	43.326	ENSCGRG00000000632	-	99	50.679
ENSCGRG00000002730	Zfp39	62	45.221	ENSCGRG00000001582	Zkscan3	52	45.415
ENSCGRG00000002730	Zfp39	61	60.976	ENSCGRG00000013919	Zfp709	88	60.976
ENSCGRG00000002730	Zfp39	59	51.079	ENSCGRG00000006987	Zfp768	57	50.340
ENSCGRG00000002730	Zfp39	64	34.426	ENSCGRG00000015472	Repin1	84	35.698
ENSCGRG00000002730	Zfp39	92	50.649	ENSCGRG00000009742	-	94	50.649
ENSCGRG00000002730	Zfp39	92	56.379	ENSCGRG00000016788	-	99	56.379
ENSCGRG00000002730	Zfp39	60	35.897	ENSCGRG00000014598	Zfp319	91	34.318
ENSCGRG00000002730	Zfp39	72	54.167	ENSCGRG00000014813	Zfp454	83	54.167
ENSCGRG00000002730	Zfp39	74	47.170	ENSCGRG00000013626	Zfp715	81	47.170
ENSCGRG00000002730	Zfp39	65	51.327	ENSCGRG00000015809	-	59	58.974
ENSCGRG00000002730	Zfp39	62	48.961	ENSCGRG00000015629	-	58	48.961
ENSCGRG00000002730	Zfp39	92	49.508	ENSCGRG00000000411	-	99	49.508
ENSCGRG00000002730	Zfp39	92	43.496	ENSCGRG00000009095	Zfp202	63	43.496
ENSCGRG00000002730	Zfp39	60	47.222	ENSCGRG00000009462	Zfp236	65	46.364
ENSCGRG00000002730	Zfp39	66	32.143	ENSCGRG00000012333	Zfp574	88	31.006
ENSCGRG00000002730	Zfp39	57	41.406	ENSCGRG00000008703	Wt1	55	40.458

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000002730	Zfp39	92	60.030	ENSCPOG00000036704	-	99	60.030	Cavia_porcellus
ENSCGRG00000002730	Zfp39	100	99.721	ENSCGRG00001002406	Zfp39	100	99.721	Cricetulus_griseus_chok1gshd
ENSCGRG00000002730	Zfp39	99	72.175	ENSJJAG00000018925	Zfp39	99	72.175	Jaculus_jaculus
ENSCGRG00000002730	Zfp39	99	93.079	ENSMAUG00000001536	Zfp39	99	93.079	Mesocricetus_auratus
ENSCGRG00000002730	Zfp39	99	83.077	ENSMOCG00000017961	Zfp39	99	83.077	Microtus_ochrogaster
ENSCGRG00000002730	Zfp39	100	81.006	MGP_PahariEiJ_G0017548	Zfp39	99	81.006	Mus_pahari
ENSCGRG00000002730	Zfp39	100	70.851	ENSNGAG00000019853	Zfp39	99	70.851	Nannospalax_galili
ENSCGRG00000002730	Zfp39	59	79.333	ENSODEG00000000805	-	100	79.333	Octodon_degus
ENSCGRG00000002730	Zfp39	99	89.045	ENSPEMG00000009428	Zfp39	99	89.045	Peromyscus_maniculatus_bairdii
ENSCGRG00000002730	Zfp39	100	79.190	ENSRNOG00000014712	Zfp39	99	79.190	Rattus_norvegicus