EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00000003118 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf1
Alias: -
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Cricetulus_griseus_crigri
Status: putative
Strand: Plus strand
Length: 13134 bases
Position: chrJH000832.1:177975-191108
Accession: 100761673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00000004238	CPSF_A	PF03178.15	2e-92	1	1
ENSCGRP00000004237	CPSF_A	PF03178.15	4.3e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00000004321	-	4239	XM_007648233	ENSCGRP00000004238	1412 (aa)	XP_007646423	-
ENSCGRT00000004320	-	4254	-	ENSCGRP00000004237	1417 (aa)	-	-

Gene Model

Click here to download ENSCGRG00000003118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00000003118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00000003118	Cpsf1	100	94.456	ENSG00000071894	CPSF1	100	94.456	Homo_sapiens
ENSCGRG00000003118	Cpsf1	100	77.527	ENSAPOG00000019621	cpsf1	100	76.335	Acanthochromis_polyacanthus
ENSCGRG00000003118	Cpsf1	97	91.851	ENSAMEG00000005557	CPSF1	100	91.851	Ailuropoda_melanoleuca
ENSCGRG00000003118	Cpsf1	100	76.593	ENSACIG00000006112	cpsf1	100	76.870	Amphilophus_citrinellus
ENSCGRG00000003118	Cpsf1	100	77.464	ENSAOCG00000007120	cpsf1	100	77.739	Amphiprion_ocellaris
ENSCGRG00000003118	Cpsf1	100	78.015	ENSAPEG00000005755	cpsf1	100	78.153	Amphiprion_percula
ENSCGRG00000003118	Cpsf1	100	75.911	ENSATEG00000011097	cpsf1	100	76.383	Anabas_testudineus
ENSCGRG00000003118	Cpsf1	93	79.151	ENSACAG00000009655	CPSF1	100	79.151	Anolis_carolinensis
ENSCGRG00000003118	Cpsf1	100	94.383	ENSANAG00000036514	CPSF1	100	94.383	Aotus_nancymaae
ENSCGRG00000003118	Cpsf1	100	75.554	ENSACLG00000012231	cpsf1	99	77.254	Astatotilapia_calliptera
ENSCGRG00000003118	Cpsf1	100	72.337	ENSAMXG00000008485	cpsf1	100	72.337	Astyanax_mexicanus
ENSCGRG00000003118	Cpsf1	100	91.967	ENSBTAG00000008355	CPSF1	100	91.931	Bos_taurus
ENSCGRG00000003118	Cpsf1	100	31.923	WBGene00022301	cpsf-1	100	40.000	Caenorhabditis_elegans
ENSCGRG00000003118	Cpsf1	100	94.452	ENSCJAG00000021421	CPSF1	100	94.452	Callithrix_jacchus
ENSCGRG00000003118	Cpsf1	97	93.777	ENSCAFG00000001600	CPSF1	100	93.562	Canis_familiaris
ENSCGRG00000003118	Cpsf1	100	93.975	ENSCAFG00020020821	CPSF1	100	93.767	Canis_lupus_dingo
ENSCGRG00000003118	Cpsf1	100	88.280	ENSCHIG00000015833	CPSF1	100	88.072	Capra_hircus
ENSCGRG00000003118	Cpsf1	100	95.146	ENSTSYG00000028560	CPSF1	98	97.661	Carlito_syrichta
ENSCGRG00000003118	Cpsf1	97	93.902	ENSCAPG00000014921	CPSF1	99	93.902	Cavia_aperea
ENSCGRG00000003118	Cpsf1	100	93.551	ENSCPOG00000011448	CPSF1	100	93.551	Cavia_porcellus
ENSCGRG00000003118	Cpsf1	100	94.521	ENSCCAG00000037658	CPSF1	100	94.521	Cebus_capucinus
ENSCGRG00000003118	Cpsf1	100	94.313	ENSCATG00000037234	CPSF1	100	97.612	Cercocebus_atys
ENSCGRG00000003118	Cpsf1	100	95.212	ENSCLAG00000012166	CPSF1	100	95.212	Chinchilla_lanigera
ENSCGRG00000003118	Cpsf1	100	94.383	ENSCSAG00000008502	CPSF1	100	94.383	Chlorocebus_sabaeus
ENSCGRG00000003118	Cpsf1	99	85.574	ENSCPBG00000018910	CPSF1	96	85.574	Chrysemys_picta_bellii
ENSCGRG00000003118	Cpsf1	96	47.997	ENSCING00000000514	-	100	47.926	Ciona_intestinalis
ENSCGRG00000003118	Cpsf1	99	47.698	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSCGRG00000003118	Cpsf1	99	89.662	ENSCANG00000032760	CPSF1	100	88.889	Colobus_angolensis_palliatus
ENSCGRG00000003118	Cpsf1	100	97.507	ENSCGRG00001016344	Cpsf1	100	97.507	Cricetulus_griseus_chok1gshd
ENSCGRG00000003118	Cpsf1	100	76.091	ENSCSEG00000013464	cpsf1	100	76.161	Cynoglossus_semilaevis
ENSCGRG00000003118	Cpsf1	85	74.494	ENSCVAG00000014059	cpsf1	100	75.926	Cyprinodon_variegatus
ENSCGRG00000003118	Cpsf1	100	77.770	ENSDARG00000034178	cpsf1	100	77.839	Danio_rerio
ENSCGRG00000003118	Cpsf1	69	96.522	ENSDNOG00000043654	CPSF1	94	96.522	Dasypus_novemcinctus
ENSCGRG00000003118	Cpsf1	97	94.046	ENSDORG00000006278	Cpsf1	99	94.220	Dipodomys_ordii
ENSCGRG00000003118	Cpsf1	100	44.602	FBgn0024698	Cpsf160	100	44.497	Drosophila_melanogaster
ENSCGRG00000003118	Cpsf1	80	97.987	ENSETEG00000006022	CPSF1	83	97.987	Echinops_telfairi
ENSCGRG00000003118	Cpsf1	100	94.460	ENSEASG00005010774	CPSF1	100	94.460	Equus_asinus_asinus
ENSCGRG00000003118	Cpsf1	100	94.460	ENSECAG00000022209	CPSF1	100	94.460	Equus_caballus
ENSCGRG00000003118	Cpsf1	100	92.388	ENSEEUG00000000471	CPSF1	100	92.388	Erinaceus_europaeus
ENSCGRG00000003118	Cpsf1	100	76.011	ENSELUG00000012271	cpsf1	100	76.588	Esox_lucius
ENSCGRG00000003118	Cpsf1	100	95.142	ENSFDAG00000016060	CPSF1	100	95.142	Fukomys_damarensis
ENSCGRG00000003118	Cpsf1	100	74.914	ENSFHEG00000016801	cpsf1	100	75.121	Fundulus_heteroclitus
ENSCGRG00000003118	Cpsf1	100	76.154	ENSGMOG00000000796	cpsf1	100	76.361	Gadus_morhua
ENSCGRG00000003118	Cpsf1	95	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSCGRG00000003118	Cpsf1	100	76.823	ENSGACG00000008703	cpsf1	100	76.818	Gasterosteus_aculeatus
ENSCGRG00000003118	Cpsf1	100	82.076	ENSGAGG00000004276	CPSF1	98	85.306	Gopherus_agassizii
ENSCGRG00000003118	Cpsf1	100	94.379	ENSGGOG00000016185	CPSF1	100	94.379	Gorilla_gorilla
ENSCGRG00000003118	Cpsf1	100	77.770	ENSHBUG00000018900	cpsf1	100	78.116	Haplochromis_burtoni
ENSCGRG00000003118	Cpsf1	100	95.212	ENSHGLG00000016139	CPSF1	100	95.212	Heterocephalus_glaber_female
ENSCGRG00000003118	Cpsf1	100	95.142	ENSHGLG00100009750	CPSF1	100	95.142	Heterocephalus_glaber_male
ENSCGRG00000003118	Cpsf1	100	75.373	ENSHCOG00000018509	cpsf1	100	75.492	Hippocampus_comes
ENSCGRG00000003118	Cpsf1	100	74.278	ENSIPUG00000011259	cpsf1	100	74.278	Ictalurus_punctatus
ENSCGRG00000003118	Cpsf1	97	94.711	ENSSTOG00000009957	CPSF1	99	94.711	Ictidomys_tridecemlineatus
ENSCGRG00000003118	Cpsf1	100	95.350	ENSJJAG00000023002	Cpsf1	100	95.350	Jaculus_jaculus
ENSCGRG00000003118	Cpsf1	91	85.893	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSCGRG00000003118	Cpsf1	100	75.156	ENSLBEG00000003601	cpsf1	100	75.745	Labrus_bergylta
ENSCGRG00000003118	Cpsf1	87	78.846	ENSLACG00000000233	CPSF1	92	78.846	Latimeria_chalumnae
ENSCGRG00000003118	Cpsf1	100	76.727	ENSLOCG00000008484	cpsf1	100	76.865	Lepisosteus_oculatus
ENSCGRG00000003118	Cpsf1	97	92.913	ENSLAFG00000022601	CPSF1	100	92.699	Loxodonta_africana
ENSCGRG00000003118	Cpsf1	100	94.313	ENSMFAG00000037013	CPSF1	100	94.313	Macaca_fascicularis
ENSCGRG00000003118	Cpsf1	100	94.383	ENSMMUG00000007380	CPSF1	100	94.383	Macaca_mulatta
ENSCGRG00000003118	Cpsf1	97	94.333	ENSMNEG00000043564	CPSF1	100	94.333	Macaca_nemestrina
ENSCGRG00000003118	Cpsf1	100	94.313	ENSMLEG00000043010	CPSF1	100	97.313	Mandrillus_leucophaeus
ENSCGRG00000003118	Cpsf1	100	76.606	ENSMAMG00000003803	cpsf1	100	76.876	Mastacembelus_armatus
ENSCGRG00000003118	Cpsf1	100	75.623	ENSMZEG00005001168	cpsf1	100	75.970	Maylandia_zebra
ENSCGRG00000003118	Cpsf1	100	96.808	ENSMAUG00000003601	Cpsf1	100	96.808	Mesocricetus_auratus
ENSCGRG00000003118	Cpsf1	100	94.795	ENSMICG00000015767	CPSF1	100	94.795	Microcebus_murinus
ENSCGRG00000003118	Cpsf1	100	96.322	ENSMOCG00000022758	Cpsf1	100	96.322	Microtus_ochrogaster
ENSCGRG00000003118	Cpsf1	100	77.232	ENSMMOG00000021245	cpsf1	100	77.370	Mola_mola
ENSCGRG00000003118	Cpsf1	100	90.338	ENSMODG00000010755	CPSF1	100	90.338	Monodelphis_domestica
ENSCGRG00000003118	Cpsf1	100	76.032	ENSMALG00000020545	cpsf1	100	76.303	Monopterus_albus
ENSCGRG00000003118	Cpsf1	100	96.461	MGP_CAROLIEiJ_G0019936	Cpsf1	100	96.461	Mus_caroli
ENSCGRG00000003118	Cpsf1	100	96.322	ENSMUSG00000034022	Cpsf1	100	96.322	Mus_musculus
ENSCGRG00000003118	Cpsf1	100	96.391	MGP_PahariEiJ_G0019946	Cpsf1	100	96.391	Mus_pahari
ENSCGRG00000003118	Cpsf1	100	96.391	MGP_SPRETEiJ_G0020839	Cpsf1	100	96.391	Mus_spretus
ENSCGRG00000003118	Cpsf1	93	93.032	ENSMPUG00000006419	CPSF1	93	92.809	Mustela_putorius_furo
ENSCGRG00000003118	Cpsf1	100	95.489	ENSNGAG00000022460	Cpsf1	100	95.489	Nannospalax_galili
ENSCGRG00000003118	Cpsf1	100	73.218	ENSNBRG00000000813	cpsf1	100	73.218	Neolamprologus_brichardi
ENSCGRG00000003118	Cpsf1	86	80.803	ENSNLEG00000010633	-	100	88.426	Nomascus_leucogenys
ENSCGRG00000003118	Cpsf1	82	97.674	ENSMEUG00000014922	CPSF1	85	97.674	Notamacropus_eugenii
ENSCGRG00000003118	Cpsf1	60	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSCGRG00000003118	Cpsf1	100	95.350	ENSODEG00000013995	CPSF1	100	95.350	Octodon_degus
ENSCGRG00000003118	Cpsf1	100	78.324	ENSONIG00000007676	cpsf1	100	78.463	Oreochromis_niloticus
ENSCGRG00000003118	Cpsf1	57	92.143	ENSOANG00000010716	CPSF1	88	92.143	Ornithorhynchus_anatinus
ENSCGRG00000003118	Cpsf1	100	75.799	ENSORLG00000013544	cpsf1	92	86.831	Oryzias_latipes
ENSCGRG00000003118	Cpsf1	100	75.799	ENSORLG00020021693	cpsf1	92	86.831	Oryzias_latipes_hni
ENSCGRG00000003118	Cpsf1	100	75.782	ENSORLG00015009979	cpsf1	100	75.714	Oryzias_latipes_hsok
ENSCGRG00000003118	Cpsf1	100	75.545	ENSOMEG00000011849	cpsf1	100	76.022	Oryzias_melastigma
ENSCGRG00000003118	Cpsf1	100	94.868	ENSOGAG00000000315	CPSF1	100	94.868	Otolemur_garnettii
ENSCGRG00000003118	Cpsf1	100	94.383	ENSPPAG00000019280	CPSF1	100	94.383	Pan_paniscus
ENSCGRG00000003118	Cpsf1	100	92.774	ENSPTRG00000051253	-	100	92.774	Pan_troglodytes
ENSCGRG00000003118	Cpsf1	100	94.383	ENSPTRG00000049288	-	100	94.383	Pan_troglodytes
ENSCGRG00000003118	Cpsf1	97	94.189	ENSPANG00000015005	CPSF1	100	94.189	Papio_anubis
ENSCGRG00000003118	Cpsf1	100	78.893	ENSPKIG00000002582	cpsf1	100	79.287	Paramormyrops_kingsleyae
ENSCGRG00000003118	Cpsf1	100	90.269	ENSPCIG00000009035	CPSF1	100	90.269	Phascolarctos_cinereus
ENSCGRG00000003118	Cpsf1	100	74.408	ENSPFOG00000012870	cpsf1	100	74.475	Poecilia_formosa
ENSCGRG00000003118	Cpsf1	100	73.951	ENSPREG00000016307	cpsf1	100	74.222	Poecilia_reticulata
ENSCGRG00000003118	Cpsf1	100	86.408	ENSPPYG00000018973	CPSF1	100	86.408	Pongo_abelii
ENSCGRG00000003118	Cpsf1	91	95.170	ENSPCAG00000011541	CPSF1	94	95.170	Procavia_capensis
ENSCGRG00000003118	Cpsf1	100	91.054	ENSPCOG00000020001	CPSF1	100	91.054	Propithecus_coquereli
ENSCGRG00000003118	Cpsf1	90	98.857	ENSPVAG00000006761	CPSF1	91	98.857	Pteropus_vampyrus
ENSCGRG00000003118	Cpsf1	100	76.760	ENSPNYG00000004906	cpsf1	100	77.102	Pundamilia_nyererei
ENSCGRG00000003118	Cpsf1	100	73.412	ENSPNAG00000024395	cpsf1	100	73.412	Pygocentrus_nattereri
ENSCGRG00000003118	Cpsf1	100	96.738	ENSRNOG00000030705	Cpsf1	100	96.738	Rattus_norvegicus
ENSCGRG00000003118	Cpsf1	100	94.313	ENSRBIG00000044907	CPSF1	100	97.612	Rhinopithecus_bieti
ENSCGRG00000003118	Cpsf1	100	94.313	ENSRROG00000044861	CPSF1	100	97.612	Rhinopithecus_roxellana
ENSCGRG00000003118	Cpsf1	97	94.261	ENSSBOG00000027177	CPSF1	100	94.261	Saimiri_boliviensis_boliviensis
ENSCGRG00000003118	Cpsf1	100	90.269	ENSSHAG00000006500	CPSF1	100	90.269	Sarcophilus_harrisii
ENSCGRG00000003118	Cpsf1	100	76.775	ENSSFOG00015004606	cpsf1	100	79.767	Scleropages_formosus
ENSCGRG00000003118	Cpsf1	100	76.032	ENSSMAG00000020547	cpsf1	100	76.371	Scophthalmus_maximus
ENSCGRG00000003118	Cpsf1	100	77.524	ENSSDUG00000001100	cpsf1	100	77.801	Seriola_dumerili
ENSCGRG00000003118	Cpsf1	100	77.785	ENSSLDG00000003619	cpsf1	100	77.924	Seriola_lalandi_dorsalis
ENSCGRG00000003118	Cpsf1	89	97.917	ENSSARG00000003643	CPSF1	92	97.917	Sorex_araneus
ENSCGRG00000003118	Cpsf1	96	85.436	ENSSPUG00000014396	CPSF1	100	85.436	Sphenodon_punctatus
ENSCGRG00000003118	Cpsf1	100	76.319	ENSSPAG00000005349	cpsf1	100	76.522	Stegastes_partitus
ENSCGRG00000003118	Cpsf1	100	92.867	ENSSSCG00000005906	CPSF1	100	92.867	Sus_scrofa
ENSCGRG00000003118	Cpsf1	96	76.277	ENSTRUG00000013134	cpsf1	99	76.347	Takifugu_rubripes
ENSCGRG00000003118	Cpsf1	100	76.907	ENSTNIG00000014027	cpsf1	100	76.976	Tetraodon_nigroviridis
ENSCGRG00000003118	Cpsf1	78	88.448	ENSTBEG00000001756	CPSF1	91	88.448	Tupaia_belangeri
ENSCGRG00000003118	Cpsf1	90	97.064	ENSTTRG00000001937	CPSF1	90	97.064	Tursiops_truncatus
ENSCGRG00000003118	Cpsf1	97	93.777	ENSUAMG00000006476	CPSF1	98	93.777	Ursus_americanus
ENSCGRG00000003118	Cpsf1	100	75.363	ENSXCOG00000003608	cpsf1	100	75.640	Xiphophorus_couchianus
ENSCGRG00000003118	Cpsf1	100	74.845	ENSXMAG00000005798	cpsf1	100	75.259	Xiphophorus_maculatus