EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000002972 (Gene tree)
Gene ID: -
Gene Symbol: Prpf38b
Alias: 1110021E09Rik
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 5863 bases
Position: chrJH003406.1:43225-49087
Accession: 100752495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000004034	PRP38	PF03371.15	6.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000004115	-	2510	XM_016963691	ENSCGRP00000004034	452 (aa)	XP_016819180	-

Gene Model

Click here to download ENSCGRG00000002972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000002972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000002972	Prpf38b	100	92.291	ENSG00000134186	PRPF38B	97	91.924	Homo_sapiens
ENSCGRG00000002972	Prpf38b	100	90.308	ENSANAG00000028333	PRPF38B	83	92.511	Aotus_nancymaae
ENSCGRG00000002972	Prpf38b	100	100.000	ENSCGRG00001018841	Prpf38b	83	100.000	Cricetulus_griseus_chok1gshd
ENSCGRG00000002972	Prpf38b	96	89.195	ENSDORG00000025236	-	97	89.786	Dipodomys_ordii
ENSCGRG00000002972	Prpf38b	100	91.189	ENSFDAG00000021009	PRPF38B	84	92.291	Fukomys_damarensis
ENSCGRG00000002972	Prpf38b	100	92.291	ENSGGOG00000011288	PRPF38B	83	92.511	Gorilla_gorilla
ENSCGRG00000002972	Prpf38b	100	85.055	ENSMGAG00000006188	PRPF38B	91	85.055	Meleagris_gallopavo
ENSCGRG00000002972	Prpf38b	100	97.345	ENSMAUG00000019131	Prpf38b	83	97.345	Mesocricetus_auratus
ENSCGRG00000002972	Prpf38b	100	95.575	MGP_CAROLIEiJ_G0025542	Prpf38b	83	95.575	Mus_caroli
ENSCGRG00000002972	Prpf38b	100	95.133	ENSMUSG00000027881	Prpf38b	83	95.133	Mus_musculus
ENSCGRG00000002972	Prpf38b	100	96.239	MGP_PahariEiJ_G0026988	Prpf38b	83	96.239	Mus_pahari
ENSCGRG00000002972	Prpf38b	100	95.575	MGP_SPRETEiJ_G0026492	Prpf38b	83	95.575	Mus_spretus
ENSCGRG00000002972	Prpf38b	100	88.106	ENSNLEG00000030268	-	83	87.004	Nomascus_leucogenys
ENSCGRG00000002972	Prpf38b	100	92.291	ENSNLEG00000001645	-	83	92.511	Nomascus_leucogenys
ENSCGRG00000002972	Prpf38b	100	92.291	ENSPPAG00000001260	PRPF38B	83	92.511	Pan_paniscus
ENSCGRG00000002972	Prpf38b	100	90.549	ENSPPRG00000002116	PRPF38B	83	89.231	Panthera_pardus
ENSCGRG00000002972	Prpf38b	100	92.291	ENSPTRG00000001032	PRPF38B	83	92.511	Pan_troglodytes
ENSCGRG00000002972	Prpf38b	100	90.529	ENSPANG00000007560	PRPF38B	83	92.731	Papio_anubis
ENSCGRG00000002972	Prpf38b	100	90.308	ENSPVAG00000011929	-	83	92.731	Pteropus_vampyrus
ENSCGRG00000002972	Prpf38b	100	92.070	ENSSARG00000012818	-	83	92.952	Sorex_araneus
ENSCGRG00000002972	Prpf38b	73	86.364	ENSTGUG00000004594	-	50	93.590	Taeniopygia_guttata
ENSCGRG00000002972	Prpf38b	100	90.549	ENSUAMG00000023817	PRPF38B	83	91.429	Ursus_americanus